RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 SLC45A2Q9UMX9 530 aa8.24□□□□□ -1.09
BRCA1-225ENST00000586385 ANKRD20A5PA0PJZ0 165 aa8.23□□□□□ -1.09
BRCA1-225ENST00000586385 BOLA2-SMG1P6H3BVE0 249 aa8.23□□□□□ -1.09
BRCA1-225ENST00000586385 DUSP14O95147 198 aaKnown RBP8.23□□□□□ -1.09
BRCA1-225ENST00000586385 FABP1P07148 127 aa8.23□□□□□ -1.09
BRCA1-225ENST00000586385 SMIM18P0DKX4 95 aa8.23□□□□□ -1.09
BRCA1-225ENST00000586385 MRPS10P82664 201 aaKnown RBP8.23□□□□□ -1.09
BRCA1-225ENST00000586385 GPR141Q7Z602 305 aa8.23□□□□□ -1.09
BRCA1-225ENST00000586385 CLVS1Q8IUQ0 354 aaPredicted RBP8.23□□□□□ -1.09
BRCA1-225ENST00000586385 OR4D5Q8NGN0 318 aa8.23□□□□□ -1.09
BRCA1-225ENST00000586385 OR1S1Q8NH92 325 aa8.23□□□□□ -1.09
BRCA1-225ENST00000586385 UHRF2Q96PU4 802 aa8.23□□□□□ -1.09
BRCA1-225ENST00000586385 PRRT1Q99946 306 aa8.23□□□□□ -1.09
BRCA1-225ENST00000586385 KCNIP3Q9Y2W7 256 aa8.23□□□□□ -1.09
BRCA1-225ENST00000586385 H3BRN7 92 aa8.22□□□□□ -1.09
BRCA1-225ENST00000586385 CTDSPLO15194 276 aa8.22□□□□□ -1.09
BRCA1-225ENST00000586385 AKR1C4P17516 323 aa8.22□□□□□ -1.09
BRCA1-225ENST00000586385 ORM2P19652 201 aa8.22□□□□□ -1.09
BRCA1-225ENST00000586385 B2MP61769 119 aa8.22□□□□□ -1.09
BRCA1-225ENST00000586385 KIR3DS1Q14943 382 aa8.22□□□□□ -1.09
BRCA1-225ENST00000586385 LINC00612Q8N6U2 182 aa8.22□□□□□ -1.09
BRCA1-225ENST00000586385 OR1B1Q8NGR6 318 aa8.22□□□□□ -1.09
BRCA1-225ENST00000586385 RNASE8Q8TDE3 154 aaKnown RBP8.22□□□□□ -1.09
BRCA1-225ENST00000586385 Q9H3A6 140 aa8.22□□□□□ -1.09
BRCA1-225ENST00000586385 CFDP00746 253 aaPredicted RBP8.21□□□□□ -1.1
BRCA1-225ENST00000586385 CXCL3P19876 107 aa8.21□□□□□ -1.1
BRCA1-225ENST00000586385 BTF3P20290 206 aaKnown RBP8.21□□□□□ -1.1
BRCA1-225ENST00000586385 HOXA5P20719 270 aa8.21□□□□□ -1.1
BRCA1-225ENST00000586385 TAS2R60P59551 318 aa8.21□□□□□ -1.1
BRCA1-225ENST00000586385 SPCS2Q15005 226 aa8.21□□□□□ -1.1
BRCA1-225ENST00000586385 ESRGQ1W209 222 aa8.21□□□□□ -1.1
BRCA1-225ENST00000586385 GGNBP1Q5YKI7 109 aa8.21□□□□□ -1.1
BRCA1-225ENST00000586385 Q6ZRN7 208 aaPredicted RBP8.21□□□□□ -1.1
BRCA1-225ENST00000586385 ZNF738Q8NE65 137 aa8.21□□□□□ -1.1
BRCA1-225ENST00000586385 OR8A1Q8NGG7 326 aa8.21□□□□□ -1.1
BRCA1-225ENST00000586385 LINC01587Q99440 93 aa8.21□□□□□ -1.1
BRCA1-225ENST00000586385 NOP10Q9NPE3 64 aaKnown RBP8.21□□□□□ -1.1
BRCA1-225ENST00000586385 FAT1Q14517 4588 aa8.2□□□□□ -1.1
BRCA1-225ENST00000586385 TRAV26-1A0A087WT03 109 aa8.2□□□□□ -1.1
BRCA1-225ENST00000586385 RGS5O15539 181 aa8.2□□□□□ -1.1
BRCA1-225ENST00000586385 FUSP35637 526 aaKnown RBP eCLIP8.2□□□□□ -1.1
BRCA1-225ENST00000586385 RAB11AP62491 216 aa8.2□□□□□ -1.1
BRCA1-225ENST00000586385 HIST1H1AQ02539 215 aaPredicted RBP8.2□□□□□ -1.1
BRCA1-225ENST00000586385 FGL1Q08830 312 aa8.2□□□□□ -1.1
BRCA1-225ENST00000586385 CLINT1Q14677 625 aa8.2□□□□□ -1.1
BRCA1-225ENST00000586385 RXFP4Q8TDU9 374 aa8.2□□□□□ -1.1
BRCA1-225ENST00000586385 GPR82Q96P67 336 aa8.2□□□□□ -1.1
BRCA1-225ENST00000586385 UPK3BQ9BT76 320 aa8.2□□□□□ -1.1
BRCA1-225ENST00000586385 SHANK2-AS3Q9BTD1 123 aa8.2□□□□□ -1.1
BRCA1-225ENST00000586385 PAIP2BQ9ULR5 123 aaKnown RBP8.2□□□□□ -1.1
BRCA1-225ENST00000586385 TIMM8BQ9Y5J9 83 aaPredicted RBP8.2□□□□□ -1.1
BRCA1-225ENST00000586385 ZNF701M0R085 212 aaPredicted RBP8.19□□□□□ -1.1
BRCA1-225ENST00000586385 MRPS12O15235 138 aaKnown RBP8.19□□□□□ -1.1
BRCA1-225ENST00000586385 HTN1P15515 57 aa8.19□□□□□ -1.1
BRCA1-225ENST00000586385 XGP55808 180 aa8.19□□□□□ -1.1
BRCA1-225ENST00000586385 SRPXP78539 464 aa8.19□□□□□ -1.1
BRCA1-225ENST00000586385 DLK1P80370 383 aa8.19□□□□□ -1.1
BRCA1-225ENST00000586385 ACOT7LQ6ZUV0 252 aa8.19□□□□□ -1.1
BRCA1-225ENST00000586385 TMEM256Q8N2U0 113 aa8.19□□□□□ -1.1
BRCA1-225ENST00000586385 BPIFCQ8NFQ6 507 aa8.19□□□□□ -1.1
BRCA1-225ENST00000586385 ZNF503Q96F45 646 aa8.19□□□□□ -1.1
BRCA1-225ENST00000586385 C16orf74Q96GX8 76 aa8.19□□□□□ -1.1
BRCA1-225ENST00000586385 SOSTQ9BQB4 213 aa8.19□□□□□ -1.1
BRCA1-225ENST00000586385 TMEM147Q9BVK8 224 aa8.19□□□□□ -1.1
BRCA1-225ENST00000586385 PARD6GQ9BYG4 376 aaPredicted RBP8.19□□□□□ -1.1
BRCA1-225ENST00000586385 ZNF586Q9NXT0 402 aa8.19□□□□□ -1.1
BRCA1-225ENST00000586385 SCP2D1Q9UJQ7 156 aa8.19□□□□□ -1.1
BRCA1-225ENST00000586385 DMBT1Q9UGM3 2413 aaPredicted RBP8.19□□□□□ -1.1
BRCA1-225ENST00000586385 A0A087X0K7 114 aa8.18□□□□□ -1.1
BRCA1-225ENST00000586385 A0A0J9YY99 117 aa8.18□□□□□ -1.1
BRCA1-225ENST00000586385 DUXBA0A1W2PPF3 345 aa8.18□□□□□ -1.1
BRCA1-225ENST00000586385 H3BP45 60 aa8.18□□□□□ -1.1
BRCA1-225ENST00000586385 WRBO00258 174 aa8.18□□□□□ -1.1
BRCA1-225ENST00000586385 SLC25A6P12236 298 aa8.18□□□□□ -1.1
BRCA1-225ENST00000586385 PLP1P60201 277 aa8.18□□□□□ -1.1
BRCA1-225ENST00000586385 IL18Q14116 193 aa8.18□□□□□ -1.1
BRCA1-225ENST00000586385 PSG3Q16557 428 aa8.18□□□□□ -1.1
BRCA1-225ENST00000586385 TTC32Q5I0X7 151 aa8.18□□□□□ -1.1
BRCA1-225ENST00000586385 TMEM144Q7Z5S9 345 aa8.18□□□□□ -1.1
BRCA1-225ENST00000586385 LRTM2Q8N967 370 aa8.18□□□□□ -1.1
BRCA1-225ENST00000586385 TMEM263Q8WUH6 116 aaKnown RBP8.18□□□□□ -1.1
BRCA1-225ENST00000586385 GNPNAT1Q96EK6 184 aaPredicted RBP8.18□□□□□ -1.1
BRCA1-225ENST00000586385 DIRAS2Q96HU8 199 aa8.18□□□□□ -1.1
BRCA1-225ENST00000586385 MCUBQ9NWR8 336 aa8.18□□□□□ -1.1
BRCA1-225ENST00000586385 MRPS16Q9Y3D3 137 aaKnown RBP8.18□□□□□ -1.1
BRCA1-225ENST00000586385 A0A1W2PPQ1 181 aa8.17□□□□□ -1.1
BRCA1-225ENST00000586385 PMS2P5A8MQ11 134 aa8.17□□□□□ -1.1
BRCA1-225ENST00000586385 EPM2AB3EWF7 344 aa8.17□□□□□ -1.1
BRCA1-225ENST00000586385 SYNGR2O43760 224 aa8.17□□□□□ -1.1
BRCA1-225ENST00000586385 M6PRP20645 277 aa8.17□□□□□ -1.1
BRCA1-225ENST00000586385 LINC00315P59091 139 aa8.17□□□□□ -1.1
BRCA1-225ENST00000586385 RHOBP62745 196 aa8.17□□□□□ -1.1
BRCA1-225ENST00000586385 AKR1C1Q04828 323 aa8.17□□□□□ -1.1
BRCA1-225ENST00000586385 OR5I1Q13606 314 aa8.17□□□□□ -1.1
BRCA1-225ENST00000586385 SPANXN5Q5MJ07 72 aa8.17□□□□□ -1.1
BRCA1-225ENST00000586385 PATE2Q6UY27 113 aa8.17□□□□□ -1.1
BRCA1-225ENST00000586385 ZNF493Q6ZR52 646 aa8.17□□□□□ -1.1
BRCA1-225ENST00000586385 CYP2G1PQ6ZSU1 146 aa8.17□□□□□ -1.1
BRCA1-225ENST00000586385 ZBTB8BQ8NAP8 495 aaPredicted RBP8.17□□□□□ -1.1
BRCA1-225ENST00000586385 SCGB3A2Q96PL1 93 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms