RNA–Protein interactions for RNA: ENST00000589941.1

SMAD4-209, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-209ENST00000589941 KIR2DL5BA0A0G2JN68 375 aa5.88□□□□□ -1.47
SMAD4-209ENST00000589941 KIR2DL5BA0A0G2JPC4 375 aa5.88□□□□□ -1.47
SMAD4-209ENST00000589941 A0A1B0GX30 115 aa5.88□□□□□ -1.47
SMAD4-209ENST00000589941 PRSS47A8MTI9 375 aa5.88□□□□□ -1.47
SMAD4-209ENST00000589941 H7BYZ3 331 aa5.88□□□□□ -1.47
SMAD4-209ENST00000589941 TNFSF12O43508 249 aa5.88□□□□□ -1.47
SMAD4-209ENST00000589941 IAPPP10997 89 aa5.88□□□□□ -1.47
SMAD4-209ENST00000589941 GALR1P47211 349 aa5.88□□□□□ -1.47
SMAD4-209ENST00000589941 PSMB3P49720 205 aa5.88□□□□□ -1.47
SMAD4-209ENST00000589941 HNF4GQ14541 408 aa5.88□□□□□ -1.47
SMAD4-209ENST00000589941 SLC25A24Q6NUK1 477 aa5.88□□□□□ -1.47
SMAD4-209ENST00000589941 ACP7Q6ZNF0 438 aa5.88□□□□□ -1.47
SMAD4-209ENST00000589941 SSX9Q7RTT3 188 aa5.88□□□□□ -1.47
SMAD4-209ENST00000589941 KIR2DL5AQ8N109 375 aa5.88□□□□□ -1.47
SMAD4-209ENST00000589941 ZNF645Q8N7E2 425 aa5.88□□□□□ -1.47
SMAD4-209ENST00000589941 RNASE11Q8TAA1 199 aaKnown RBP5.88□□□□□ -1.47
SMAD4-209ENST00000589941 NEK7Q8TDX7 302 aa5.88□□□□□ -1.47
SMAD4-209ENST00000589941 C5orf30Q96GV9 206 aa5.88□□□□□ -1.47
SMAD4-209ENST00000589941 CIB3Q96Q77 187 aaPredicted RBP5.88□□□□□ -1.47
SMAD4-209ENST00000589941 SLC39A9Q9NUM3 307 aa5.88□□□□□ -1.47
SMAD4-209ENST00000589941 POLDIP2Q9Y2S7 368 aa5.88□□□□□ -1.47
SMAD4-209ENST00000589941 TMEM210A6NLX4 147 aa5.87□□□□□ -1.47
SMAD4-209ENST00000589941 HSPB6O14558 160 aa5.87□□□□□ -1.47
SMAD4-209ENST00000589941 OR2H2O95918 312 aa5.87□□□□□ -1.47
SMAD4-209ENST00000589941 ESDP10768 282 aa5.87□□□□□ -1.47
SMAD4-209ENST00000589941 NPPCP23582 126 aa5.87□□□□□ -1.47
SMAD4-209ENST00000589941 CEBPGP53567 150 aa5.87□□□□□ -1.47
SMAD4-209ENST00000589941 FGF8P55075 233 aaPredicted RBP5.87□□□□□ -1.47
SMAD4-209ENST00000589941 BRWD1-AS2P59051 145 aa5.87□□□□□ -1.47
SMAD4-209ENST00000589941 SPCS3P61009 180 aa5.87□□□□□ -1.47
SMAD4-209ENST00000589941 SELENOTP62341 195 aa5.87□□□□□ -1.47
SMAD4-209ENST00000589941 ADIRFQ15847 76 aa5.87□□□□□ -1.47
SMAD4-209ENST00000589941 IZUMO4Q1ZYL8 232 aa5.87□□□□□ -1.47
SMAD4-209ENST00000589941 ZNF664Q8N3J9 261 aa5.87□□□□□ -1.47
SMAD4-209ENST00000589941 GBGT1Q8N5D6 347 aa5.87□□□□□ -1.47
SMAD4-209ENST00000589941 ZNRF1Q8ND25 227 aa5.87□□□□□ -1.47
SMAD4-209ENST00000589941 OR2T10Q8NGZ9 312 aa5.87□□□□□ -1.47
SMAD4-209ENST00000589941 ZNF488Q96MN9 340 aa5.87□□□□□ -1.47
SMAD4-209ENST00000589941 OR5B12Q96R08 314 aa5.87□□□□□ -1.47
SMAD4-209ENST00000589941 RTL8AQ9BWD3 113 aa5.87□□□□□ -1.47
SMAD4-209ENST00000589941 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.87□□□□□ -1.47
SMAD4-209ENST00000589941 WDR83OSQ9Y284 106 aa5.87□□□□□ -1.47
SMAD4-209ENST00000589941 TBL2Q9Y4P3 447 aaKnown RBP5.87□□□□□ -1.47
SMAD4-209ENST00000589941 HMCN2Q8NDA2 5059 aa5.86□□□□□ -1.47
SMAD4-209ENST00000589941 IGKV1D-17A0A075B6S4 117 aa5.86□□□□□ -1.47
SMAD4-209ENST00000589941 UBE2L5PA0A1B0GUS4 154 aa5.86□□□□□ -1.47
SMAD4-209ENST00000589941 A0A1B0GV90 55 aa5.86□□□□□ -1.47
SMAD4-209ENST00000589941 ODAMA1E959 279 aa5.86□□□□□ -1.47
SMAD4-209ENST00000589941 XKRY2A2RUG3 117 aa5.86□□□□□ -1.47
SMAD4-209ENST00000589941 PRSS46E5RG02 174 aa5.86□□□□□ -1.47
SMAD4-209ENST00000589941 F6UZH7 168 aa5.86□□□□□ -1.47
SMAD4-209ENST00000589941 PDE6DO43924 150 aa5.86□□□□□ -1.47
SMAD4-209ENST00000589941 MPDU1O75352 247 aa5.86□□□□□ -1.47
SMAD4-209ENST00000589941 DLX6P56179 175 aa5.86□□□□□ -1.47
SMAD4-209ENST00000589941 YPEL3P61236 119 aaPredicted RBP5.86□□□□□ -1.47
SMAD4-209ENST00000589941 CATR1Q13166 79 aa5.86□□□□□ -1.47
SMAD4-209ENST00000589941 SPANXN5Q5MJ07 72 aa5.86□□□□□ -1.47
SMAD4-209ENST00000589941 BATF2Q8N1L9 274 aa5.86□□□□□ -1.47
SMAD4-209ENST00000589941 OR10G9Q8NGN4 311 aa5.86□□□□□ -1.47
SMAD4-209ENST00000589941 OR10G7Q8NGN6 311 aa5.86□□□□□ -1.47
SMAD4-209ENST00000589941 ST6GALNAC6Q969X2 333 aa5.86□□□□□ -1.47
SMAD4-209ENST00000589941 TMEM18Q96B42 140 aa5.86□□□□□ -1.47
SMAD4-209ENST00000589941 NPCDR1Q9BY65 106 aa5.86□□□□□ -1.47
SMAD4-209ENST00000589941 KCNIP2Q9NS61 270 aa5.86□□□□□ -1.47
SMAD4-209ENST00000589941 GAB2Q9UQC2 676 aa5.86□□□□□ -1.47
SMAD4-209ENST00000589941 PXMP4Q9Y6I8 212 aa5.86□□□□□ -1.47
SMAD4-209ENST00000589941 LY96Q9Y6Y9 160 aa5.86□□□□□ -1.47
SMAD4-209ENST00000589941 ARL2-SNX15V9GYD0 113 aa5.86□□□□□ -1.47
SMAD4-209ENST00000589941 TMEM30CPA0ZSE6 113 aa5.85□□□□□ -1.47
SMAD4-209ENST00000589941 C15orf62A8K5M9 175 aa5.85□□□□□ -1.47
SMAD4-209ENST00000589941 A8MZ25 164 aa5.85□□□□□ -1.47
SMAD4-209ENST00000589941 C17orf112F2Z3M2 114 aa5.85□□□□□ -1.47
SMAD4-209ENST00000589941 SH2D1BO14796 132 aa5.85□□□□□ -1.47
SMAD4-209ENST00000589941 RBFOX2O43251 390 aaKnown RBP eCLIP5.85□□□□□ -1.47
SMAD4-209ENST00000589941 SAP30O75446 220 aa5.85□□□□□ -1.47
SMAD4-209ENST00000589941 RD3LP0DJH9 198 aa5.85□□□□□ -1.47
SMAD4-209ENST00000589941 IGHV1-8P0DP01 117 aa5.85□□□□□ -1.47
SMAD4-209ENST00000589941 IL3RAP26951 378 aa5.85□□□□□ -1.47
SMAD4-209ENST00000589941 CD1BP29016 333 aa5.85□□□□□ -1.47
SMAD4-209ENST00000589941 NUTF2P61970 127 aaKnown RBP5.85□□□□□ -1.47
SMAD4-209ENST00000589941 RPL30P62888 115 aaKnown RBP5.85□□□□□ -1.47
SMAD4-209ENST00000589941 IQCJQ1A5X6 159 aa5.85□□□□□ -1.47
SMAD4-209ENST00000589941 PDZD11Q5EBL8 140 aa5.85□□□□□ -1.47
SMAD4-209ENST00000589941 FFAR4Q5NUL3 377 aa5.85□□□□□ -1.47
SMAD4-209ENST00000589941 C1orf194Q5T5A4 169 aa5.85□□□□□ -1.47
SMAD4-209ENST00000589941 FAM53AQ6NSI3 398 aaPredicted RBP5.85□□□□□ -1.47
SMAD4-209ENST00000589941 KCNIP4Q6PIL6 250 aa5.85□□□□□ -1.47
SMAD4-209ENST00000589941 LINC01551Q86U37 167 aa5.85□□□□□ -1.47
SMAD4-209ENST00000589941 MAPKAPK5-AS1Q8N8E1 139 aa5.85□□□□□ -1.47
SMAD4-209ENST00000589941 OR10P1Q8NGE3 313 aa5.85□□□□□ -1.47
SMAD4-209ENST00000589941 OR52E5Q8NH55 327 aa5.85□□□□□ -1.47
SMAD4-209ENST00000589941 DTD1Q8TEA8 209 aa5.85□□□□□ -1.47
SMAD4-209ENST00000589941 C11orf52Q96A22 123 aa5.85□□□□□ -1.47
SMAD4-209ENST00000589941 SLC25A22Q9H936 323 aa5.85□□□□□ -1.47
SMAD4-209ENST00000589941 C12orf77C9JDV5 145 aa5.84□□□□□ -1.47
SMAD4-209ENST00000589941 FNDC10F2Z333 226 aa5.84□□□□□ -1.47
SMAD4-209ENST00000589941 CDIPTO14735 213 aa5.84□□□□□ -1.47
SMAD4-209ENST00000589941 YPEL1O60688 119 aa5.84□□□□□ -1.47
SMAD4-209ENST00000589941 PAGE4O60829 102 aa5.84□□□□□ -1.47
SMAD4-209ENST00000589941 NXPH2O95156 264 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms