RNA–Protein interactions for RNA: ENST00000589949.1

H3F3B-209, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 842 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-209ENST00000589949 GGNBP1Q5YKI7 109 aa12.85□□□□□ -0.35
H3F3B-209ENST00000589949 COQ8AQ8NI60 647 aa12.85□□□□□ -0.35
H3F3B-209ENST00000589949 PPP1R14BQ96C90 147 aa12.85□□□□□ -0.35
H3F3B-209ENST00000589949 PFDN2Q9UHV9 154 aa12.85□□□□□ -0.35
H3F3B-209ENST00000589949 C9orf170A2RU37 121 aa12.84□□□□□ -0.35
H3F3B-209ENST00000589949 H3BP45 60 aa12.84□□□□□ -0.35
H3F3B-209ENST00000589949 ISLRO14498 428 aa12.84□□□□□ -0.35
H3F3B-209ENST00000589949 SSNA1O43805 119 aa12.84□□□□□ -0.35
H3F3B-209ENST00000589949 ADAP1O75689 374 aa12.84□□□□□ -0.35
H3F3B-209ENST00000589949 FABP1P07148 127 aa12.84□□□□□ -0.35
H3F3B-209ENST00000589949 SPANXN5Q5MJ07 72 aa12.84□□□□□ -0.35
H3F3B-209ENST00000589949 IGFL4Q6B9Z1 124 aa12.84□□□□□ -0.35
H3F3B-209ENST00000589949 ZNF98A6NK75 572 aa12.83□□□□□ -0.36
H3F3B-209ENST00000589949 MED6O75586 246 aa12.83□□□□□ -0.36
H3F3B-209ENST00000589949 PSG9Q00887 426 aa12.83□□□□□ -0.36
H3F3B-209ENST00000589949 AMTNQ6UX39 209 aa12.83□□□□□ -0.36
H3F3B-209ENST00000589949 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.83□□□□□ -0.36
H3F3B-209ENST00000589949 C12orf45Q8N5I9 185 aaPredicted RBP12.83□□□□□ -0.36
H3F3B-209ENST00000589949 RSG1Q9BU20 258 aa12.83□□□□□ -0.36
H3F3B-209ENST00000589949 SLC25A22Q9H936 323 aa12.83□□□□□ -0.36
H3F3B-209ENST00000589949 DKK2Q9UBU2 259 aa12.83□□□□□ -0.36
H3F3B-209ENST00000589949 TRAV8-2A0A0B4J237 113 aa12.82□□□□□ -0.36
H3F3B-209ENST00000589949 SMIM9A6NGZ8 99 aa12.82□□□□□ -0.36
H3F3B-209ENST00000589949 A8MTW9 85 aa12.82□□□□□ -0.36
H3F3B-209ENST00000589949 PRM2P04554 102 aa12.82□□□□□ -0.36
H3F3B-209ENST00000589949 SPART-AS1P0CW21 52 aa12.82□□□□□ -0.36
H3F3B-209ENST00000589949 ORM2P19652 201 aa12.82□□□□□ -0.36
H3F3B-209ENST00000589949 FCN2Q15485 313 aa12.82□□□□□ -0.36
H3F3B-209ENST00000589949 FAM222AQ5U5X8 452 aa12.82□□□□□ -0.36
H3F3B-209ENST00000589949 ACOT7LQ6ZUV0 252 aa12.82□□□□□ -0.36
H3F3B-209ENST00000589949 AKAP14Q86UN6 197 aa12.82□□□□□ -0.36
H3F3B-209ENST00000589949 POM121L12Q8N7R1 296 aa12.82□□□□□ -0.36
H3F3B-209ENST00000589949 MITD1Q8WV92 249 aa12.82□□□□□ -0.36
H3F3B-209ENST00000589949 CIB3Q96Q77 187 aaPredicted RBP12.82□□□□□ -0.36
H3F3B-209ENST00000589949 RFNGQ9Y644 331 aa12.82□□□□□ -0.36
H3F3B-209ENST00000589949 FAT2Q9NYQ8 4349 aa12.81□□□□□ -0.36
H3F3B-209ENST00000589949 PIGBOS1A0A0B4J2F0 54 aa12.81□□□□□ -0.36
H3F3B-209ENST00000589949 CCNKO75909 580 aa12.81□□□□□ -0.36
H3F3B-209ENST00000589949 POLR2GP62487 172 aaKnown RBP eCLIP12.81□□□□□ -0.36
H3F3B-209ENST00000589949 ID3Q02535 119 aa12.81□□□□□ -0.36
H3F3B-209ENST00000589949 C16orf92Q96LL3 132 aa12.81□□□□□ -0.36
H3F3B-209ENST00000589949 NDUFAF3Q9BU61 184 aa12.81□□□□□ -0.36
H3F3B-209ENST00000589949 DNAH2Q9P225 4427 aa12.8□□□□□ -0.36
H3F3B-209ENST00000589949 A0A1B0GVY2 172 aa12.8□□□□□ -0.36
H3F3B-209ENST00000589949 TMEM189A5PLL7 270 aa12.8□□□□□ -0.36
H3F3B-209ENST00000589949 PMS2P5A8MQ11 134 aa12.8□□□□□ -0.36
H3F3B-209ENST00000589949 SPATA31B1PQ5VZV4 182 aa12.8□□□□□ -0.36
H3F3B-209ENST00000589949 EBLN2Q6P2I7 272 aa12.8□□□□□ -0.36
H3F3B-209ENST00000589949 RPRMQ9NS64 109 aa12.8□□□□□ -0.36
H3F3B-209ENST00000589949 DOK5Q9P104 306 aa12.8□□□□□ -0.36
H3F3B-209ENST00000589949 SLC45A2Q9UMX9 530 aa12.8□□□□□ -0.36
H3F3B-209ENST00000589949 STRAPQ9Y3F4 350 aaKnown RBP12.8□□□□□ -0.36
H3F3B-209ENST00000589949 DNAH17Q9UFH2 4485 aa12.8□□□□□ -0.36
H3F3B-209ENST00000589949 M0R2N4 97 aa12.79□□□□□ -0.36
H3F3B-209ENST00000589949 CFDP00746 253 aaPredicted RBP12.79□□□□□ -0.36
H3F3B-209ENST00000589949 GALR1P47211 349 aa12.79□□□□□ -0.36
H3F3B-209ENST00000589949 RPP30P78346 268 aaKnown RBP12.79□□□□□ -0.36
H3F3B-209ENST00000589949 AKR1C1Q04828 323 aa12.79□□□□□ -0.36
H3F3B-209ENST00000589949 TMEM144Q7Z5S9 345 aa12.79□□□□□ -0.36
H3F3B-209ENST00000589949 RNF182Q8N6D2 247 aa12.79□□□□□ -0.36
H3F3B-209ENST00000589949 BPIFCQ8NFQ6 507 aa12.79□□□□□ -0.36
H3F3B-209ENST00000589949 OR11H7Q8NGC8 314 aa12.79□□□□□ -0.36
H3F3B-209ENST00000589949 OR4D5Q8NGN0 318 aa12.79□□□□□ -0.36
H3F3B-209ENST00000589949 OR1B1Q8NGR6 318 aa12.79□□□□□ -0.36
H3F3B-209ENST00000589949 YTHDF2Q9Y5A9 579 aaKnown RBP12.79□□□□□ -0.36
H3F3B-209ENST00000589949 LOC102723971A0A1B0GUV8 181 aa12.78□□□□□ -0.36
H3F3B-209ENST00000589949 H3BRN7 92 aa12.78□□□□□ -0.36
H3F3B-209ENST00000589949 RTL8CO15255 209 aa12.78□□□□□ -0.36
H3F3B-209ENST00000589949 CRXO43186 299 aaPredicted RBP12.78□□□□□ -0.36
H3F3B-209ENST00000589949 P0DMU3 169 aa12.78□□□□□ -0.36
H3F3B-209ENST00000589949 FAM231AP0DMU4 169 aa12.78□□□□□ -0.36
H3F3B-209ENST00000589949 FAM231CP0DMU5 169 aa12.78□□□□□ -0.36
H3F3B-209ENST00000589949 PRB4P10163 310 aaPredicted RBP12.78□□□□□ -0.36
H3F3B-209ENST00000589949 MEOX2P50222 304 aa12.78□□□□□ -0.36
H3F3B-209ENST00000589949 ST6GAL2Q96JF0 529 aa12.78□□□□□ -0.36
H3F3B-209ENST00000589949 NIPSNAP3BQ9BS92 247 aa12.78□□□□□ -0.36
H3F3B-209ENST00000589949 MGAT4CQ9UBM8 478 aa12.78□□□□□ -0.36
H3F3B-209ENST00000589949 GOLT1BQ9Y3E0 138 aa12.78□□□□□ -0.36
H3F3B-209ENST00000589949 M0R2Z0 102 aa12.77□□□□□ -0.37
H3F3B-209ENST00000589949 CXCL3P19876 107 aa12.77□□□□□ -0.37
H3F3B-209ENST00000589949 CNN1P51911 297 aaKnown RBP12.77□□□□□ -0.37
H3F3B-209ENST00000589949 CYP2G1PQ6ZSU1 146 aa12.77□□□□□ -0.37
H3F3B-209ENST00000589949 SHANK2-AS3Q9BTD1 123 aa12.77□□□□□ -0.37
H3F3B-209ENST00000589949 TMEM147Q9BVK8 224 aa12.77□□□□□ -0.37
H3F3B-209ENST00000589949 SLC25A39Q9BZJ4 359 aaPredicted RBP12.77□□□□□ -0.37
H3F3B-209ENST00000589949 PSENENQ9NZ42 101 aa12.77□□□□□ -0.37
H3F3B-209ENST00000589949 SSSCA1O60232 199 aa12.76□□□□□ -0.37
H3F3B-209ENST00000589949 HBE1P02100 147 aa12.76□□□□□ -0.37
H3F3B-209ENST00000589949 HTN3P15516 51 aa12.76□□□□□ -0.37
H3F3B-209ENST00000589949 SPINK13Q1W4C9 94 aa12.76□□□□□ -0.37
H3F3B-209ENST00000589949 IGF2BP2-AS1Q96M15 143 aa12.76□□□□□ -0.37
H3F3B-209ENST00000589949 UHRF2Q96PU4 802 aa12.76□□□□□ -0.37
H3F3B-209ENST00000589949 SMCO3A2RU48 225 aa12.75□□□□□ -0.37
H3F3B-209ENST00000589949 ZNF705GA8MUZ8 300 aaPredicted RBP12.75□□□□□ -0.37
H3F3B-209ENST00000589949 GOSR2O14653 212 aa12.75□□□□□ -0.37
H3F3B-209ENST00000589949 CD300CQ08708 224 aa12.75□□□□□ -0.37
H3F3B-209ENST00000589949 RRN3P1Q2M238 152 aa12.75□□□□□ -0.37
H3F3B-209ENST00000589949 SAMD13Q5VXD3 122 aa12.75□□□□□ -0.37
H3F3B-209ENST00000589949 PATE2Q6UY27 113 aa12.75□□□□□ -0.37
H3F3B-209ENST00000589949 TCTE3Q8IZS6 198 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms