RNA–Protein interactions for RNA: ENST00000585437.1

ATG4D-202, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-202ENST00000585437 IZUMO1RA6ND01 250 aa6.52□□□□□ -1.37
ATG4D-202ENST00000585437 FAM74A7A6NL05 159 aa6.52□□□□□ -1.37
ATG4D-202ENST00000585437 B4DEV8 164 aa6.52□□□□□ -1.37
ATG4D-202ENST00000585437 TMEM250H0YL14 139 aa6.52□□□□□ -1.37
ATG4D-202ENST00000585437 I3L2K1 104 aa6.52□□□□□ -1.37
ATG4D-202ENST00000585437 CORTO00230 105 aa6.52□□□□□ -1.37
ATG4D-202ENST00000585437 OR2C1O95371 312 aa6.52□□□□□ -1.37
ATG4D-202ENST00000585437 CLEC3BP05452 202 aa6.52□□□□□ -1.37
ATG4D-202ENST00000585437 C8orf88P0DMB2 117 aa6.52□□□□□ -1.37
ATG4D-202ENST00000585437 RNASE2P10153 161 aaKnown RBP6.52□□□□□ -1.37
ATG4D-202ENST00000585437 FOLR2P14207 255 aa6.52□□□□□ -1.37
ATG4D-202ENST00000585437 ADMP35318 185 aa6.52□□□□□ -1.37
ATG4D-202ENST00000585437 GPX4P36969 197 aaPredicted RBP6.52□□□□□ -1.37
ATG4D-202ENST00000585437 RPL29P47914 159 aaKnown RBP6.52□□□□□ -1.37
ATG4D-202ENST00000585437 NPBWR1P48145 328 aa6.52□□□□□ -1.37
ATG4D-202ENST00000585437 B2MP61769 119 aa6.52□□□□□ -1.37
ATG4D-202ENST00000585437 RHOBP62745 196 aa6.52□□□□□ -1.37
ATG4D-202ENST00000585437 CCL20P78556 96 aa6.52□□□□□ -1.37
ATG4D-202ENST00000585437 MEF2BQ02080 365 aaPredicted RBP6.52□□□□□ -1.37
ATG4D-202ENST00000585437 FAM74A3Q4VXF1 159 aa6.52□□□□□ -1.37
ATG4D-202ENST00000585437 ETFRF1Q6IPR1 90 aa6.52□□□□□ -1.37
ATG4D-202ENST00000585437 LCN12Q6JVE5 192 aa6.52□□□□□ -1.37
ATG4D-202ENST00000585437 UNQ9165/PRO28630Q6UXU0 137 aa6.52□□□□□ -1.37
ATG4D-202ENST00000585437 TMEM144Q7Z5S9 345 aa6.52□□□□□ -1.37
ATG4D-202ENST00000585437 C15orf54Q8N8G6 183 aa6.52□□□□□ -1.37
ATG4D-202ENST00000585437 CYB561D1Q8N8Q1 229 aa6.52□□□□□ -1.37
ATG4D-202ENST00000585437 TMEM170AQ8WVE7 144 aa6.52□□□□□ -1.37
ATG4D-202ENST00000585437 TMEM190Q8WZ59 177 aa6.52□□□□□ -1.37
ATG4D-202ENST00000585437 RAB24Q969Q5 203 aa6.52□□□□□ -1.37
ATG4D-202ENST00000585437 MGST2Q99735 147 aa6.52□□□□□ -1.37
ATG4D-202ENST00000585437 RARRES2Q99969 163 aa6.52□□□□□ -1.37
ATG4D-202ENST00000585437 TUBA4BQ9H853 241 aa6.52□□□□□ -1.37
ATG4D-202ENST00000585437 RPS10P5Q9NQ39 176 aa6.52□□□□□ -1.37
ATG4D-202ENST00000585437 C21orf62Q9NYP8 219 aa6.52□□□□□ -1.37
ATG4D-202ENST00000585437 A0A087WWC5 75 aa6.51□□□□□ -1.37
ATG4D-202ENST00000585437 CTSGP08311 255 aa6.51□□□□□ -1.37
ATG4D-202ENST00000585437 NHLRC4P0CG21 123 aaPredicted RBP6.51□□□□□ -1.37
ATG4D-202ENST00000585437 ATF4P18848 351 aaPredicted RBP6.51□□□□□ -1.37
ATG4D-202ENST00000585437 CBLN1P23435 193 aa6.51□□□□□ -1.37
ATG4D-202ENST00000585437 FGF8P55075 233 aaPredicted RBP6.51□□□□□ -1.37
ATG4D-202ENST00000585437 DEFB114Q30KQ6 69 aa6.51□□□□□ -1.37
ATG4D-202ENST00000585437 CD300EQ496F6 205 aaPredicted RBP6.51□□□□□ -1.37
ATG4D-202ENST00000585437 FAM106AQ4KMX7 169 aa6.51□□□□□ -1.37
ATG4D-202ENST00000585437 SLC16A13Q7RTY0 426 aa6.51□□□□□ -1.37
ATG4D-202ENST00000585437 TVP23CQ96ET8 276 aa6.51□□□□□ -1.37
ATG4D-202ENST00000585437 RNF2Q99496 336 aa6.51□□□□□ -1.37
ATG4D-202ENST00000585437 CHRDL1Q9BU40 450 aa6.51□□□□□ -1.37
ATG4D-202ENST00000585437 C19orf73Q9NVV2 129 aa6.51□□□□□ -1.37
ATG4D-202ENST00000585437 TECRQ9NZ01 308 aaKnown RBP6.51□□□□□ -1.37
ATG4D-202ENST00000585437 PUS1Q9Y606 427 aaKnown RBP eCLIP6.51□□□□□ -1.37
ATG4D-202ENST00000585437 ARL2-SNX15V9GYD0 113 aa6.51□□□□□ -1.37
ATG4D-202ENST00000585437 C7orf77A4D0Y5 90 aa6.5□□□□□ -1.37
ATG4D-202ENST00000585437 OR2T8A6NH00 312 aa6.5□□□□□ -1.37
ATG4D-202ENST00000585437 ZNF785A8K8V0 405 aa6.5□□□□□ -1.37
ATG4D-202ENST00000585437 H3BQ15 152 aa6.5□□□□□ -1.37
ATG4D-202ENST00000585437 NDUFA4O00483 81 aa6.5□□□□□ -1.37
ATG4D-202ENST00000585437 NUPL2O15504 423 aaKnown RBP6.5□□□□□ -1.37
ATG4D-202ENST00000585437 PDE6DO43924 150 aa6.5□□□□□ -1.37
ATG4D-202ENST00000585437 CXorf1O96002 111 aa6.5□□□□□ -1.37
ATG4D-202ENST00000585437 FRMD6-AS1P0C7T7 363 aa6.5□□□□□ -1.37
ATG4D-202ENST00000585437 STAG3L2P0CL84 134 aa6.5□□□□□ -1.37
ATG4D-202ENST00000585437 STAG3L3P0CL85 134 aa6.5□□□□□ -1.37
ATG4D-202ENST00000585437 IGHV4-30-4P0DP06 118 aa6.5□□□□□ -1.37
ATG4D-202ENST00000585437 CEBPGP53567 150 aa6.5□□□□□ -1.37
ATG4D-202ENST00000585437 TAS2R45P59539 299 aa6.5□□□□□ -1.37
ATG4D-202ENST00000585437 MIC13Q5XKP0 118 aa6.5□□□□□ -1.37
ATG4D-202ENST00000585437 TMEM88Q6PEY1 159 aa6.5□□□□□ -1.37
ATG4D-202ENST00000585437 SSX7Q7RTT5 188 aa6.5□□□□□ -1.37
ATG4D-202ENST00000585437 CBLN2Q8IUK8 224 aa6.5□□□□□ -1.37
ATG4D-202ENST00000585437 IQCF2Q8IXL9 164 aa6.5□□□□□ -1.37
ATG4D-202ENST00000585437 STPG3Q8N7X2 389 aa6.5□□□□□ -1.37
ATG4D-202ENST00000585437 TXN2Q99757 166 aa6.5□□□□□ -1.37
ATG4D-202ENST00000585437 MLXQ9UH92 298 aa6.5□□□□□ -1.37
ATG4D-202ENST00000585437 IGHV3-21A0A0B4J1V1 117 aa6.49□□□□□ -1.37
ATG4D-202ENST00000585437 CXorf65A6NEN9 183 aa6.49□□□□□ -1.37
ATG4D-202ENST00000585437 F6UZH7 168 aa6.49□□□□□ -1.37
ATG4D-202ENST00000585437 SELENOTP62341 195 aa6.49□□□□□ -1.37
ATG4D-202ENST00000585437 PRR20EP86478 221 aa6.49□□□□□ -1.37
ATG4D-202ENST00000585437 PRR20CP86479 221 aa6.49□□□□□ -1.37
ATG4D-202ENST00000585437 PRR20DP86480 221 aa6.49□□□□□ -1.37
ATG4D-202ENST00000585437 PRR20BP86481 221 aa6.49□□□□□ -1.37
ATG4D-202ENST00000585437 PRR20AP86496 221 aa6.49□□□□□ -1.37
ATG4D-202ENST00000585437 FLI1Q01543 452 aaPredicted RBP6.49□□□□□ -1.37
ATG4D-202ENST00000585437 TM4SF20Q53R12 229 aa6.49□□□□□ -1.37
ATG4D-202ENST00000585437 CYP2G1PQ6ZSU1 146 aa6.49□□□□□ -1.37
ATG4D-202ENST00000585437 TMEM61Q8N0U2 210 aa6.49□□□□□ -1.37
ATG4D-202ENST00000585437 DYNLRB2Q8TF09 96 aa6.49□□□□□ -1.37
ATG4D-202ENST00000585437 PFDN5Q99471 154 aa6.49□□□□□ -1.37
ATG4D-202ENST00000585437 MRPL32Q9BYC8 188 aaKnown RBP6.49□□□□□ -1.37
ATG4D-202ENST00000585437 DAZ1Q9NQZ3 744 aaKnown RBP6.49□□□□□ -1.37
ATG4D-202ENST00000585437 TMEM167BQ9NRX6 74 aa6.49□□□□□ -1.37
ATG4D-202ENST00000585437 GAR1Q9NY12 217 aaKnown RBP6.49□□□□□ -1.37
ATG4D-202ENST00000585437 MRPL27Q9P0M9 148 aaKnown RBP6.49□□□□□ -1.37
ATG4D-202ENST00000585437 NAT8Q9UHE5 227 aa6.49□□□□□ -1.37
ATG4D-202ENST00000585437 SLC45A2Q9UMX9 530 aa6.49□□□□□ -1.37
ATG4D-202ENST00000585437 UFC1Q9Y3C8 167 aa6.49□□□□□ -1.37
ATG4D-202ENST00000585437 CSMD3Q7Z407 3707 aa6.49□□□□□ -1.37
ATG4D-202ENST00000585437 DYNC2H1Q8NCM8 4307 aaKnown RBP6.48□□□□□ -1.37
ATG4D-202ENST00000585437 IGHV3-35A0A0C4DH35 117 aa6.48□□□□□ -1.37
ATG4D-202ENST00000585437 ZNF320A2RRD8 509 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms