RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 ZNF343Q6P1L6 599 aa8.08□□□□□ -1.12
LIG3-203ENST00000585370 LYPD1Q8N2G4 141 aa8.08□□□□□ -1.12
LIG3-203ENST00000585370 ZNF418Q8TF45 676 aaPredicted RBP8.08□□□□□ -1.12
LIG3-203ENST00000585370 HIST1H2BAQ96A08 127 aa8.08□□□□□ -1.12
LIG3-203ENST00000585370 ANAPC16Q96DE5 110 aa8.08□□□□□ -1.12
LIG3-203ENST00000585370 PRSS22Q9GZN4 317 aa8.08□□□□□ -1.12
LIG3-203ENST00000585370 HELTA6NFD8 242 aa8.07□□□□□ -1.12
LIG3-203ENST00000585370 OR2T8A6NH00 312 aa8.07□□□□□ -1.12
LIG3-203ENST00000585370 ZNF98A6NK75 572 aa8.07□□□□□ -1.12
LIG3-203ENST00000585370 SH2D7A6NKC9 451 aaPredicted RBP8.07□□□□□ -1.12
LIG3-203ENST00000585370 C9JCJ5 164 aa8.07□□□□□ -1.12
LIG3-203ENST00000585370 TSPAN4O14817 238 aa8.07□□□□□ -1.12
LIG3-203ENST00000585370 PPP1R2P9O14990 202 aa8.07□□□□□ -1.12
LIG3-203ENST00000585370 TGOLN2O43493 480 aa8.07□□□□□ -1.12
LIG3-203ENST00000585370 OR10J4P0C629 311 aa8.07□□□□□ -1.12
LIG3-203ENST00000585370 GP9P14770 177 aa8.07□□□□□ -1.12
LIG3-203ENST00000585370 NPPCP23582 126 aa8.07□□□□□ -1.12
LIG3-203ENST00000585370 TAS2R60P59551 318 aa8.07□□□□□ -1.12
LIG3-203ENST00000585370 BLCAPP62952 87 aa8.07□□□□□ -1.12
LIG3-203ENST00000585370 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.07□□□□□ -1.12
LIG3-203ENST00000585370 OR4F17Q8NGA8 305 aa8.07□□□□□ -1.12
LIG3-203ENST00000585370 C20orf24Q9BUV8 137 aa8.07□□□□□ -1.12
LIG3-203ENST00000585370 NPFFR1Q9GZQ6 430 aa8.07□□□□□ -1.12
LIG3-203ENST00000585370 ESM1Q9NQ30 184 aa8.07□□□□□ -1.12
LIG3-203ENST00000585370 RABAC1Q9UI14 185 aa8.07□□□□□ -1.12
LIG3-203ENST00000585370 CMYA5Q8N3K9 4069 aa8.07□□□□□ -1.12
LIG3-203ENST00000585370 MDFIC2A0A1B0GVS7 189 aa8.06□□□□□ -1.12
LIG3-203ENST00000585370 SCO2A0A1W2PP80 73 aa8.06□□□□□ -1.12
LIG3-203ENST00000585370 CLDN34H7C241 214 aa8.06□□□□□ -1.12
LIG3-203ENST00000585370 IGLV1-40P01703 118 aa8.06□□□□□ -1.12
LIG3-203ENST00000585370 PYYP10082 97 aa8.06□□□□□ -1.12
LIG3-203ENST00000585370 RPL7P18124 248 aaKnown RBP8.06□□□□□ -1.12
LIG3-203ENST00000585370 ADMP35318 185 aa8.06□□□□□ -1.12
LIG3-203ENST00000585370 RPL23P62829 140 aaKnown RBP8.06□□□□□ -1.12
LIG3-203ENST00000585370 PDE6HQ13956 83 aa8.06□□□□□ -1.12
LIG3-203ENST00000585370 KIAA0141Q14154 515 aaPredicted RBP8.06□□□□□ -1.12
LIG3-203ENST00000585370 ADIRFQ15847 76 aa8.06□□□□□ -1.12
LIG3-203ENST00000585370 TMEM88Q6PEY1 159 aa8.06□□□□□ -1.12
LIG3-203ENST00000585370 CBLN2Q8IUK8 224 aa8.06□□□□□ -1.12
LIG3-203ENST00000585370 ARL6IP6Q8N6S5 226 aa8.06□□□□□ -1.12
LIG3-203ENST00000585370 C3orf56Q8N813 242 aa8.06□□□□□ -1.12
LIG3-203ENST00000585370 GPR82Q96P67 336 aa8.06□□□□□ -1.12
LIG3-203ENST00000585370 MS4A10Q96PG2 267 aa8.06□□□□□ -1.12
LIG3-203ENST00000585370 S4R3C0 116 aa8.06□□□□□ -1.12
LIG3-203ENST00000585370 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.05□□□□□ -1.12
LIG3-203ENST00000585370 WIPF1O43516 503 aa8.05□□□□□ -1.12
LIG3-203ENST00000585370 CRYBB3P26998 211 aa8.05□□□□□ -1.12
LIG3-203ENST00000585370 GPR183P32249 361 aa8.05□□□□□ -1.12
LIG3-203ENST00000585370 MYCNOSP40205 109 aa8.05□□□□□ -1.12
LIG3-203ENST00000585370 CNN1P51911 297 aaKnown RBP8.05□□□□□ -1.12
LIG3-203ENST00000585370 TPPP2P59282 170 aa8.05□□□□□ -1.12
LIG3-203ENST00000585370 SLC35B1P78383 322 aa8.05□□□□□ -1.12
LIG3-203ENST00000585370 CFHR3Q02985 330 aa8.05□□□□□ -1.12
LIG3-203ENST00000585370 RNF212Q495C1 297 aa8.05□□□□□ -1.12
LIG3-203ENST00000585370 C1orf194Q5T5A4 169 aa8.05□□□□□ -1.12
LIG3-203ENST00000585370 CLEC19AQ6UXS0 136 aa8.05□□□□□ -1.12
LIG3-203ENST00000585370 ZNF329Q86UD4 541 aa8.05□□□□□ -1.12
LIG3-203ENST00000585370 C5orf17Q8NAS9 161 aa8.05□□□□□ -1.12
LIG3-203ENST00000585370 C2CD4CQ8TF44 421 aa8.05□□□□□ -1.12
LIG3-203ENST00000585370 CCDC140Q96MF4 163 aa8.05□□□□□ -1.12
LIG3-203ENST00000585370 CHRDL1Q9BU40 450 aa8.05□□□□□ -1.12
LIG3-203ENST00000585370 ELOVL1Q9BW60 279 aa8.05□□□□□ -1.12
LIG3-203ENST00000585370 OTORQ9NRC9 128 aa8.05□□□□□ -1.12
LIG3-203ENST00000585370 EPDR1Q9UM22 224 aa8.05□□□□□ -1.12
LIG3-203ENST00000585370 PGPA6NDG6 321 aa8.04□□□□□ -1.12
LIG3-203ENST00000585370 COLCA2A8K830 154 aa8.04□□□□□ -1.12
LIG3-203ENST00000585370 GGTLC3B5MD39 225 aa8.04□□□□□ -1.12
LIG3-203ENST00000585370 IGHV3-23P01764 117 aa8.04□□□□□ -1.12
LIG3-203ENST00000585370 IGHG4P01861 327 aa8.04□□□□□ -1.12
LIG3-203ENST00000585370 PF4V1P10720 104 aa8.04□□□□□ -1.12
LIG3-203ENST00000585370 AKR1C3P42330 323 aa8.04□□□□□ -1.12
LIG3-203ENST00000585370 RPL35P42766 123 aaKnown RBP8.04□□□□□ -1.12
LIG3-203ENST00000585370 MEOX2P50222 304 aa8.04□□□□□ -1.12
LIG3-203ENST00000585370 RANP62826 216 aaKnown RBP8.04□□□□□ -1.12
LIG3-203ENST00000585370 PSG9Q00887 426 aa8.04□□□□□ -1.12
LIG3-203ENST00000585370 USF2Q15853 346 aaPredicted RBP8.04□□□□□ -1.12
LIG3-203ENST00000585370 TOMM20LQ6UXN7 152 aa8.04□□□□□ -1.12
LIG3-203ENST00000585370 LINC01551Q86U37 167 aa8.04□□□□□ -1.12
LIG3-203ENST00000585370 BLNKQ8WV28 456 aa8.04□□□□□ -1.12
LIG3-203ENST00000585370 SMIM12Q96EX1 92 aa8.04□□□□□ -1.12
LIG3-203ENST00000585370 BTF3L4Q96K17 158 aa8.04□□□□□ -1.12
LIG3-203ENST00000585370 JMJD8Q96S16 334 aa8.04□□□□□ -1.12
LIG3-203ENST00000585370 LINC00527Q9UJ94 153 aa8.04□□□□□ -1.12
LIG3-203ENST00000585370 TGP01266 2768 aa8.03□□□□□ -1.12
LIG3-203ENST00000585370 TRBV19A0A075B6N1 114 aa8.03□□□□□ -1.12
LIG3-203ENST00000585370 NDUFA4O00483 81 aa8.03□□□□□ -1.12
LIG3-203ENST00000585370 PEX7O00628 323 aa8.03□□□□□ -1.12
LIG3-203ENST00000585370 HOXA3O43365 443 aaPredicted RBP8.03□□□□□ -1.12
LIG3-203ENST00000585370 ZNF253O75346 499 aa8.03□□□□□ -1.12
LIG3-203ENST00000585370 SLC25A5P05141 298 aaKnown RBP8.03□□□□□ -1.12
LIG3-203ENST00000585370 ELANEP08246 267 aa8.03□□□□□ -1.12
LIG3-203ENST00000585370 IGLC2P0DOY2 106 aa8.03□□□□□ -1.12
LIG3-203ENST00000585370 ARL3P36405 182 aa8.03□□□□□ -1.12
LIG3-203ENST00000585370 GNG4P50150 75 aa8.03□□□□□ -1.12
LIG3-203ENST00000585370 Q8N2B8 174 aa8.03□□□□□ -1.12
LIG3-203ENST00000585370 OCC1Q8TAD7 63 aa8.03□□□□□ -1.12
LIG3-203ENST00000585370 CMTM2Q8TAZ6 248 aa8.03□□□□□ -1.12
LIG3-203ENST00000585370 ISOC2Q96AB3 205 aa8.03□□□□□ -1.12
LIG3-203ENST00000585370 NOL4LQ96MY1 436 aaPredicted RBP8.03□□□□□ -1.12
LIG3-203ENST00000585370 OR5B12Q96R08 314 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms