RNA–Protein interactions for RNA: ENST00000588905.5

GCDH-208, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 5

Gene GCDH, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-208ENST00000588905 S100A7P31151 101 aa11.33□□□□□ -0.6
GCDH-208ENST00000588905 RAP2BP61225 183 aa11.33□□□□□ -0.6
GCDH-208ENST00000588905 SNRPD3P62318 126 aaKnown RBP11.33□□□□□ -0.6
GCDH-208ENST00000588905 HBG1P69891 147 aa11.33□□□□□ -0.6
GCDH-208ENST00000588905 HBG2P69892 147 aa11.33□□□□□ -0.6
GCDH-208ENST00000588905 ATP6V1FQ16864 119 aa11.33□□□□□ -0.6
GCDH-208ENST00000588905 ACTL10Q5JWF8 245 aa11.33□□□□□ -0.6
GCDH-208ENST00000588905 TRPT1Q86TN4 253 aaKnown RBP11.33□□□□□ -0.6
GCDH-208ENST00000588905 UHRF2Q96PU4 802 aa11.33□□□□□ -0.6
GCDH-208ENST00000588905 MPC2O95563 127 aa11.32□□□□□ -0.6
GCDH-208ENST00000588905 CXCL3P19876 107 aa11.32□□□□□ -0.6
GCDH-208ENST00000588905 GALR1P47211 349 aa11.32□□□□□ -0.6
GCDH-208ENST00000588905 CAMLGP49069 296 aa11.32□□□□□ -0.6
GCDH-208ENST00000588905 EWSR1Q01844 656 aaKnown RBP eCLIP11.32□□□□□ -0.6
GCDH-208ENST00000588905 RAB31Q13636 194 aa11.32□□□□□ -0.6
GCDH-208ENST00000588905 PXDC1Q5TGL8 231 aa11.32□□□□□ -0.6
GCDH-208ENST00000588905 SLC25A31Q9H0C2 315 aa11.32□□□□□ -0.6
GCDH-208ENST00000588905 GIG44P09565 113 aaPredicted RBP11.31□□□□□ -0.6
GCDH-208ENST00000588905 ID1P41134 155 aa11.31□□□□□ -0.6
GCDH-208ENST00000588905 PRR20EP86478 221 aa11.31□□□□□ -0.6
GCDH-208ENST00000588905 PRR20CP86479 221 aa11.31□□□□□ -0.6
GCDH-208ENST00000588905 PRR20DP86480 221 aa11.31□□□□□ -0.6
GCDH-208ENST00000588905 PRR20BP86481 221 aa11.31□□□□□ -0.6
GCDH-208ENST00000588905 PRR20AP86496 221 aa11.31□□□□□ -0.6
GCDH-208ENST00000588905 MORN3Q6PF18 240 aaPredicted RBP11.31□□□□□ -0.6
GCDH-208ENST00000588905 CHAC2Q8WUX2 184 aa11.31□□□□□ -0.6
GCDH-208ENST00000588905 TMEM37Q8WXS4 190 aa11.31□□□□□ -0.6
GCDH-208ENST00000588905 LINC00052Q96N35 136 aa11.31□□□□□ -0.6
GCDH-208ENST00000588905 GPR82Q96P67 336 aa11.31□□□□□ -0.6
GCDH-208ENST00000588905 RARRES2Q99969 163 aa11.31□□□□□ -0.6
GCDH-208ENST00000588905 ARV1Q9H2C2 271 aa11.31□□□□□ -0.6
GCDH-208ENST00000588905 UBE2L5PA0A1B0GUS4 154 aa11.3□□□□□ -0.6
GCDH-208ENST00000588905 SPP1P10451 314 aa11.3□□□□□ -0.6
GCDH-208ENST00000588905 ATF4P18848 351 aaPredicted RBP11.3□□□□□ -0.6
GCDH-208ENST00000588905 PSMB3P49720 205 aa11.3□□□□□ -0.6
GCDH-208ENST00000588905 DEFB1P60022 68 aa11.3□□□□□ -0.6
GCDH-208ENST00000588905 FCN2Q15485 313 aa11.3□□□□□ -0.6
GCDH-208ENST00000588905 TMEM41BQ5BJD5 291 aa11.3□□□□□ -0.6
GCDH-208ENST00000588905 MIC13Q5XKP0 118 aa11.3□□□□□ -0.6
GCDH-208ENST00000588905 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.3□□□□□ -0.6
GCDH-208ENST00000588905 OR5C1Q8NGR4 320 aa11.3□□□□□ -0.6
GCDH-208ENST00000588905 OR11H2Q8NH07 326 aa11.3□□□□□ -0.6
GCDH-208ENST00000588905 AGRNO00468 2067 aa11.3□□□□□ -0.6
GCDH-208ENST00000588905 H3BMM0 161 aa11.29□□□□□ -0.6
GCDH-208ENST00000588905 ISLRO14498 428 aa11.29□□□□□ -0.6
GCDH-208ENST00000588905 RPL29P47914 159 aaKnown RBP11.29□□□□□ -0.6
GCDH-208ENST00000588905 MEOX2P50222 304 aa11.29□□□□□ -0.6
GCDH-208ENST00000588905 BAXQ07812 192 aa11.29□□□□□ -0.6
GCDH-208ENST00000588905 LINC00305Q7Z4B0 112 aa11.29□□□□□ -0.6
GCDH-208ENST00000588905 S100A7AQ86SG5 101 aa11.29□□□□□ -0.6
GCDH-208ENST00000588905 OR11H7Q8NGC8 314 aa11.29□□□□□ -0.6
GCDH-208ENST00000588905 C16orf92Q96LL3 132 aa11.29□□□□□ -0.6
GCDH-208ENST00000588905 C20orf173Q96LM9 149 aa11.29□□□□□ -0.6
GCDH-208ENST00000588905 MED28Q9H204 178 aa11.29□□□□□ -0.6
GCDH-208ENST00000588905 DNAJC4Q9NNZ3 241 aa11.29□□□□□ -0.6
GCDH-208ENST00000588905 ELOA3CA0A087WX78 387 aaPredicted RBP11.28□□□□□ -0.6
GCDH-208ENST00000588905 MRPS12O15235 138 aaKnown RBP11.28□□□□□ -0.6
GCDH-208ENST00000588905 COX7A2P2O60397 106 aa11.28□□□□□ -0.6
GCDH-208ENST00000588905 RPL7P18124 248 aaKnown RBP11.28□□□□□ -0.6
GCDH-208ENST00000588905 FGF7P21781 194 aa11.28□□□□□ -0.6
GCDH-208ENST00000588905 CLINT1Q14677 625 aa11.28□□□□□ -0.6
GCDH-208ENST00000588905 OPCMLQ14982 345 aa11.28□□□□□ -0.6
GCDH-208ENST00000588905 PLECQ15149 4684 aaKnown RBP11.28□□□□□ -0.6
GCDH-208ENST00000588905 RGS21Q2M5E4 152 aa11.28□□□□□ -0.6
GCDH-208ENST00000588905 GDF5OSQ5U4N7 250 aa11.28□□□□□ -0.6
GCDH-208ENST00000588905 SAMD13Q5VXD3 122 aa11.28□□□□□ -0.6
GCDH-208ENST00000588905 MORN5Q5VZ52 161 aa11.28□□□□□ -0.6
GCDH-208ENST00000588905 Q6ZRG5 221 aa11.28□□□□□ -0.6
GCDH-208ENST00000588905 THAP6Q8TBB0 222 aa11.28□□□□□ -0.6
GCDH-208ENST00000588905 SLC39A9Q9NUM3 307 aa11.28□□□□□ -0.6
GCDH-208ENST00000588905 TRAV8-2A0A0B4J237 113 aa11.27□□□□□ -0.61
GCDH-208ENST00000588905 MPDU1O75352 247 aa11.27□□□□□ -0.61
GCDH-208ENST00000588905 PET100P0DJ07 73 aa11.27□□□□□ -0.61
GCDH-208ENST00000588905 HLA-DRB4P13762 266 aa11.27□□□□□ -0.61
GCDH-208ENST00000588905 C4BPBP20851 252 aa11.27□□□□□ -0.61
GCDH-208ENST00000588905 OXA1LQ15070 435 aa11.27□□□□□ -0.61
GCDH-208ENST00000588905 C10orf113Q5VZT2 155 aa11.27□□□□□ -0.61
GCDH-208ENST00000588905 IGFL4Q6B9Z1 124 aa11.27□□□□□ -0.61
GCDH-208ENST00000588905 SAV1Q9H4B6 383 aaPredicted RBP11.27□□□□□ -0.61
GCDH-208ENST00000588905 MBD2Q9UBB5 411 aa11.27□□□□□ -0.61
GCDH-208ENST00000588905 HLA-DRB4X5D2U9 266 aa11.27□□□□□ -0.61
GCDH-208ENST00000588905 CXorf65A6NEN9 183 aa11.26□□□□□ -0.61
GCDH-208ENST00000588905 RPL12P30050 165 aaKnown RBP11.26□□□□□ -0.61
GCDH-208ENST00000588905 B2MP61769 119 aa11.26□□□□□ -0.61
GCDH-208ENST00000588905 NUTF2P61970 127 aaKnown RBP11.26□□□□□ -0.61
GCDH-208ENST00000588905 FGL1Q08830 312 aa11.26□□□□□ -0.61
GCDH-208ENST00000588905 FOXI2Q6ZQN5 318 aa11.26□□□□□ -0.61
GCDH-208ENST00000588905 NPCDR1Q9BY65 106 aa11.26□□□□□ -0.61
GCDH-208ENST00000588905 C11orf68Q9H3H3 251 aaKnown RBP11.26□□□□□ -0.61
GCDH-208ENST00000588905 RNF24Q9Y225 148 aa11.26□□□□□ -0.61
GCDH-208ENST00000588905 HSPB11Q9Y547 144 aa11.26□□□□□ -0.61
GCDH-208ENST00000588905 PXMP4Q9Y6I8 212 aa11.26□□□□□ -0.61
GCDH-208ENST00000588905 A0A087X0K7 114 aa11.25□□□□□ -0.61
GCDH-208ENST00000588905 TRAV5A0A0B4J249 113 aa11.25□□□□□ -0.61
GCDH-208ENST00000588905 F6UB75 175 aa11.25□□□□□ -0.61
GCDH-208ENST00000588905 PMS2P11Q13670 270 aa11.25□□□□□ -0.61
GCDH-208ENST00000588905 CSNK1G2-AS1Q8NCQ2 148 aa11.25□□□□□ -0.61
GCDH-208ENST00000588905 OR1L4Q8NGR5 311 aa11.25□□□□□ -0.61
GCDH-208ENST00000588905 WDR61Q9GZS3 305 aaKnown RBP11.25□□□□□ -0.61
GCDH-208ENST00000588905 ALMS1Q8TCU4 4167 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms