RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 GIG44P09565 113 aaPredicted RBP9.01□□□□□ -0.97
SS18-225ENST00000585121 METTL15P1P0C7V9 234 aa9.01□□□□□ -0.97
SS18-225ENST00000585121 HLA-DRB4P13762 266 aa9.01□□□□□ -0.97
SS18-225ENST00000585121 C4BPBP20851 252 aa9.01□□□□□ -0.97
SS18-225ENST00000585121 GATA2P23769 480 aaPredicted RBP9.01□□□□□ -0.97
SS18-225ENST00000585121 IL15RAQ13261 267 aa9.01□□□□□ -0.97
SS18-225ENST00000585121 SPATA31B1PQ5VZV4 182 aa9.01□□□□□ -0.97
SS18-225ENST00000585121 EBLN2Q6P2I7 272 aa9.01□□□□□ -0.97
SS18-225ENST00000585121 TMEM14EPQ6UXP3 125 aa9.01□□□□□ -0.97
SS18-225ENST00000585121 FOXI2Q6ZQN5 318 aa9.01□□□□□ -0.97
SS18-225ENST00000585121 C16orf92Q96LL3 132 aa9.01□□□□□ -0.97
SS18-225ENST00000585121 RSG1Q9BU20 258 aa9.01□□□□□ -0.97
SS18-225ENST00000585121 CLEC5AQ9NY25 188 aa9.01□□□□□ -0.97
SS18-225ENST00000585121 HLA-DRB4X5D2U9 266 aa9.01□□□□□ -0.97
SS18-225ENST00000585121 IGHV4-28A0A0C4DH34 117 aa9□□□□□ -0.97
SS18-225ENST00000585121 ZNF705EA8MWA4 302 aaPredicted RBP9□□□□□ -0.97
SS18-225ENST00000585121 G3V3Q6 166 aa9□□□□□ -0.97
SS18-225ENST00000585121 SMLR1H3BR10 107 aa9□□□□□ -0.97
SS18-225ENST00000585121 HYPMO75409 117 aa9□□□□□ -0.97
SS18-225ENST00000585121 MBPP02686 304 aaPredicted RBP9□□□□□ -0.97
SS18-225ENST00000585121 PAX9P55771 341 aa9□□□□□ -0.97
SS18-225ENST00000585121 NANOS2P60321 138 aaKnown RBP9□□□□□ -0.97
SS18-225ENST00000585121 PPP1R1CQ8WVI7 109 aa9□□□□□ -0.97
SS18-225ENST00000585121 GGACTQ9BVM4 153 aa9□□□□□ -0.97
SS18-225ENST00000585121 SAV1Q9H4B6 383 aaPredicted RBP9□□□□□ -0.97
SS18-225ENST00000585121 RPRMQ9NS64 109 aa9□□□□□ -0.97
SS18-225ENST00000585121 XCL2Q9UBD3 114 aa9□□□□□ -0.97
SS18-225ENST00000585121 RNF24Q9Y225 148 aa9□□□□□ -0.97
SS18-225ENST00000585121 HIGD1AQ9Y241 93 aa9□□□□□ -0.97
SS18-225ENST00000585121 AGRNO00468 2067 aa9□□□□□ -0.97
SS18-225ENST00000585121 PMS2P5A8MQ11 134 aa9□□□□□ -0.97
SS18-225ENST00000585121 LY6G6CO95867 125 aa9□□□□□ -0.97
SS18-225ENST00000585121 Q5BKY6 102 aa9□□□□□ -0.97
SS18-225ENST00000585121 TEPPQ6URK8 271 aa9□□□□□ -0.97
SS18-225ENST00000585121 Q8NAQ8 132 aa9□□□□□ -0.97
SS18-225ENST00000585121 OR11H4Q8NGC9 324 aa9□□□□□ -0.97
SS18-225ENST00000585121 SLC25A32Q9H2D1 315 aa9□□□□□ -0.97
SS18-225ENST00000585121 DOK5Q9P104 306 aa9□□□□□ -0.97
SS18-225ENST00000585121 RCL1Q9Y2P8 373 aaKnown RBP9□□□□□ -0.97
SS18-225ENST00000585121 LSM5Q9Y4Y9 91 aaKnown RBP9□□□□□ -0.97
SS18-225ENST00000585121 SOCS3O14543 225 aa8.99□□□□□ -0.97
SS18-225ENST00000585121 MPC2O95563 127 aa8.99□□□□□ -0.97
SS18-225ENST00000585121 IGKV3-20P01619 116 aa8.99□□□□□ -0.97
SS18-225ENST00000585121 OR5G3P0C626 314 aa8.99□□□□□ -0.97
SS18-225ENST00000585121 LINC00869P0C866 280 aa8.99□□□□□ -0.97
SS18-225ENST00000585121 PVALBP20472 110 aaPredicted RBP8.99□□□□□ -0.97
SS18-225ENST00000585121 NKX2-5P52952 324 aaPredicted RBP8.99□□□□□ -0.97
SS18-225ENST00000585121 TMEM182Q6ZP80 229 aaPredicted RBP8.99□□□□□ -0.97
SS18-225ENST00000585121 CSNK1G2-AS1Q8NCQ2 148 aa8.99□□□□□ -0.97
SS18-225ENST00000585121 OR4B1Q8NGF8 309 aa8.99□□□□□ -0.97
SS18-225ENST00000585121 THAP6Q8TBB0 222 aa8.99□□□□□ -0.97
SS18-225ENST00000585121 LINC00476Q8WZB0 136 aa8.99□□□□□ -0.97
SS18-225ENST00000585121 HRH4Q9H3N8 390 aa8.99□□□□□ -0.97
SS18-225ENST00000585121 C11orf94C9JXX5 98 aa8.98□□□□□ -0.97
SS18-225ENST00000585121 DEDDO75618 318 aa8.98□□□□□ -0.97
SS18-225ENST00000585121 RLN2P04090 185 aa8.98□□□□□ -0.97
SS18-225ENST00000585121 PET100P0DJ07 73 aa8.98□□□□□ -0.97
SS18-225ENST00000585121 RPL7P18124 248 aaKnown RBP8.98□□□□□ -0.97
SS18-225ENST00000585121 C2CD4CQ8TF44 421 aa8.98□□□□□ -0.97
SS18-225ENST00000585121 CLUHP3Q96NS8 147 aa8.98□□□□□ -0.97
SS18-225ENST00000585121 SHANK2-AS3Q9BTD1 123 aa8.98□□□□□ -0.97
SS18-225ENST00000585121 SLC25A39Q9BZJ4 359 aaPredicted RBP8.98□□□□□ -0.97
SS18-225ENST00000585121 X6R8D5 127 aa8.98□□□□□ -0.97
SS18-225ENST00000585121 HYDINQ4G0P3 5121 aa8.97□□□□□ -0.97
SS18-225ENST00000585121 H3BRN7 92 aa8.97□□□□□ -0.97
SS18-225ENST00000585121 RBMY1A1P0DJD3 496 aaKnown RBP8.97□□□□□ -0.97
SS18-225ENST00000585121 RBMY1CP0DJD4 496 aa8.97□□□□□ -0.97
SS18-225ENST00000585121 CAV2P51636 162 aa8.97□□□□□ -0.97
SS18-225ENST00000585121 PLP1P60201 277 aa8.97□□□□□ -0.97
SS18-225ENST00000585121 PSG9Q00887 426 aa8.97□□□□□ -0.97
SS18-225ENST00000585121 RAB31Q13636 194 aa8.97□□□□□ -0.97
SS18-225ENST00000585121 RBMY1FQ15415 496 aaKnown RBP8.97□□□□□ -0.97
SS18-225ENST00000585121 LGALSLQ3ZCW2 172 aaPredicted RBP8.97□□□□□ -0.97
SS18-225ENST00000585121 PXDC1Q5TGL8 231 aa8.97□□□□□ -0.97
SS18-225ENST00000585121 GDF5OSQ5U4N7 250 aa8.97□□□□□ -0.97
SS18-225ENST00000585121 ZNF546Q86UE3 836 aa8.97□□□□□ -0.97
SS18-225ENST00000585121 C9orf62Q8N4C0 152 aa8.97□□□□□ -0.97
SS18-225ENST00000585121 LRRC20Q8TCA0 184 aa8.97□□□□□ -0.97
SS18-225ENST00000585121 SCRT1Q9BWW7 348 aa8.97□□□□□ -0.97
SS18-225ENST00000585121 ARL6Q9H0F7 186 aa8.97□□□□□ -0.97
SS18-225ENST00000585121 K7EPK0 472 aa8.96□□□□□ -0.97
SS18-225ENST00000585121 TCTAP57738 103 aa8.96□□□□□ -0.97
SS18-225ENST00000585121 DEFB1P60022 68 aa8.96□□□□□ -0.97
SS18-225ENST00000585121 S100A10P60903 97 aa8.96□□□□□ -0.97
SS18-225ENST00000585121 SLC38A11Q08AI6 406 aa8.96□□□□□ -0.97
SS18-225ENST00000585121 FAM78BQ5VT40 261 aa8.96□□□□□ -0.97
SS18-225ENST00000585121 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.96□□□□□ -0.97
SS18-225ENST00000585121 RNF126Q9BV68 326 aa8.96□□□□□ -0.97
SS18-225ENST00000585121 HSPB11Q9Y547 144 aa8.96□□□□□ -0.97
SS18-225ENST00000585121 IGHV3OR16-12A0A075B7B8 117 aa8.95□□□□□ -0.98
SS18-225ENST00000585121 A0A0J9YX75 114 aa8.95□□□□□ -0.98
SS18-225ENST00000585121 AGPAT2O15120 278 aa8.95□□□□□ -0.98
SS18-225ENST00000585121 DUSP14O95147 198 aaKnown RBP8.95□□□□□ -0.98
SS18-225ENST00000585121 HLA-DMBP28068 263 aa8.95□□□□□ -0.98
SS18-225ENST00000585121 FXYD7P58549 80 aa8.95□□□□□ -0.98
SS18-225ENST00000585121 RAB32Q13637 225 aa8.95□□□□□ -0.98
SS18-225ENST00000585121 LRRC37A5PQ49AS3 106 aa8.95□□□□□ -0.98
SS18-225ENST00000585121 ARV1Q9H2C2 271 aa8.95□□□□□ -0.98
SS18-225ENST00000585121 TNFSF18Q9UNG2 199 aa8.95□□□□□ -0.98
SS18-225ENST00000585121 GOLT1BQ9Y3E0 138 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms