RNA–Protein interactions for RNA: ENST00000589294.1

DNMT1-218, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-218ENST00000589294 UHRF2Q96PU4 802 aa9.17□□□□□ -0.94
DNMT1-218ENST00000589294 MRPL32Q9BYC8 188 aaKnown RBP9.17□□□□□ -0.94
DNMT1-218ENST00000589294 SH3BGRL3Q9H299 93 aa9.17□□□□□ -0.94
DNMT1-218ENST00000589294 RFNGQ9Y644 331 aa9.17□□□□□ -0.94
DNMT1-218ENST00000589294 ZNF785A8K8V0 405 aa9.16□□□□□ -0.94
DNMT1-218ENST00000589294 G3V4G9 280 aa9.16□□□□□ -0.94
DNMT1-218ENST00000589294 GALR1P47211 349 aa9.16□□□□□ -0.94
DNMT1-218ENST00000589294 RPL11P62913 178 aaKnown RBP9.16□□□□□ -0.94
DNMT1-218ENST00000589294 SIGLEC15Q6ZMC9 328 aa9.16□□□□□ -0.94
DNMT1-218ENST00000589294 TMEM61Q8N0U2 210 aa9.16□□□□□ -0.94
DNMT1-218ENST00000589294 OR10G4Q8NGN3 311 aa9.16□□□□□ -0.94
DNMT1-218ENST00000589294 OR10G9Q8NGN4 311 aa9.16□□□□□ -0.94
DNMT1-218ENST00000589294 OR10G7Q8NGN6 311 aa9.16□□□□□ -0.94
DNMT1-218ENST00000589294 SCRT1Q9BWW7 348 aa9.16□□□□□ -0.94
DNMT1-218ENST00000589294 SLC25A22Q9H936 323 aa9.16□□□□□ -0.94
DNMT1-218ENST00000589294 SEPSECSQ9HD40 501 aaKnown RBP9.16□□□□□ -0.94
DNMT1-218ENST00000589294 FUT9Q9Y231 359 aa9.16□□□□□ -0.94
DNMT1-218ENST00000589294 TRAV2A0A0B4J234 112 aa9.15□□□□□ -0.94
DNMT1-218ENST00000589294 A0A1W2PPV4 95 aa9.15□□□□□ -0.94
DNMT1-218ENST00000589294 IZUMO1RA6ND01 250 aa9.15□□□□□ -0.94
DNMT1-218ENST00000589294 UMAD1C9J7I0 102 aa9.15□□□□□ -0.94
DNMT1-218ENST00000589294 MEOX2P50222 304 aa9.15□□□□□ -0.94
DNMT1-218ENST00000589294 TMEM41BQ5BJD5 291 aa9.15□□□□□ -0.94
DNMT1-218ENST00000589294 AKR1C8PQ5T2L2 129 aa9.15□□□□□ -0.94
DNMT1-218ENST00000589294 KPRPQ5T749 579 aaPredicted RBP9.15□□□□□ -0.94
DNMT1-218ENST00000589294 LEMD1Q68G75 181 aa9.15□□□□□ -0.94
DNMT1-218ENST00000589294 BPIFA4PQ86YQ2 179 aa9.15□□□□□ -0.94
DNMT1-218ENST00000589294 RPP25LQ8N5L8 163 aaKnown RBP9.15□□□□□ -0.94
DNMT1-218ENST00000589294 STXBP6Q8NFX7 210 aa9.15□□□□□ -0.94
DNMT1-218ENST00000589294 SPAG8Q99932 426 aaPredicted RBP9.15□□□□□ -0.94
DNMT1-218ENST00000589294 RPRMQ9NS64 109 aa9.15□□□□□ -0.94
DNMT1-218ENST00000589294 TMEM14CQ9P0S9 112 aa9.15□□□□□ -0.94
DNMT1-218ENST00000589294 TRAV5A0A0B4J249 113 aa9.14□□□□□ -0.95
DNMT1-218ENST00000589294 OR4C46A6NHA9 309 aa9.14□□□□□ -0.95
DNMT1-218ENST00000589294 DNASE2O00115 360 aaPredicted RBP9.14□□□□□ -0.95
DNMT1-218ENST00000589294 CMC4P56277 68 aaPredicted RBP9.14□□□□□ -0.95
DNMT1-218ENST00000589294 TAS2R45P59539 299 aa9.14□□□□□ -0.95
DNMT1-218ENST00000589294 RAB2AP61019 212 aa9.14□□□□□ -0.95
DNMT1-218ENST00000589294 BEAN1Q3B7T3 259 aa9.14□□□□□ -0.95
DNMT1-218ENST00000589294 SAMD13Q5VXD3 122 aa9.14□□□□□ -0.95
DNMT1-218ENST00000589294 MORN5Q5VZ52 161 aa9.14□□□□□ -0.95
DNMT1-218ENST00000589294 ACTR3CQ9C0K3 210 aaPredicted RBP9.14□□□□□ -0.95
DNMT1-218ENST00000589294 MS4A6AQ9H2W1 248 aa9.14□□□□□ -0.95
DNMT1-218ENST00000589294 NRN1Q9NPD7 142 aa9.14□□□□□ -0.95
DNMT1-218ENST00000589294 SMAD5-AS1Q9Y6J3 95 aa9.14□□□□□ -0.95
DNMT1-218ENST00000589294 SORL1Q92673 2214 aa9.13□□□□□ -0.95
DNMT1-218ENST00000589294 BOLA2-SMG1P6H3BVE0 249 aa9.13□□□□□ -0.95
DNMT1-218ENST00000589294 MRPS12O15235 138 aaKnown RBP9.13□□□□□ -0.95
DNMT1-218ENST00000589294 GP9P14770 177 aa9.13□□□□□ -0.95
DNMT1-218ENST00000589294 RAB5CP51148 216 aa9.13□□□□□ -0.95
DNMT1-218ENST00000589294 GUCA2BQ16661 112 aa9.13□□□□□ -0.95
DNMT1-218ENST00000589294 GUK1Q16774 197 aa9.13□□□□□ -0.95
DNMT1-218ENST00000589294 DPPA3Q6W0C5 159 aa9.13□□□□□ -0.95
DNMT1-218ENST00000589294 MIR17HGQ75NE6 70 aa9.13□□□□□ -0.95
DNMT1-218ENST00000589294 TMED6Q8WW62 240 aa9.13□□□□□ -0.95
DNMT1-218ENST00000589294 PHYHIPLQ96FC7 376 aa9.13□□□□□ -0.95
DNMT1-218ENST00000589294 FAM167A-AS1Q96KT0 104 aa9.13□□□□□ -0.95
DNMT1-218ENST00000589294 ZNF256Q9Y2P7 627 aaPredicted RBP9.13□□□□□ -0.95
DNMT1-218ENST00000589294 BOLA1Q9Y3E2 137 aa9.13□□□□□ -0.95
DNMT1-218ENST00000589294 SELENOKQ9Y6D0 94 aa9.13□□□□□ -0.95
DNMT1-218ENST00000589294 IGKV3-7A0A075B6H7 116 aa9.12□□□□□ -0.95
DNMT1-218ENST00000589294 A0A087X0K7 114 aa9.12□□□□□ -0.95
DNMT1-218ENST00000589294 HIST1H1EP10412 219 aaKnown RBP9.12□□□□□ -0.95
DNMT1-218ENST00000589294 ATF4P18848 351 aaPredicted RBP9.12□□□□□ -0.95
DNMT1-218ENST00000589294 CDC34P49427 236 aaPredicted RBP9.12□□□□□ -0.95
DNMT1-218ENST00000589294 KRTAP10-11P60412 298 aa9.12□□□□□ -0.95
DNMT1-218ENST00000589294 KHDC3LQ587J8 217 aa9.12□□□□□ -0.95
DNMT1-218ENST00000589294 SPATA31B1PQ5VZV4 182 aa9.12□□□□□ -0.95
DNMT1-218ENST00000589294 FAM122CQ6P4D5 195 aa9.12□□□□□ -0.95
DNMT1-218ENST00000589294 PQLC2Q6ZP29 291 aa9.12□□□□□ -0.95
DNMT1-218ENST00000589294 GBGT1Q8N5D6 347 aa9.12□□□□□ -0.95
DNMT1-218ENST00000589294 DCANP1Q8TF63 244 aa9.12□□□□□ -0.95
DNMT1-218ENST00000589294 RAB24Q969Q5 203 aa9.12□□□□□ -0.95
DNMT1-218ENST00000589294 SLC25A2Q9BXI2 301 aa9.12□□□□□ -0.95
DNMT1-218ENST00000589294 OR51M1Q9H341 326 aa9.12□□□□□ -0.95
DNMT1-218ENST00000589294 HRH4Q9H3N8 390 aa9.12□□□□□ -0.95
DNMT1-218ENST00000589294 DNAH3Q8TD57 4116 aa9.11□□□□□ -0.95
DNMT1-218ENST00000589294 K7EQG2 157 aa9.11□□□□□ -0.95
DNMT1-218ENST00000589294 STAG3L2P0CL84 134 aa9.11□□□□□ -0.95
DNMT1-218ENST00000589294 STAG3L3P0CL85 134 aa9.11□□□□□ -0.95
DNMT1-218ENST00000589294 IGLC2P0DOY2 106 aa9.11□□□□□ -0.95
DNMT1-218ENST00000589294 RNF141Q8WVD5 230 aa9.11□□□□□ -0.95
DNMT1-218ENST00000589294 C17orf77Q96MU5 243 aa9.11□□□□□ -0.95
DNMT1-218ENST00000589294 FAM110AQ9BQ89 295 aa9.11□□□□□ -0.95
DNMT1-218ENST00000589294 PAXXQ9BUH6 204 aa9.11□□□□□ -0.95
DNMT1-218ENST00000589294 PLA2G2EQ9NZK7 142 aa9.11□□□□□ -0.95
DNMT1-218ENST00000589294 CTXND1A0A1B0GTU2 59 aa9.1□□□□□ -0.95
DNMT1-218ENST00000589294 ISLRO14498 428 aa9.1□□□□□ -0.95
DNMT1-218ENST00000589294 ID1P41134 155 aa9.1□□□□□ -0.95
DNMT1-218ENST00000589294 TFPI2P48307 235 aa9.1□□□□□ -0.95
DNMT1-218ENST00000589294 SULT1A2P50226 295 aa9.1□□□□□ -0.95
DNMT1-218ENST00000589294 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.1□□□□□ -0.95
DNMT1-218ENST00000589294 GTSCR1Q86UQ5 136 aa9.1□□□□□ -0.95
DNMT1-218ENST00000589294 WFDC3Q8IUB2 231 aa9.1□□□□□ -0.95
DNMT1-218ENST00000589294 CLEC5AQ9NY25 188 aa9.1□□□□□ -0.95
DNMT1-218ENST00000589294 TRBV19A0A075B6N1 114 aa9.09□□□□□ -0.95
DNMT1-218ENST00000589294 H3BQ15 152 aa9.09□□□□□ -0.95
DNMT1-218ENST00000589294 OR7C2O60412 319 aa9.09□□□□□ -0.95
DNMT1-218ENST00000589294 ZNF253O75346 499 aa9.09□□□□□ -0.95
DNMT1-218ENST00000589294 CXorf1O96002 111 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms