RNA–Protein interactions for RNA: ENST00000588323.1

VPS4B-203, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 3

Gene VPS4B, Length 463 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-203ENST00000588323 PABPC1L2AQ5JQF8 200 aa1.84□□□□□ -2.11
VPS4B-203ENST00000588323 ZNF678Q5SXM1 525 aa1.84□□□□□ -2.11
VPS4B-203ENST00000588323 C6orf52Q5T4I8 152 aa1.84□□□□□ -2.11
VPS4B-203ENST00000588323 GOLT1AQ6ZVE7 132 aa1.84□□□□□ -2.11
VPS4B-203ENST00000588323 OOSP2Q86WS3 158 aa1.84□□□□□ -2.11
VPS4B-203ENST00000588323 SNX29P2Q8IUI4 249 aa1.84□□□□□ -2.11
VPS4B-203ENST00000588323 C20orf196Q8IYI0 205 aa1.84□□□□□ -2.11
VPS4B-203ENST00000588323 TMEM86AQ8N2M4 240 aa1.84□□□□□ -2.11
VPS4B-203ENST00000588323 OR10D3Q8NH80 312 aa1.84□□□□□ -2.11
VPS4B-203ENST00000588323 ZNRF2Q8NHG8 242 aa1.84□□□□□ -2.11
VPS4B-203ENST00000588323 SLC7A6Q92536 515 aa1.84□□□□□ -2.11
VPS4B-203ENST00000588323 MALSU1Q96EH3 234 aa1.84□□□□□ -2.11
VPS4B-203ENST00000588323 OR52B2Q96RD2 323 aa1.84□□□□□ -2.11
VPS4B-203ENST00000588323 PSMG3Q9BT73 122 aaPredicted RBP1.84□□□□□ -2.11
VPS4B-203ENST00000588323 DOHHQ9BU89 302 aa1.84□□□□□ -2.11
VPS4B-203ENST00000588323 LINC00470Q9BZP3 86 aa1.84□□□□□ -2.11
VPS4B-203ENST00000588323 OR2J1Q9GZK6 312 aa1.84□□□□□ -2.11
VPS4B-203ENST00000588323 RNASE7Q9H1E1 156 aaKnown RBP1.84□□□□□ -2.11
VPS4B-203ENST00000588323 OR51I2Q9H344 312 aa1.84□□□□□ -2.11
VPS4B-203ENST00000588323 CST9LQ9H4G1 147 aa1.84□□□□□ -2.11
VPS4B-203ENST00000588323 POPDC3Q9HBV1 291 aa1.84□□□□□ -2.11
VPS4B-203ENST00000588323 MRPL16Q9NX20 251 aaKnown RBP1.84□□□□□ -2.11
VPS4B-203ENST00000588323 FBXL12Q9NXK8 326 aa1.84□□□□□ -2.11
VPS4B-203ENST00000588323 IDI2-AS1Q9NZ38 188 aa1.84□□□□□ -2.11
VPS4B-203ENST00000588323 PRNDQ9UKY0 176 aa1.84□□□□□ -2.11
VPS4B-203ENST00000588323 SNX12Q9UMY4 172 aa1.84□□□□□ -2.11
VPS4B-203ENST00000588323 LAMTOR2Q9Y2Q5 125 aa1.84□□□□□ -2.11
VPS4B-203ENST00000588323 CARHSP1Q9Y2V2 147 aaKnown RBP1.84□□□□□ -2.11
VPS4B-203ENST00000588323 RFNGQ9Y644 331 aa1.84□□□□□ -2.11
VPS4B-203ENST00000588323 DCHS2Q6V1P9 2916 aa1.84□□□□□ -2.11
VPS4B-203ENST00000588323 DIDO1Q9BTC0 2240 aaKnown RBP1.83□□□□□ -2.12
VPS4B-203ENST00000588323 ZFC3H1O60293 1989 aaKnown RBP1.83□□□□□ -2.12
VPS4B-203ENST00000588323 MXRA5Q9NR99 2828 aa1.83□□□□□ -2.12
VPS4B-203ENST00000588323 IGHV1-45A0A0A0MS14 117 aa1.83□□□□□ -2.12
VPS4B-203ENST00000588323 TEX50A0A1B0GTY4 177 aa1.83□□□□□ -2.12
VPS4B-203ENST00000588323 RIIAD1A6NNX1 92 aa1.83□□□□□ -2.12
VPS4B-203ENST00000588323 BBIP1A8MTZ0 92 aa1.83□□□□□ -2.12
VPS4B-203ENST00000588323 BTNL10A8MVZ5 291 aa1.83□□□□□ -2.12
VPS4B-203ENST00000588323 H3BQF6 201 aa1.83□□□□□ -2.12
VPS4B-203ENST00000588323 ISLRO14498 428 aa1.83□□□□□ -2.12
VPS4B-203ENST00000588323 STK16O75716 305 aa1.83□□□□□ -2.12
VPS4B-203ENST00000588323 TTRP02766 147 aa1.83□□□□□ -2.12
VPS4B-203ENST00000588323 CRYGDP07320 174 aa1.83□□□□□ -2.12
VPS4B-203ENST00000588323 AKAIN1P0CW23 69 aa1.83□□□□□ -2.12
VPS4B-203ENST00000588323 CXCL8P10145 99 aa1.83□□□□□ -2.12
VPS4B-203ENST00000588323 CTSEP14091 401 aa1.83□□□□□ -2.12
VPS4B-203ENST00000588323 MUC1P15941 1255 aaPredicted RBP1.83□□□□□ -2.12
VPS4B-203ENST00000588323 HIST1H1BP16401 226 aaKnown RBP1.83□□□□□ -2.12
VPS4B-203ENST00000588323 ORM2P19652 201 aa1.83□□□□□ -2.12
VPS4B-203ENST00000588323 CXCL2P19875 107 aa1.83□□□□□ -2.12
VPS4B-203ENST00000588323 EVI2AP22794 236 aa1.83□□□□□ -2.12
VPS4B-203ENST00000588323 CNTFRP26992 372 aa1.83□□□□□ -2.12
VPS4B-203ENST00000588323 GUCA1AP43080 201 aaPredicted RBP1.83□□□□□ -2.12
VPS4B-203ENST00000588323 S100A10P60903 97 aa1.83□□□□□ -2.12
VPS4B-203ENST00000588323 DAD1P61803 113 aa1.83□□□□□ -2.12
VPS4B-203ENST00000588323 HBA1P69905 142 aa1.83□□□□□ -2.12
VPS4B-203ENST00000588323 IHHQ14623 411 aa1.83□□□□□ -2.12
VPS4B-203ENST00000588323 CST6Q15828 149 aa1.83□□□□□ -2.12
VPS4B-203ENST00000588323 MRPL2Q5T653 305 aaKnown RBP1.83□□□□□ -2.12
VPS4B-203ENST00000588323 FAM104BQ5XKR9 115 aa1.83□□□□□ -2.12
VPS4B-203ENST00000588323 SFXN4Q6P4A7 337 aa1.83□□□□□ -2.12
VPS4B-203ENST00000588323 PRSS54Q6PEW0 395 aa1.83□□□□□ -2.12
VPS4B-203ENST00000588323 WDR59Q6PJI9 974 aa1.83□□□□□ -2.12
VPS4B-203ENST00000588323 TCF23Q7RTU1 214 aa1.83□□□□□ -2.12
VPS4B-203ENST00000588323 UMODL1-AS1Q8N2C9 162 aa1.83□□□□□ -2.12
VPS4B-203ENST00000588323 OSR2Q8N2R0 312 aa1.83□□□□□ -2.12
VPS4B-203ENST00000588323 ANKRD29Q8N6D5 301 aa1.83□□□□□ -2.12
VPS4B-203ENST00000588323 KRTCAP2Q8N6L1 136 aa1.83□□□□□ -2.12
VPS4B-203ENST00000588323 SLC35G3Q8N808 338 aa1.83□□□□□ -2.12
VPS4B-203ENST00000588323 TMEM229BQ8NBD8 167 aa1.83□□□□□ -2.12
VPS4B-203ENST00000588323 OR52L1Q8NGH7 329 aa1.83□□□□□ -2.12
VPS4B-203ENST00000588323 OR5A2Q8NGI9 324 aa1.83□□□□□ -2.12
VPS4B-203ENST00000588323 OR13C8Q8NGS7 320 aa1.83□□□□□ -2.12
VPS4B-203ENST00000588323 GPR119Q8TDV5 335 aa1.83□□□□□ -2.12
VPS4B-203ENST00000588323 ITLN2Q8WWU7 325 aaPredicted RBP1.83□□□□□ -2.12
VPS4B-203ENST00000588323 LINC00477Q96M19 166 aa1.83□□□□□ -2.12
VPS4B-203ENST00000588323 ZNF471Q9BX82 626 aaPredicted RBP1.83□□□□□ -2.12
VPS4B-203ENST00000588323 NKX6-2Q9C056 277 aaPredicted RBP1.83□□□□□ -2.12
VPS4B-203ENST00000588323 SH3BGRL3Q9H299 93 aa1.83□□□□□ -2.12
VPS4B-203ENST00000588323 METTL1Q9UBP6 276 aaKnown RBP1.83□□□□□ -2.12
VPS4B-203ENST00000588323 LAMTOR3Q9UHA4 124 aa1.83□□□□□ -2.12
VPS4B-203ENST00000588323 NAT8BQ9UHF3 227 aa1.83□□□□□ -2.12
VPS4B-203ENST00000588323 ERG28Q9UKR5 140 aa1.83□□□□□ -2.12
VPS4B-203ENST00000588323 TNFSF18Q9UNG2 199 aa1.83□□□□□ -2.12
VPS4B-203ENST00000588323 COL27A1Q8IZC6 1860 aaPredicted RBP1.83□□□□□ -2.12
VPS4B-203ENST00000588323 MAP1AP78559 2803 aaPredicted RBP1.83□□□□□ -2.12
VPS4B-203ENST00000588323 IGKV2-28A0A075B6P5 120 aa1.82□□□□□ -2.12
VPS4B-203ENST00000588323 TRAV36DV7A0A075B6V5 113 aa1.82□□□□□ -2.12
VPS4B-203ENST00000588323 TRAV30A0A087WSZ9 112 aa1.82□□□□□ -2.12
VPS4B-203ENST00000588323 SPTY2D1-AS1A0A0U1RR47 76 aa1.82□□□□□ -2.12
VPS4B-203ENST00000588323 hADV38S2A0JD32 116 aa1.82□□□□□ -2.12
VPS4B-203ENST00000588323 C5orf49A4QMS7 147 aa1.82□□□□□ -2.12
VPS4B-203ENST00000588323 IZUMO1RA6ND01 250 aa1.82□□□□□ -2.12
VPS4B-203ENST00000588323 ZNF850A8MQ14 1090 aa1.82□□□□□ -2.12
VPS4B-203ENST00000588323 A8MWP6 167 aa1.82□□□□□ -2.12
VPS4B-203ENST00000588323 C9JAW5 83 aa1.82□□□□□ -2.12
VPS4B-203ENST00000588323 NRASP01111 189 aa1.82□□□□□ -2.12
VPS4B-203ENST00000588323 HRASP01112 189 aa1.82□□□□□ -2.12
VPS4B-203ENST00000588323 KRASP01116 189 aa1.82□□□□□ -2.12
VPS4B-203ENST00000588323 IFNA7P01567 189 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms