RNA–Protein interactions for RNA: ENST00000590034.2

SF3A2-205, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 3

Gene SF3A2, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-205ENST00000590034 TSPOP30536 169 aa9.72□□□□□ -0.85
SF3A2-205ENST00000590034 SLC25A39Q9BZJ4 359 aaPredicted RBP9.72□□□□□ -0.85
SF3A2-205ENST00000590034 MCUBQ9NWR8 336 aa9.72□□□□□ -0.85
SF3A2-205ENST00000590034 PAIP2BQ9ULR5 123 aaKnown RBP9.72□□□□□ -0.85
SF3A2-205ENST00000590034 SLC45A2Q9UMX9 530 aa9.72□□□□□ -0.85
SF3A2-205ENST00000590034 PRB4P10163 310 aaPredicted RBP9.71□□□□□ -0.86
SF3A2-205ENST00000590034 ORM2P19652 201 aa9.71□□□□□ -0.86
SF3A2-205ENST00000590034 RAB11AP62491 216 aa9.71□□□□□ -0.86
SF3A2-205ENST00000590034 SRPXP78539 464 aa9.71□□□□□ -0.86
SF3A2-205ENST00000590034 GGNBP1Q5YKI7 109 aa9.71□□□□□ -0.86
SF3A2-205ENST00000590034 OR4D5Q8NGN0 318 aa9.71□□□□□ -0.86
SF3A2-205ENST00000590034 OR1B1Q8NGR6 318 aa9.71□□□□□ -0.86
SF3A2-205ENST00000590034 RNF141Q8WVD5 230 aa9.71□□□□□ -0.86
SF3A2-205ENST00000590034 SCGB3A2Q96PL1 93 aa9.71□□□□□ -0.86
SF3A2-205ENST00000590034 KRTAP1-5Q9BYS1 174 aa9.71□□□□□ -0.86
SF3A2-205ENST00000590034 BOLA2-SMG1P6H3BVE0 249 aa9.7□□□□□ -0.86
SF3A2-205ENST00000590034 DUSP14O95147 198 aaKnown RBP9.7□□□□□ -0.86
SF3A2-205ENST00000590034 CFDP00746 253 aaPredicted RBP9.7□□□□□ -0.86
SF3A2-205ENST00000590034 ANXA3P12429 323 aa9.7□□□□□ -0.86
SF3A2-205ENST00000590034 GPR141Q7Z602 305 aa9.7□□□□□ -0.86
SF3A2-205ENST00000590034 DUXBA0A1W2PPF3 345 aa9.69□□□□□ -0.86
SF3A2-205ENST00000590034 H3BRN7 92 aa9.69□□□□□ -0.86
SF3A2-205ENST00000590034 ATP5G1P05496 136 aa9.69□□□□□ -0.86
SF3A2-205ENST00000590034 ATP5G3P48201 142 aa9.69□□□□□ -0.86
SF3A2-205ENST00000590034 CCL18P55774 89 aa9.69□□□□□ -0.86
SF3A2-205ENST00000590034 FGL1Q08830 312 aa9.69□□□□□ -0.86
SF3A2-205ENST00000590034 ACOT7LQ6ZUV0 252 aa9.69□□□□□ -0.86
SF3A2-205ENST00000590034 TMED4Q7Z7H5 227 aa9.69□□□□□ -0.86
SF3A2-205ENST00000590034 Q8N1X5 172 aa9.69□□□□□ -0.86
SF3A2-205ENST00000590034 LRTM2Q8N967 370 aa9.69□□□□□ -0.86
SF3A2-205ENST00000590034 ZNF738Q8NE65 137 aa9.69□□□□□ -0.86
SF3A2-205ENST00000590034 BPIFCQ8NFQ6 507 aa9.69□□□□□ -0.86
SF3A2-205ENST00000590034 DYNC2LI1Q8TCX1 351 aa9.69□□□□□ -0.86
SF3A2-205ENST00000590034 GPR82Q96P67 336 aa9.69□□□□□ -0.86
SF3A2-205ENST00000590034 TMEM147Q9BVK8 224 aa9.69□□□□□ -0.86
SF3A2-205ENST00000590034 CBY3A6NI87 242 aa9.68□□□□□ -0.86
SF3A2-205ENST00000590034 H3BP45 60 aa9.68□□□□□ -0.86
SF3A2-205ENST00000590034 WRBO00258 174 aa9.68□□□□□ -0.86
SF3A2-205ENST00000590034 SYNGR2O43760 224 aa9.68□□□□□ -0.86
SF3A2-205ENST00000590034 SLC25A6P12236 298 aa9.68□□□□□ -0.86
SF3A2-205ENST00000590034 B2MP61769 119 aa9.68□□□□□ -0.86
SF3A2-205ENST00000590034 HIST1H1AQ02539 215 aaPredicted RBP9.68□□□□□ -0.86
SF3A2-205ENST00000590034 SSX7Q7RTT5 188 aa9.68□□□□□ -0.86
SF3A2-205ENST00000590034 SPATA12Q7Z6I5 190 aa9.68□□□□□ -0.86
SF3A2-205ENST00000590034 LINC01587Q99440 93 aa9.68□□□□□ -0.86
SF3A2-205ENST00000590034 SOSTQ9BQB4 213 aa9.68□□□□□ -0.86
SF3A2-205ENST00000590034 SHANK2-AS3Q9BTD1 123 aa9.68□□□□□ -0.86
SF3A2-205ENST00000590034 CCDC59Q9P031 241 aaKnown RBP9.68□□□□□ -0.86
SF3A2-205ENST00000590034 RABL2AQ9UBK7 228 aaPredicted RBP9.68□□□□□ -0.86
SF3A2-205ENST00000590034 RABL2BQ9UNT1 228 aa9.68□□□□□ -0.86
SF3A2-205ENST00000590034 CXCL3P19876 107 aa9.67□□□□□ -0.86
SF3A2-205ENST00000590034 TAS2R60P59551 318 aa9.67□□□□□ -0.86
SF3A2-205ENST00000590034 AKR1C1Q04828 323 aa9.67□□□□□ -0.86
SF3A2-205ENST00000590034 TMEM128Q5BJH2 165 aa9.67□□□□□ -0.86
SF3A2-205ENST00000590034 SPANXN5Q5MJ07 72 aa9.67□□□□□ -0.86
SF3A2-205ENST00000590034 OR8A1Q8NGG7 326 aa9.67□□□□□ -0.86
SF3A2-205ENST00000590034 UHRF2Q96PU4 802 aa9.67□□□□□ -0.86
SF3A2-205ENST00000590034 CIB3Q96Q77 187 aaPredicted RBP9.67□□□□□ -0.86
SF3A2-205ENST00000590034 RSL24D1Q9UHA3 163 aaKnown RBP9.67□□□□□ -0.86
SF3A2-205ENST00000590034 MED6O75586 246 aa9.66□□□□□ -0.86
SF3A2-205ENST00000590034 HTN1P15515 57 aa9.66□□□□□ -0.86
SF3A2-205ENST00000590034 VAMP1P23763 118 aa9.66□□□□□ -0.86
SF3A2-205ENST00000590034 KRTAP10-2P60368 255 aa9.66□□□□□ -0.86
SF3A2-205ENST00000590034 KIR3DS1Q14943 382 aa9.66□□□□□ -0.86
SF3A2-205ENST00000590034 CYP2G1PQ6ZSU1 146 aa9.66□□□□□ -0.86
SF3A2-205ENST00000590034 TMEM144Q7Z5S9 345 aa9.66□□□□□ -0.86
SF3A2-205ENST00000590034 TMEM256Q8N2U0 113 aa9.66□□□□□ -0.86
SF3A2-205ENST00000590034 RNASE8Q8TDE3 154 aaKnown RBP9.66□□□□□ -0.86
SF3A2-205ENST00000590034 TRIM63Q969Q1 353 aa9.66□□□□□ -0.86
SF3A2-205ENST00000590034 C16orf74Q96GX8 76 aa9.66□□□□□ -0.86
SF3A2-205ENST00000590034 SLIRPQ9GZT3 109 aaKnown RBP9.66□□□□□ -0.86
SF3A2-205ENST00000590034 A0A087X0K7 114 aa9.65□□□□□ -0.86
SF3A2-205ENST00000590034 HOXB5P09067 269 aa9.65□□□□□ -0.86
SF3A2-205ENST00000590034 RPL7P18124 248 aaKnown RBP9.65□□□□□ -0.86
SF3A2-205ENST00000590034 TNFSF8P32971 234 aa9.65□□□□□ -0.86
SF3A2-205ENST00000590034 RHOBP62745 196 aa9.65□□□□□ -0.86
SF3A2-205ENST00000590034 RPP30P78346 268 aaKnown RBP9.65□□□□□ -0.86
SF3A2-205ENST00000590034 PPP1R1AQ13522 171 aa9.65□□□□□ -0.86
SF3A2-205ENST00000590034 CLINT1Q14677 625 aa9.65□□□□□ -0.86
SF3A2-205ENST00000590034 MRPS26Q9BYN8 205 aaKnown RBP9.65□□□□□ -0.86
SF3A2-205ENST00000590034 Q9H8V8 135 aa9.65□□□□□ -0.86
SF3A2-205ENST00000590034 NOP10Q9NPE3 64 aaKnown RBP9.65□□□□□ -0.86
SF3A2-205ENST00000590034 SCRT2Q9NQ03 307 aa9.65□□□□□ -0.86
SF3A2-205ENST00000590034 HIGD1AQ9Y241 93 aa9.65□□□□□ -0.86
SF3A2-205ENST00000590034 TIMM8BQ9Y5J9 83 aaPredicted RBP9.65□□□□□ -0.86
SF3A2-205ENST00000590034 HERC1Q15751 4861 aa9.65□□□□□ -0.86
SF3A2-205ENST00000590034 PIGBOS1A0A0B4J2F0 54 aa9.64□□□□□ -0.87
SF3A2-205ENST00000590034 PMS2P5A8MQ11 134 aa9.64□□□□□ -0.87
SF3A2-205ENST00000590034 MRPS12O15235 138 aaKnown RBP9.64□□□□□ -0.87
SF3A2-205ENST00000590034 CCNKO75909 580 aa9.64□□□□□ -0.87
SF3A2-205ENST00000590034 SFT2D2O95562 160 aa9.64□□□□□ -0.87
SF3A2-205ENST00000590034 IL5P05113 134 aa9.64□□□□□ -0.87
SF3A2-205ENST00000590034 LINC00869P0C866 280 aa9.64□□□□□ -0.87
SF3A2-205ENST00000590034 PLP1P60201 277 aa9.64□□□□□ -0.87
SF3A2-205ENST00000590034 PSG3Q16557 428 aa9.64□□□□□ -0.87
SF3A2-205ENST00000590034 LINC00612Q8N6U2 182 aa9.64□□□□□ -0.87
SF3A2-205ENST00000590034 TMEM263Q8WUH6 116 aaKnown RBP9.64□□□□□ -0.87
SF3A2-205ENST00000590034 STRAPQ9Y3F4 350 aaKnown RBP9.64□□□□□ -0.87
SF3A2-205ENST00000590034 TRAV26-1A0A087WT03 109 aa9.63□□□□□ -0.87
SF3A2-205ENST00000590034 SMCO3A2RU48 225 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 157.2 ms