RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 LRTM2Q8N967 370 aa12.87□□□□□ -0.35
CCDC43-204ENST00000588687 OR1B1Q8NGR6 318 aa12.87□□□□□ -0.35
CCDC43-204ENST00000588687 DIRAS2Q96HU8 199 aa12.87□□□□□ -0.35
CCDC43-204ENST00000588687 SCGB3A2Q96PL1 93 aa12.87□□□□□ -0.35
CCDC43-204ENST00000588687 SOSTQ9BQB4 213 aa12.87□□□□□ -0.35
CCDC43-204ENST00000588687 ATG101Q9BSB4 218 aa12.87□□□□□ -0.35
CCDC43-204ENST00000588687 RABL2AQ9UBK7 228 aaPredicted RBP12.87□□□□□ -0.35
CCDC43-204ENST00000588687 RABL2BQ9UNT1 228 aa12.87□□□□□ -0.35
CCDC43-204ENST00000588687 LINC00588Q9Y4M8 146 aa12.87□□□□□ -0.35
CCDC43-204ENST00000588687 H3BRN7 92 aa12.86□□□□□ -0.35
CCDC43-204ENST00000588687 DUSP14O95147 198 aaKnown RBP12.86□□□□□ -0.35
CCDC43-204ENST00000588687 DEFB130BP0DP73 79 aa12.86□□□□□ -0.35
CCDC43-204ENST00000588687 DEFB130AP0DP74 79 aa12.86□□□□□ -0.35
CCDC43-204ENST00000588687 SLC25A6P12236 298 aa12.86□□□□□ -0.35
CCDC43-204ENST00000588687 ANXA3P12429 323 aa12.86□□□□□ -0.35
CCDC43-204ENST00000588687 FCN2Q15485 313 aa12.86□□□□□ -0.35
CCDC43-204ENST00000588687 DYNC2LI1Q8TCX1 351 aa12.86□□□□□ -0.35
CCDC43-204ENST00000588687 GPR82Q96P67 336 aa12.86□□□□□ -0.35
CCDC43-204ENST00000588687 KRTAP1-5Q9BYS1 174 aa12.86□□□□□ -0.35
CCDC43-204ENST00000588687 MCUBQ9NWR8 336 aa12.86□□□□□ -0.35
CCDC43-204ENST00000588687 CCDC59Q9P031 241 aaKnown RBP12.86□□□□□ -0.35
CCDC43-204ENST00000588687 FAT1Q14517 4588 aa12.85□□□□□ -0.35
CCDC43-204ENST00000588687 TRAV12-2A0A075B6T6 113 aa12.85□□□□□ -0.35
CCDC43-204ENST00000588687 BOLA2-SMG1P6H3BVE0 249 aa12.85□□□□□ -0.35
CCDC43-204ENST00000588687 RNF141Q8WVD5 230 aa12.85□□□□□ -0.35
CCDC43-204ENST00000588687 SLC25A39Q9BZJ4 359 aaPredicted RBP12.85□□□□□ -0.35
CCDC43-204ENST00000588687 F5H768 121 aa12.84□□□□□ -0.35
CCDC43-204ENST00000588687 ORM2P19652 201 aa12.84□□□□□ -0.35
CCDC43-204ENST00000588687 B2MP61769 119 aa12.84□□□□□ -0.35
CCDC43-204ENST00000588687 ACOT7LQ6ZUV0 252 aa12.84□□□□□ -0.35
CCDC43-204ENST00000588687 GPR141Q7Z602 305 aa12.84□□□□□ -0.35
CCDC43-204ENST00000588687 BPIFCQ8NFQ6 507 aa12.84□□□□□ -0.35
CCDC43-204ENST00000588687 TRIM63Q969Q1 353 aa12.84□□□□□ -0.35
CCDC43-204ENST00000588687 NUDT3O95989 172 aa12.83□□□□□ -0.36
CCDC43-204ENST00000588687 ATP5G1P05496 136 aa12.83□□□□□ -0.36
CCDC43-204ENST00000588687 ATP5G3P48201 142 aa12.83□□□□□ -0.36
CCDC43-204ENST00000588687 TMEM128Q5BJH2 165 aa12.83□□□□□ -0.36
CCDC43-204ENST00000588687 Q8N1X5 172 aa12.83□□□□□ -0.36
CCDC43-204ENST00000588687 SHANK2-AS3Q9BTD1 123 aa12.83□□□□□ -0.36
CCDC43-204ENST00000588687 TMEM147Q9BVK8 224 aa12.83□□□□□ -0.36
CCDC43-204ENST00000588687 PAIP2BQ9ULR5 123 aaKnown RBP12.83□□□□□ -0.36
CCDC43-204ENST00000588687 CBY3A6NI87 242 aa12.82□□□□□ -0.36
CCDC43-204ENST00000588687 SYNGR2O43760 224 aa12.82□□□□□ -0.36
CCDC43-204ENST00000588687 CXCL3P19876 107 aa12.82□□□□□ -0.36
CCDC43-204ENST00000588687 TMED4Q7Z7H5 227 aa12.82□□□□□ -0.36
CCDC43-204ENST00000588687 ZNF738Q8NE65 137 aa12.82□□□□□ -0.36
CCDC43-204ENST00000588687 RNASE8Q8TDE3 154 aaKnown RBP12.82□□□□□ -0.36
CCDC43-204ENST00000588687 CIB3Q96Q77 187 aaPredicted RBP12.82□□□□□ -0.36
CCDC43-204ENST00000588687 SLIRPQ9GZT3 109 aaKnown RBP12.82□□□□□ -0.36
CCDC43-204ENST00000588687 RSL24D1Q9UHA3 163 aaKnown RBP12.82□□□□□ -0.36
CCDC43-204ENST00000588687 A0A087X0K7 114 aa12.81□□□□□ -0.36
CCDC43-204ENST00000588687 PIGBOS1A0A0B4J2F0 54 aa12.81□□□□□ -0.36
CCDC43-204ENST00000588687 H3BP45 60 aa12.81□□□□□ -0.36
CCDC43-204ENST00000588687 MED6O75586 246 aa12.81□□□□□ -0.36
CCDC43-204ENST00000588687 TAS2R60P59551 318 aa12.81□□□□□ -0.36
CCDC43-204ENST00000588687 TMEM256Q8N2U0 113 aa12.81□□□□□ -0.36
CCDC43-204ENST00000588687 OR8A1Q8NGG7 326 aa12.81□□□□□ -0.36
CCDC43-204ENST00000588687 WRBO00258 174 aa12.8□□□□□ -0.36
CCDC43-204ENST00000588687 MRPS12O15235 138 aaKnown RBP12.8□□□□□ -0.36
CCDC43-204ENST00000588687 CCL18P55774 89 aa12.8□□□□□ -0.36
CCDC43-204ENST00000588687 PLP1P60201 277 aa12.8□□□□□ -0.36
CCDC43-204ENST00000588687 HIST1H1AQ02539 215 aaPredicted RBP12.8□□□□□ -0.36
CCDC43-204ENST00000588687 AKR1C1Q04828 323 aa12.8□□□□□ -0.36
CCDC43-204ENST00000588687 SSX7Q7RTT5 188 aa12.8□□□□□ -0.36
CCDC43-204ENST00000588687 TMEM144Q7Z5S9 345 aa12.8□□□□□ -0.36
CCDC43-204ENST00000588687 LINC00612Q8N6U2 182 aa12.8□□□□□ -0.36
CCDC43-204ENST00000588687 C16orf74Q96GX8 76 aa12.8□□□□□ -0.36
CCDC43-204ENST00000588687 MRPS26Q9BYN8 205 aaKnown RBP12.8□□□□□ -0.36
CCDC43-204ENST00000588687 PMS2P5A8MQ11 134 aa12.79□□□□□ -0.36
CCDC43-204ENST00000588687 PRB4P10163 310 aaPredicted RBP12.79□□□□□ -0.36
CCDC43-204ENST00000588687 RPL7P18124 248 aaKnown RBP12.79□□□□□ -0.36
CCDC43-204ENST00000588687 VAMP1P23763 118 aa12.79□□□□□ -0.36
CCDC43-204ENST00000588687 TNFSF8P32971 234 aa12.79□□□□□ -0.36
CCDC43-204ENST00000588687 FGL1Q08830 312 aa12.79□□□□□ -0.36
CCDC43-204ENST00000588687 PPP1R1AQ13522 171 aa12.79□□□□□ -0.36
CCDC43-204ENST00000588687 SPANXN5Q5MJ07 72 aa12.79□□□□□ -0.36
CCDC43-204ENST00000588687 CYP2G1PQ6ZSU1 146 aa12.79□□□□□ -0.36
CCDC43-204ENST00000588687 UHRF2Q96PU4 802 aa12.79□□□□□ -0.36
CCDC43-204ENST00000588687 SFT2D2O95562 160 aa12.78□□□□□ -0.36
CCDC43-204ENST00000588687 KRTAP10-2P60368 255 aa12.78□□□□□ -0.36
CCDC43-204ENST00000588687 RPP30P78346 268 aaKnown RBP12.78□□□□□ -0.36
CCDC43-204ENST00000588687 SPATA12Q7Z6I5 190 aa12.78□□□□□ -0.36
CCDC43-204ENST00000588687 RAB2BQ8WUD1 216 aa12.78□□□□□ -0.36
CCDC43-204ENST00000588687 TMEM263Q8WUH6 116 aaKnown RBP12.78□□□□□ -0.36
CCDC43-204ENST00000588687 LINC01587Q99440 93 aa12.78□□□□□ -0.36
CCDC43-204ENST00000588687 HIGD1AQ9Y241 93 aa12.78□□□□□ -0.36
CCDC43-204ENST00000588687 TIMM8BQ9Y5J9 83 aaPredicted RBP12.78□□□□□ -0.36
CCDC43-204ENST00000588687 LINC00869P0C866 280 aa12.77□□□□□ -0.37
CCDC43-204ENST00000588687 KIR3DS1Q14943 382 aa12.77□□□□□ -0.37
CCDC43-204ENST00000588687 PSG3Q16557 428 aa12.77□□□□□ -0.37
CCDC43-204ENST00000588687 Q9H3A6 140 aa12.77□□□□□ -0.37
CCDC43-204ENST00000588687 MYCBP2O75592 4640 aa12.76□□□□□ -0.37
CCDC43-204ENST00000588687 FABP12A6NFH5 140 aa12.76□□□□□ -0.37
CCDC43-204ENST00000588687 S100A7P31151 101 aa12.76□□□□□ -0.37
CCDC43-204ENST00000588687 PATE2Q6UY27 113 aa12.76□□□□□ -0.37
CCDC43-204ENST00000588687 ZNF493Q6ZR52 646 aa12.76□□□□□ -0.37
CCDC43-204ENST00000588687 BCL7BQ9BQE9 202 aa12.76□□□□□ -0.37
CCDC43-204ENST00000588687 UPK3BQ9BT76 320 aa12.76□□□□□ -0.37
CCDC43-204ENST00000588687 Q9H8V8 135 aa12.76□□□□□ -0.37
CCDC43-204ENST00000588687 NOP10Q9NPE3 64 aaKnown RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms