RNA–Protein interactions for RNA: ENST00000589216.1

PTPN2-208, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 3

Gene PTPN2, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-208ENST00000589216 NPVFQ9HCQ7 196 aa7.18□□□□□ -1.26
PTPN2-208ENST00000589216 HIGD1AQ9Y241 93 aa7.18□□□□□ -1.26
PTPN2-208ENST00000589216 WDR83OSQ9Y284 106 aa7.18□□□□□ -1.26
PTPN2-208ENST00000589216 HLA-DRB4X5D2U9 266 aa7.18□□□□□ -1.26
PTPN2-208ENST00000589216 SACSQ9NZJ4 4579 aa7.17□□□□□ -1.26
PTPN2-208ENST00000589216 MRPS12O15235 138 aaKnown RBP7.17□□□□□ -1.26
PTPN2-208ENST00000589216 HYPMO75409 117 aa7.17□□□□□ -1.26
PTPN2-208ENST00000589216 IGKV3-20P01619 116 aa7.17□□□□□ -1.26
PTPN2-208ENST00000589216 SPP1P10451 314 aa7.17□□□□□ -1.26
PTPN2-208ENST00000589216 GALR1P47211 349 aa7.17□□□□□ -1.26
PTPN2-208ENST00000589216 SULT1A1P50225 295 aa7.17□□□□□ -1.26
PTPN2-208ENST00000589216 DEFA1P59665 94 aa7.17□□□□□ -1.26
PTPN2-208ENST00000589216 DEFA3P59666 94 aa7.17□□□□□ -1.26
PTPN2-208ENST00000589216 SELENOTP62341 195 aa7.17□□□□□ -1.26
PTPN2-208ENST00000589216 VWC2Q2TAL6 325 aa7.17□□□□□ -1.26
PTPN2-208ENST00000589216 MIC13Q5XKP0 118 aa7.17□□□□□ -1.26
PTPN2-208ENST00000589216 ZNF546Q86UE3 836 aa7.17□□□□□ -1.26
PTPN2-208ENST00000589216 RNF182Q8N6D2 247 aa7.17□□□□□ -1.26
PTPN2-208ENST00000589216 Q8NAQ8 132 aa7.17□□□□□ -1.26
PTPN2-208ENST00000589216 CSNK1G2-AS1Q8NCQ2 148 aa7.17□□□□□ -1.26
PTPN2-208ENST00000589216 LINC00052Q96N35 136 aa7.17□□□□□ -1.26
PTPN2-208ENST00000589216 RSG1Q9BU20 258 aa7.17□□□□□ -1.26
PTPN2-208ENST00000589216 GGACTQ9BVM4 153 aa7.17□□□□□ -1.26
PTPN2-208ENST00000589216 ARV1Q9H2C2 271 aa7.17□□□□□ -1.26
PTPN2-208ENST00000589216 SEPSECSQ9HD40 501 aaKnown RBP7.17□□□□□ -1.26
PTPN2-208ENST00000589216 PFDN2Q9UHV9 154 aa7.17□□□□□ -1.26
PTPN2-208ENST00000589216 IGHV4-28A0A0C4DH34 117 aa7.16□□□□□ -1.26
PTPN2-208ENST00000589216 LCE6AA0A183 80 aa7.16□□□□□ -1.26
PTPN2-208ENST00000589216 ISLRO14498 428 aa7.16□□□□□ -1.26
PTPN2-208ENST00000589216 SNRPCP09234 159 aaKnown RBP7.16□□□□□ -1.26
PTPN2-208ENST00000589216 PVALBP20472 110 aaPredicted RBP7.16□□□□□ -1.26
PTPN2-208ENST00000589216 HLA-DMBP28068 263 aa7.16□□□□□ -1.26
PTPN2-208ENST00000589216 CAMLGP49069 296 aa7.16□□□□□ -1.26
PTPN2-208ENST00000589216 FXYD7P58549 80 aa7.16□□□□□ -1.26
PTPN2-208ENST00000589216 RAP2BP61225 183 aa7.16□□□□□ -1.26
PTPN2-208ENST00000589216 PRR20EP86478 221 aa7.16□□□□□ -1.26
PTPN2-208ENST00000589216 PRR20CP86479 221 aa7.16□□□□□ -1.26
PTPN2-208ENST00000589216 PRR20DP86480 221 aa7.16□□□□□ -1.26
PTPN2-208ENST00000589216 PRR20BP86481 221 aa7.16□□□□□ -1.26
PTPN2-208ENST00000589216 PRR20AP86496 221 aa7.16□□□□□ -1.26
PTPN2-208ENST00000589216 MORN3Q6PF18 240 aaPredicted RBP7.16□□□□□ -1.26
PTPN2-208ENST00000589216 ZNF709Q8N972 641 aa7.16□□□□□ -1.26
PTPN2-208ENST00000589216 TMEM37Q8WXS4 190 aa7.16□□□□□ -1.26
PTPN2-208ENST00000589216 C11orf68Q9H3H3 251 aaKnown RBP7.16□□□□□ -1.26
PTPN2-208ENST00000589216 SAV1Q9H4B6 383 aaPredicted RBP7.16□□□□□ -1.26
PTPN2-208ENST00000589216 UQCC1Q9NVA1 299 aa7.16□□□□□ -1.26
PTPN2-208ENST00000589216 XCL2Q9UBD3 114 aa7.16□□□□□ -1.26
PTPN2-208ENST00000589216 X6R8D5 127 aa7.16□□□□□ -1.26
PTPN2-208ENST00000589216 A0A0J9YX75 114 aa7.15□□□□□ -1.26
PTPN2-208ENST00000589216 CXorf65A6NEN9 183 aa7.15□□□□□ -1.26
PTPN2-208ENST00000589216 ZNF705EA8MWA4 302 aaPredicted RBP7.15□□□□□ -1.26
PTPN2-208ENST00000589216 H3BTX0 84 aa7.15□□□□□ -1.26
PTPN2-208ENST00000589216 SLC17A3O00476 420 aa7.15□□□□□ -1.26
PTPN2-208ENST00000589216 SSNA1O43805 119 aa7.15□□□□□ -1.26
PTPN2-208ENST00000589216 ZNF705DP0CH99 300 aaPredicted RBP7.15□□□□□ -1.26
PTPN2-208ENST00000589216 ZNF705BP0CI00 300 aaPredicted RBP7.15□□□□□ -1.26
PTPN2-208ENST00000589216 RBMY1A1P0DJD3 496 aaKnown RBP7.15□□□□□ -1.26
PTPN2-208ENST00000589216 RBMY1CP0DJD4 496 aa7.15□□□□□ -1.26
PTPN2-208ENST00000589216 NHLH2Q02577 135 aa7.15□□□□□ -1.26
PTPN2-208ENST00000589216 BAXQ07812 192 aa7.15□□□□□ -1.26
PTPN2-208ENST00000589216 FGL1Q08830 312 aa7.15□□□□□ -1.26
PTPN2-208ENST00000589216 OPCMLQ14982 345 aa7.15□□□□□ -1.26
PTPN2-208ENST00000589216 RBMY1FQ15415 496 aaKnown RBP7.15□□□□□ -1.26
PTPN2-208ENST00000589216 FOXI2Q6ZQN5 318 aa7.15□□□□□ -1.26
PTPN2-208ENST00000589216 STX12Q86Y82 276 aa7.15□□□□□ -1.26
PTPN2-208ENST00000589216 C16orf92Q96LL3 132 aa7.15□□□□□ -1.26
PTPN2-208ENST00000589216 NMES1Q9C002 83 aa7.15□□□□□ -1.26
PTPN2-208ENST00000589216 SLC35B3Q9H1N7 401 aa7.15□□□□□ -1.26
PTPN2-208ENST00000589216 ALG5Q9Y673 324 aa7.15□□□□□ -1.26
PTPN2-208ENST00000589216 DNAH1Q9P2D7 4330 aa7.15□□□□□ -1.27
PTPN2-208ENST00000589216 PLECQ15149 4684 aaKnown RBP7.15□□□□□ -1.27
PTPN2-208ENST00000589216 A0A087X0K7 114 aa7.14□□□□□ -1.27
PTPN2-208ENST00000589216 COX7A2P2O60397 106 aa7.14□□□□□ -1.27
PTPN2-208ENST00000589216 RPL7P18124 248 aaKnown RBP7.14□□□□□ -1.27
PTPN2-208ENST00000589216 ATF4P18848 351 aaPredicted RBP7.14□□□□□ -1.27
PTPN2-208ENST00000589216 FGF7P21781 194 aa7.14□□□□□ -1.27
PTPN2-208ENST00000589216 ID1P41134 155 aa7.14□□□□□ -1.27
PTPN2-208ENST00000589216 MEOX2P50222 304 aa7.14□□□□□ -1.27
PTPN2-208ENST00000589216 NANOS2P60321 138 aaKnown RBP7.14□□□□□ -1.27
PTPN2-208ENST00000589216 CLINT1Q14677 625 aa7.14□□□□□ -1.27
PTPN2-208ENST00000589216 GCSAMLQ5JQS6 135 aa7.14□□□□□ -1.27
PTPN2-208ENST00000589216 FAM78BQ5VT40 261 aa7.14□□□□□ -1.27
PTPN2-208ENST00000589216 AMTNQ6UX39 209 aa7.14□□□□□ -1.27
PTPN2-208ENST00000589216 LINC00305Q7Z4B0 112 aa7.14□□□□□ -1.27
PTPN2-208ENST00000589216 OR4B1Q8NGF8 309 aa7.14□□□□□ -1.27
PTPN2-208ENST00000589216 OR5C1Q8NGR4 320 aa7.14□□□□□ -1.27
PTPN2-208ENST00000589216 THAP6Q8TBB0 222 aa7.14□□□□□ -1.27
PTPN2-208ENST00000589216 PPP1R1CQ8WVI7 109 aa7.14□□□□□ -1.27
PTPN2-208ENST00000589216 GPR82Q96P67 336 aa7.14□□□□□ -1.27
PTPN2-208ENST00000589216 HYDINQ4G0P3 5121 aa7.13□□□□□ -1.27
PTPN2-208ENST00000589216 ELOA3CA0A087WX78 387 aaPredicted RBP7.13□□□□□ -1.27
PTPN2-208ENST00000589216 TRAV5A0A0B4J249 113 aa7.13□□□□□ -1.27
PTPN2-208ENST00000589216 A8MTW9 85 aa7.13□□□□□ -1.27
PTPN2-208ENST00000589216 E5RGE8 158 aa7.13□□□□□ -1.27
PTPN2-208ENST00000589216 PTTG1O95997 202 aa7.13□□□□□ -1.27
PTPN2-208ENST00000589216 CXCL3P19876 107 aa7.13□□□□□ -1.27
PTPN2-208ENST00000589216 S100A11P31949 105 aa7.13□□□□□ -1.27
PTPN2-208ENST00000589216 HBG1P69891 147 aa7.13□□□□□ -1.27
PTPN2-208ENST00000589216 HBG2P69892 147 aa7.13□□□□□ -1.27
PTPN2-208ENST00000589216 TMEM41BQ5BJD5 291 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms