RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 OR11H7Q8NGC8 314 aa8.33□□□□□ -1.08
LIG3-207ENST00000586119 TMEM170AQ8WVE7 144 aa8.33□□□□□ -1.08
LIG3-207ENST00000586119 C11orf1Q9H5F2 150 aa8.33□□□□□ -1.08
LIG3-207ENST00000586119 LSM5Q9Y4Y9 91 aaKnown RBP8.33□□□□□ -1.08
LIG3-207ENST00000586119 IGLV2-18A0A075B6J9 118 aa8.32□□□□□ -1.08
LIG3-207ENST00000586119 HELTA6NFD8 242 aa8.32□□□□□ -1.08
LIG3-207ENST00000586119 E5RGE8 158 aa8.32□□□□□ -1.08
LIG3-207ENST00000586119 H3BMM0 161 aa8.32□□□□□ -1.08
LIG3-207ENST00000586119 SCGB2A1O75556 95 aa8.32□□□□□ -1.08
LIG3-207ENST00000586119 IGLC1P0CG04 106 aa8.32□□□□□ -1.08
LIG3-207ENST00000586119 RND2P52198 227 aa8.32□□□□□ -1.08
LIG3-207ENST00000586119 RAP2BP61225 183 aa8.32□□□□□ -1.08
LIG3-207ENST00000586119 FGL1Q08830 312 aa8.32□□□□□ -1.08
LIG3-207ENST00000586119 TMEM41BQ5BJD5 291 aa8.32□□□□□ -1.08
LIG3-207ENST00000586119 SPANXN5Q5MJ07 72 aa8.32□□□□□ -1.08
LIG3-207ENST00000586119 GDF5OSQ5U4N7 250 aa8.32□□□□□ -1.08
LIG3-207ENST00000586119 TMEM14EPQ6UXP3 125 aa8.32□□□□□ -1.08
LIG3-207ENST00000586119 PPP1R1CQ8WVI7 109 aa8.32□□□□□ -1.08
LIG3-207ENST00000586119 NACAE9PAV3 2078 aa8.31□□□□□ -1.08
LIG3-207ENST00000586119 TRAV30A0A087WSZ9 112 aa8.31□□□□□ -1.08
LIG3-207ENST00000586119 CCNKO75909 580 aa8.31□□□□□ -1.08
LIG3-207ENST00000586119 MPC2O95563 127 aa8.31□□□□□ -1.08
LIG3-207ENST00000586119 IGKV3-20P01619 116 aa8.31□□□□□ -1.08
LIG3-207ENST00000586119 EMP1P54849 157 aa8.31□□□□□ -1.08
LIG3-207ENST00000586119 Q8WTZ3 238 aa8.31□□□□□ -1.08
LIG3-207ENST00000586119 FNDC10F2Z333 226 aa8.3□□□□□ -1.08
LIG3-207ENST00000586119 AMBPP02760 352 aa8.3□□□□□ -1.08
LIG3-207ENST00000586119 IL4P05112 153 aa8.3□□□□□ -1.08
LIG3-207ENST00000586119 MED14OSP0DP75 135 aa8.3□□□□□ -1.08
LIG3-207ENST00000586119 OR10J1P30954 320 aa8.3□□□□□ -1.08
LIG3-207ENST00000586119 LRRC37A5PQ49AS3 106 aa8.3□□□□□ -1.08
LIG3-207ENST00000586119 OR10P1Q8NGE3 313 aa8.3□□□□□ -1.08
LIG3-207ENST00000586119 THAP6Q8TBB0 222 aa8.3□□□□□ -1.08
LIG3-207ENST00000586119 NPIPB3Q92617 1050 aa8.3□□□□□ -1.08
LIG3-207ENST00000586119 NDUFAF3Q9BU61 184 aa8.3□□□□□ -1.08
LIG3-207ENST00000586119 GGACTQ9BVM4 153 aa8.3□□□□□ -1.08
LIG3-207ENST00000586119 SLC25A31Q9H0C2 315 aa8.3□□□□□ -1.08
LIG3-207ENST00000586119 LYRM2Q9NU23 88 aaPredicted RBP8.3□□□□□ -1.08
LIG3-207ENST00000586119 IGHV3OR16-12A0A075B7B8 117 aa8.29□□□□□ -1.08
LIG3-207ENST00000586119 PMS2P5A8MQ11 134 aa8.29□□□□□ -1.08
LIG3-207ENST00000586119 PRSS46E5RG02 174 aa8.29□□□□□ -1.08
LIG3-207ENST00000586119 H0YIZ8 118 aa8.29□□□□□ -1.08
LIG3-207ENST00000586119 H3BP45 60 aa8.29□□□□□ -1.08
LIG3-207ENST00000586119 BUB3O43684 328 aa8.29□□□□□ -1.08
LIG3-207ENST00000586119 CAV2P51636 162 aa8.29□□□□□ -1.08
LIG3-207ENST00000586119 YPEL3P61236 119 aaPredicted RBP8.29□□□□□ -1.08
LIG3-207ENST00000586119 DLK1P80370 383 aa8.29□□□□□ -1.08
LIG3-207ENST00000586119 CD300CQ08708 224 aa8.29□□□□□ -1.08
LIG3-207ENST00000586119 STX12Q86Y82 276 aa8.29□□□□□ -1.08
LIG3-207ENST00000586119 TMEM252Q8N6L7 170 aa8.29□□□□□ -1.08
LIG3-207ENST00000586119 OR51G1Q8NGK1 321 aa8.29□□□□□ -1.08
LIG3-207ENST00000586119 OR1S2Q8NGQ3 325 aa8.29□□□□□ -1.08
LIG3-207ENST00000586119 NARS2Q96I59 477 aaKnown RBP8.29□□□□□ -1.08
LIG3-207ENST00000586119 SLC35E1Q96K37 410 aa8.29□□□□□ -1.08
LIG3-207ENST00000586119 METTL15P1P0C7V9 234 aa8.28□□□□□ -1.08
LIG3-207ENST00000586119 P0DMU3 169 aa8.28□□□□□ -1.08
LIG3-207ENST00000586119 FAM231AP0DMU4 169 aa8.28□□□□□ -1.08
LIG3-207ENST00000586119 FAM231CP0DMU5 169 aa8.28□□□□□ -1.08
LIG3-207ENST00000586119 SULT1A1P50225 295 aa8.28□□□□□ -1.08
LIG3-207ENST00000586119 HBG1P69891 147 aa8.28□□□□□ -1.08
LIG3-207ENST00000586119 HBG2P69892 147 aa8.28□□□□□ -1.08
LIG3-207ENST00000586119 BAXQ07812 192 aa8.28□□□□□ -1.08
LIG3-207ENST00000586119 ZFP69Q49AA0 526 aa8.28□□□□□ -1.08
LIG3-207ENST00000586119 SIGLEC15Q6ZMC9 328 aa8.28□□□□□ -1.08
LIG3-207ENST00000586119 ZNF705AQ6ZN79 300 aaPredicted RBP8.28□□□□□ -1.08
LIG3-207ENST00000586119 ZNF575Q86XF7 245 aa8.28□□□□□ -1.08
LIG3-207ENST00000586119 ACY3Q96HD9 319 aa8.28□□□□□ -1.08
LIG3-207ENST00000586119 LINC00052Q96N35 136 aa8.28□□□□□ -1.08
LIG3-207ENST00000586119 OR5AC2Q9NZP5 309 aa8.28□□□□□ -1.08
LIG3-207ENST00000586119 HSPG2P98160 4391 aa8.28□□□□□ -1.08
LIG3-207ENST00000586119 FAM24AA6NFZ4 105 aa8.27□□□□□ -1.09
LIG3-207ENST00000586119 ZNF705FA8MVS1 300 aaPredicted RBP8.27□□□□□ -1.09
LIG3-207ENST00000586119 PRM2P04554 102 aa8.27□□□□□ -1.09
LIG3-207ENST00000586119 FABP1P07148 127 aa8.27□□□□□ -1.09
LIG3-207ENST00000586119 ZNF705DP0CH99 300 aaPredicted RBP8.27□□□□□ -1.09
LIG3-207ENST00000586119 ZNF705BP0CI00 300 aaPredicted RBP8.27□□□□□ -1.09
LIG3-207ENST00000586119 RD3LP0DJH9 198 aa8.27□□□□□ -1.09
LIG3-207ENST00000586119 PSG1P11464 419 aa8.27□□□□□ -1.09
LIG3-207ENST00000586119 HLA-DRB4P13762 266 aa8.27□□□□□ -1.09
LIG3-207ENST00000586119 S100A11P31949 105 aa8.27□□□□□ -1.09
LIG3-207ENST00000586119 AP2S1P53680 142 aaPredicted RBP8.27□□□□□ -1.09
LIG3-207ENST00000586119 GAMTQ14353 236 aa8.27□□□□□ -1.09
LIG3-207ENST00000586119 ATP6V1FQ16864 119 aa8.27□□□□□ -1.09
LIG3-207ENST00000586119 LGALS9BQ3B8N2 356 aa8.27□□□□□ -1.09
LIG3-207ENST00000586119 OR8G2PQ6IF36 304 aa8.27□□□□□ -1.09
LIG3-207ENST00000586119 OR2T35Q8NGX2 323 aa8.27□□□□□ -1.09
LIG3-207ENST00000586119 SLC35B3Q9H1N7 401 aa8.27□□□□□ -1.09
LIG3-207ENST00000586119 NRN1Q9NPD7 142 aa8.27□□□□□ -1.09
LIG3-207ENST00000586119 MBD2Q9UBB5 411 aa8.27□□□□□ -1.09
LIG3-207ENST00000586119 HLA-DRB4X5D2U9 266 aa8.27□□□□□ -1.09
LIG3-207ENST00000586119 IGSF23A1L1A6 192 aa8.26□□□□□ -1.09
LIG3-207ENST00000586119 F6UB75 175 aa8.26□□□□□ -1.09
LIG3-207ENST00000586119 TOMM40O96008 361 aa8.26□□□□□ -1.09
LIG3-207ENST00000586119 SPART-AS1P0CW21 52 aa8.26□□□□□ -1.09
LIG3-207ENST00000586119 HTN3P15516 51 aa8.26□□□□□ -1.09
LIG3-207ENST00000586119 SNRPD3P62318 126 aaKnown RBP8.26□□□□□ -1.09
LIG3-207ENST00000586119 FAM222AQ5U5X8 452 aa8.26□□□□□ -1.09
LIG3-207ENST00000586119 Q6ZR54 194 aa8.26□□□□□ -1.09
LIG3-207ENST00000586119 ACOT7LQ6ZUV0 252 aa8.26□□□□□ -1.09
LIG3-207ENST00000586119 TMEM144Q7Z5S9 345 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms