RNA–Protein interactions for RNA: ENST00000589677.5

SMARCA4-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-214ENST00000589677 TMEM8BA6NDV4 472 aa11.94□□□□□ -0.5
SMARCA4-214ENST00000589677 C20orf204Q6ZNR8 217 aa11.94□□□□□ -0.5
SMARCA4-214ENST00000589677 MYOFQ9NZM1 2061 aa11.94□□□□□ -0.5
SMARCA4-214ENST00000589677 GGNQ86UU5 652 aa11.93□□□□□ -0.5
SMARCA4-214ENST00000589677 SPACA3Q8IXA5 215 aa11.93□□□□□ -0.5
SMARCA4-214ENST00000589677 VCYO14598 125 aa11.93□□□□□ -0.5
SMARCA4-214ENST00000589677 FAM104BQ5XKR9 115 aa11.93□□□□□ -0.5
SMARCA4-214ENST00000589677 H3BMM0 161 aa11.93□□□□□ -0.5
SMARCA4-214ENST00000589677 C10orf55Q5SWW7 151 aa11.93□□□□□ -0.5
SMARCA4-214ENST00000589677 HAPLN4Q86UW8 402 aa11.93□□□□□ -0.5
SMARCA4-214ENST00000589677 UBE2WQ96B02 151 aa11.93□□□□□ -0.5
SMARCA4-214ENST00000589677 VWCEQ96DN2 955 aa11.93□□□□□ -0.5
SMARCA4-214ENST00000589677 DUX3Q96PT4 197 aa11.93□□□□□ -0.5
SMARCA4-214ENST00000589677 LHFPL4Q7Z7J7 247 aa11.93□□□□□ -0.5
SMARCA4-214ENST00000589677 RNASE8Q8TDE3 154 aaKnown RBP11.93□□□□□ -0.5
SMARCA4-214ENST00000589677 SPAARA0A1B0GVQ0 90 aa11.92□□□□□ -0.5
SMARCA4-214ENST00000589677 VGLL1Q99990 258 aa11.92□□□□□ -0.5
SMARCA4-214ENST00000589677 SPANXCQ9NY87 97 aa11.92□□□□□ -0.5
SMARCA4-214ENST00000589677 SMKR1H3BMG3 65 aa11.92□□□□□ -0.5
SMARCA4-214ENST00000589677 KLF5Q13887 457 aaPredicted RBP11.92□□□□□ -0.5
SMARCA4-214ENST00000589677 C1orf122Q6ZSJ8 110 aa11.92□□□□□ -0.5
SMARCA4-214ENST00000589677 TMEM75Q8N9X5 138 aa11.92□□□□□ -0.5
SMARCA4-214ENST00000589677 RNF5Q99942 180 aa11.92□□□□□ -0.5
SMARCA4-214ENST00000589677 IGHV3-64A0A075B6Q5 118 aa11.92□□□□□ -0.5
SMARCA4-214ENST00000589677 PRSS46E5RG02 174 aa11.92□□□□□ -0.5
SMARCA4-214ENST00000589677 CEND1Q8N111 149 aa11.92□□□□□ -0.5
SMARCA4-214ENST00000589677 CD177Q8N6Q3 437 aa11.92□□□□□ -0.5
SMARCA4-214ENST00000589677 RCHY1Q96PM5 261 aa11.92□□□□□ -0.5
SMARCA4-214ENST00000589677 ANK1P16157 1881 aa11.92□□□□□ -0.5
SMARCA4-214ENST00000589677 CLEC2AQ6UVW9 174 aa11.91□□□□□ -0.5
SMARCA4-214ENST00000589677 NEGR1Q7Z3B1 354 aa11.91□□□□□ -0.5
SMARCA4-214ENST00000589677 WIPF2Q8TF74 440 aaPredicted RBP11.91□□□□□ -0.5
SMARCA4-214ENST00000589677 ZNF688P0C7X2 276 aa11.91□□□□□ -0.5
SMARCA4-214ENST00000589677 PLAURQ03405 335 aa11.91□□□□□ -0.5
SMARCA4-214ENST00000589677 MPDZO75970 2070 aa11.91□□□□□ -0.5
SMARCA4-214ENST00000589677 SLC25A20O43772 301 aa11.9□□□□□ -0.5
SMARCA4-214ENST00000589677 GAGE12JA6NER3 117 aa11.9□□□□□ -0.5
SMARCA4-214ENST00000589677 GAGE7O76087 117 aa11.9□□□□□ -0.5
SMARCA4-214ENST00000589677 GAGE12FP0CL80 117 aa11.9□□□□□ -0.5
SMARCA4-214ENST00000589677 GAGE12GP0CL81 117 aa11.9□□□□□ -0.5
SMARCA4-214ENST00000589677 GAGE12IP0CL82 117 aa11.9□□□□□ -0.5
SMARCA4-214ENST00000589677 LTBRP36941 435 aa11.9□□□□□ -0.5
SMARCA4-214ENST00000589677 HIST1H4AP62805 103 aaKnown RBP11.9□□□□□ -0.5
SMARCA4-214ENST00000589677 GAGE4Q13068 117 aa11.9□□□□□ -0.5
SMARCA4-214ENST00000589677 PDE6HQ13956 83 aa11.9□□□□□ -0.5
SMARCA4-214ENST00000589677 TRGV11A0A075B6L2 103 aa11.9□□□□□ -0.5
SMARCA4-214ENST00000589677 MYMXA0A1B0GTQ4 84 aa11.9□□□□□ -0.5
SMARCA4-214ENST00000589677 CSRP1P21291 193 aaKnown RBP11.9□□□□□ -0.5
SMARCA4-214ENST00000589677 ARTNQ5T4W7 220 aa11.9□□□□□ -0.5
SMARCA4-214ENST00000589677 Q8N8P6 123 aa11.9□□□□□ -0.5
SMARCA4-214ENST00000589677 H0YJW9 148 aa11.9□□□□□ -0.5
SMARCA4-214ENST00000589677 DUSP14O95147 198 aaKnown RBP11.9□□□□□ -0.5
SMARCA4-214ENST00000589677 GAGE5Q13069 117 aa11.9□□□□□ -0.5
SMARCA4-214ENST00000589677 GAGE6Q13070 117 aa11.9□□□□□ -0.5
SMARCA4-214ENST00000589677 TRAV8-3A0A0A6YYJ7 113 aa11.9□□□□□ -0.51
SMARCA4-214ENST00000589677 E9PLN8 166 aa11.9□□□□□ -0.51
SMARCA4-214ENST00000589677 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.9□□□□□ -0.51
SMARCA4-214ENST00000589677 CENPVQ7Z7K6 275 aaPredicted RBP11.9□□□□□ -0.51
SMARCA4-214ENST00000589677 OR11H6Q8NGC7 330 aa11.9□□□□□ -0.51
SMARCA4-214ENST00000589677 C1QTNF4Q9BXJ3 329 aa11.9□□□□□ -0.51
SMARCA4-214ENST00000589677 IGKV1-39P01597 117 aa11.89□□□□□ -0.51
SMARCA4-214ENST00000589677 IGKV1D-39P04432 117 aa11.89□□□□□ -0.51
SMARCA4-214ENST00000589677 LY6EQ16553 131 aa11.89□□□□□ -0.51
SMARCA4-214ENST00000589677 PRDM6Q9NQX0 595 aa11.89□□□□□ -0.51
SMARCA4-214ENST00000589677 IGKV3D-20A0A0C4DH25 116 aa11.89□□□□□ -0.51
SMARCA4-214ENST00000589677 MYOD1P15172 320 aa11.89□□□□□ -0.51
SMARCA4-214ENST00000589677 CFHR2P36980 270 aa11.89□□□□□ -0.51
SMARCA4-214ENST00000589677 FAM27E3Q08E93 113 aa11.89□□□□□ -0.51
SMARCA4-214ENST00000589677 PRSS57Q6UWY2 283 aa11.89□□□□□ -0.51
SMARCA4-214ENST00000589677 BOD1L2Q8IYS8 172 aa11.89□□□□□ -0.51
SMARCA4-214ENST00000589677 IGHV1-18A0A0C4DH31 117 aa11.89□□□□□ -0.51
SMARCA4-214ENST00000589677 WIPF3A6NGB9 483 aa11.89□□□□□ -0.51
SMARCA4-214ENST00000589677 ABHD17AQ96GS6 310 aa11.89□□□□□ -0.51
SMARCA4-214ENST00000589677 SIGLEC15Q6ZMC9 328 aa11.88□□□□□ -0.51
SMARCA4-214ENST00000589677 ZCCHC24Q8N2G6 241 aaKnown RBP11.88□□□□□ -0.51
SMARCA4-214ENST00000589677 DNAJC13O75165 2243 aa11.88□□□□□ -0.51
SMARCA4-214ENST00000589677 C9orf106Q8NAJ2 232 aa11.88□□□□□ -0.51
SMARCA4-214ENST00000589677 H3BMG7 143 aa11.88□□□□□ -0.51
SMARCA4-214ENST00000589677 CFAP161Q6P656 301 aa11.88□□□□□ -0.51
SMARCA4-214ENST00000589677 Q6ZVH6 145 aa11.88□□□□□ -0.51
SMARCA4-214ENST00000589677 TMEM14BQ9NUH8 114 aa11.88□□□□□ -0.51
SMARCA4-214ENST00000589677 FOXG1P55316 489 aaPredicted RBP11.88□□□□□ -0.51
SMARCA4-214ENST00000589677 SHANK2-AS3Q9BTD1 123 aa11.88□□□□□ -0.51
SMARCA4-214ENST00000589677 METRNQ9UJH8 293 aa11.88□□□□□ -0.51
SMARCA4-214ENST00000589677 CRPP02741 224 aa11.87□□□□□ -0.51
SMARCA4-214ENST00000589677 LCNL1Q6ZST4 164 aa11.87□□□□□ -0.51
SMARCA4-214ENST00000589677 VWC2Q2TAL6 325 aa11.87□□□□□ -0.51
SMARCA4-214ENST00000589677 TMEM86BQ8N661 226 aa11.87□□□□□ -0.51
SMARCA4-214ENST00000589677 GLMPQ8WWB7 406 aa11.87□□□□□ -0.51
SMARCA4-214ENST00000589677 BSPH1Q075Z2 132 aa11.87□□□□□ -0.51
SMARCA4-214ENST00000589677 TMEM213A2RRL7 107 aa11.87□□□□□ -0.51
SMARCA4-214ENST00000589677 INAFM2P0DMQ5 153 aa11.87□□□□□ -0.51
SMARCA4-214ENST00000589677 ATP1A1-AS1Q5TC04 95 aa11.87□□□□□ -0.51
SMARCA4-214ENST00000589677 NEU4Q8WWR8 484 aaPredicted RBP11.87□□□□□ -0.51
SMARCA4-214ENST00000589677 LINC00477Q96M19 166 aa11.87□□□□□ -0.51
SMARCA4-214ENST00000589677 RLFQ13129 1914 aa11.87□□□□□ -0.51
SMARCA4-214ENST00000589677 TIMM23O14925 209 aa11.86□□□□□ -0.51
SMARCA4-214ENST00000589677 LINC00205P59089 165 aa11.86□□□□□ -0.51
SMARCA4-214ENST00000589677 MLANAQ16655 118 aa11.86□□□□□ -0.51
SMARCA4-214ENST00000589677 Q8TAT8 98 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 137.4 ms