RNA–Protein interactions for RNA: ENST00000585031.2

TOP3A-220, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-220ENST00000585031 PSENENQ9NZ42 101 aa12.95□□□□□ -0.34
TOP3A-220ENST00000585031 F11RQ9Y624 299 aaKnown RBP12.95□□□□□ -0.34
TOP3A-220ENST00000585031 IGSF23A1L1A6 192 aa12.94□□□□□ -0.34
TOP3A-220ENST00000585031 DFFBO76075 338 aa12.94□□□□□ -0.34
TOP3A-220ENST00000585031 IAPPP10997 89 aa12.94□□□□□ -0.34
TOP3A-220ENST00000585031 ZNF266Q14584 549 aa12.94□□□□□ -0.34
TOP3A-220ENST00000585031 OR52E5Q8NH55 327 aa12.94□□□□□ -0.34
TOP3A-220ENST00000585031 RBKSQ9H477 322 aa12.94□□□□□ -0.34
TOP3A-220ENST00000585031 IGHV3-66A0A0C4DH42 116 aa12.93□□□□□ -0.34
TOP3A-220ENST00000585031 CEBPZOSA8MTT3 80 aa12.93□□□□□ -0.34
TOP3A-220ENST00000585031 YIF1AO95070 293 aa12.93□□□□□ -0.34
TOP3A-220ENST00000585031 SULT1A1P50225 295 aa12.93□□□□□ -0.34
TOP3A-220ENST00000585031 PAX9P55771 341 aa12.93□□□□□ -0.34
TOP3A-220ENST00000585031 SPCS3P61009 180 aa12.93□□□□□ -0.34
TOP3A-220ENST00000585031 AARDQ4LEZ3 155 aa12.93□□□□□ -0.34
TOP3A-220ENST00000585031 C1orf134Q5TEV5 83 aa12.93□□□□□ -0.34
TOP3A-220ENST00000585031 RPL7L1Q6DKI1 246 aaKnown RBP12.93□□□□□ -0.34
TOP3A-220ENST00000585031 STHQ8IWL8 128 aa12.93□□□□□ -0.34
TOP3A-220ENST00000585031 OR1S2Q8NGQ3 325 aa12.93□□□□□ -0.34
TOP3A-220ENST00000585031 SMIM3Q9BZL3 60 aa12.93□□□□□ -0.34
TOP3A-220ENST00000585031 NDUFA4L2Q9NRX3 87 aa12.93□□□□□ -0.34
TOP3A-220ENST00000585031 RPS10-NUDT3A0A1W2PQS6 291 aa12.92□□□□□ -0.34
TOP3A-220ENST00000585031 LINC00862A6NCI5 91 aa12.92□□□□□ -0.34
TOP3A-220ENST00000585031 KNCNA6PVL3 124 aa12.92□□□□□ -0.34
TOP3A-220ENST00000585031 IFNA10P01566 189 aa12.92□□□□□ -0.34
TOP3A-220ENST00000585031 IFNA17P01571 189 aa12.92□□□□□ -0.34
TOP3A-220ENST00000585031 IGHV3-48P01763 117 aa12.92□□□□□ -0.34
TOP3A-220ENST00000585031 HBG1P69891 147 aa12.92□□□□□ -0.34
TOP3A-220ENST00000585031 HBG2P69892 147 aa12.92□□□□□ -0.34
TOP3A-220ENST00000585031 RPP30P78346 268 aaKnown RBP12.92□□□□□ -0.34
TOP3A-220ENST00000585031 NHLH2Q02577 135 aa12.92□□□□□ -0.34
TOP3A-220ENST00000585031 DTD1Q8TEA8 209 aa12.92□□□□□ -0.34
TOP3A-220ENST00000585031 VSIRQ9H7M9 311 aa12.92□□□□□ -0.34
TOP3A-220ENST00000585031 FKBP11Q9NYL4 201 aa12.92□□□□□ -0.34
TOP3A-220ENST00000585031 PRNDQ9UKY0 176 aa12.92□□□□□ -0.34
TOP3A-220ENST00000585031 TMEM50AO95807 157 aa12.91□□□□□ -0.34
TOP3A-220ENST00000585031 PAFAH1B2P68402 229 aa12.91□□□□□ -0.34
TOP3A-220ENST00000585031 SLC7A5P1Q8MH63 180 aa12.91□□□□□ -0.34
TOP3A-220ENST00000585031 STRAPQ9Y3F4 350 aaKnown RBP12.91□□□□□ -0.34
TOP3A-220ENST00000585031 MYCBP2O75592 4640 aa12.9□□□□□ -0.34
TOP3A-220ENST00000585031 H3BP45 60 aa12.9□□□□□ -0.34
TOP3A-220ENST00000585031 DNASE2O00115 360 aaPredicted RBP12.9□□□□□ -0.34
TOP3A-220ENST00000585031 CST7O76096 145 aa12.9□□□□□ -0.34
TOP3A-220ENST00000585031 FGF2P09038 288 aa12.9□□□□□ -0.34
TOP3A-220ENST00000585031 S100A1P23297 94 aa12.9□□□□□ -0.34
TOP3A-220ENST00000585031 SPANXN5Q5MJ07 72 aa12.9□□□□□ -0.34
TOP3A-220ENST00000585031 OR5C1Q8NGR4 320 aa12.9□□□□□ -0.34
TOP3A-220ENST00000585031 ATP5SQ99766 215 aa12.9□□□□□ -0.34
TOP3A-220ENST00000585031 HINT2Q9BX68 163 aa12.9□□□□□ -0.34
TOP3A-220ENST00000585031 ARV1Q9H2C2 271 aa12.9□□□□□ -0.34
TOP3A-220ENST00000585031 ENY2Q9NPA8 101 aa12.9□□□□□ -0.34
TOP3A-220ENST00000585031 I3L2K1 104 aa12.89□□□□□ -0.35
TOP3A-220ENST00000585031 IFNA5P01569 189 aa12.89□□□□□ -0.35
TOP3A-220ENST00000585031 RELQ04864 619 aaPredicted RBP12.89□□□□□ -0.35
TOP3A-220ENST00000585031 CLINT1Q14677 625 aa12.89□□□□□ -0.35
TOP3A-220ENST00000585031 TOMM20LQ6UXN7 152 aa12.89□□□□□ -0.35
TOP3A-220ENST00000585031 OR1L8Q8NGR8 309 aa12.89□□□□□ -0.35
TOP3A-220ENST00000585031 RNF141Q8WVD5 230 aa12.89□□□□□ -0.35
TOP3A-220ENST00000585031 GINS3Q9BRX5 216 aa12.89□□□□□ -0.35
TOP3A-220ENST00000585031 PFDN2Q9UHV9 154 aa12.89□□□□□ -0.35
TOP3A-220ENST00000585031 CYB5BO43169 146 aa12.88□□□□□ -0.35
TOP3A-220ENST00000585031 NMBP08949 121 aa12.88□□□□□ -0.35
TOP3A-220ENST00000585031 SEC11BP0C7V7 166 aa12.88□□□□□ -0.35
TOP3A-220ENST00000585031 SPP1P10451 314 aa12.88□□□□□ -0.35
TOP3A-220ENST00000585031 HOXA1P49639 335 aaPredicted RBP12.88□□□□□ -0.35
TOP3A-220ENST00000585031 HSPE1P61604 102 aaKnown RBP12.88□□□□□ -0.35
TOP3A-220ENST00000585031 ATP6V1FQ16864 119 aa12.88□□□□□ -0.35
TOP3A-220ENST00000585031 MORN3Q6PF18 240 aaPredicted RBP12.88□□□□□ -0.35
TOP3A-220ENST00000585031 TMEM14EPQ6UXP3 125 aa12.88□□□□□ -0.35
TOP3A-220ENST00000585031 UBE2DNLQ8IWF7 75 aa12.88□□□□□ -0.35
TOP3A-220ENST00000585031 TMED6Q8WW62 240 aa12.88□□□□□ -0.35
TOP3A-220ENST00000585031 WFDC1Q9HC57 220 aa12.88□□□□□ -0.35
TOP3A-220ENST00000585031 TMEM14BQ9NUH8 114 aa12.88□□□□□ -0.35
TOP3A-220ENST00000585031 TRAV2A0A0B4J234 112 aa12.87□□□□□ -0.35
TOP3A-220ENST00000585031 K7EQG2 157 aa12.87□□□□□ -0.35
TOP3A-220ENST00000585031 METTL15P1P0C7V9 234 aa12.87□□□□□ -0.35
TOP3A-220ENST00000585031 TMEM41BQ5BJD5 291 aa12.87□□□□□ -0.35
TOP3A-220ENST00000585031 FAM74A1Q5RGS3 127 aa12.87□□□□□ -0.35
TOP3A-220ENST00000585031 HSD17B13Q7Z5P4 300 aaPredicted RBP12.87□□□□□ -0.35
TOP3A-220ENST00000585031 PINX1Q96BK5 328 aaKnown RBP12.87□□□□□ -0.35
TOP3A-220ENST00000585031 GNPNAT1Q96EK6 184 aaPredicted RBP12.87□□□□□ -0.35
TOP3A-220ENST00000585031 ZFAND3Q9H8U3 227 aa12.87□□□□□ -0.35
TOP3A-220ENST00000585031 HEYLQ9NQ87 328 aaPredicted RBP12.87□□□□□ -0.35
TOP3A-220ENST00000585031 MED9Q9NWA0 146 aa12.87□□□□□ -0.35
TOP3A-220ENST00000585031 RABAC1Q9UI14 185 aa12.87□□□□□ -0.35
TOP3A-220ENST00000585031 OR51B2Q9Y5P1 312 aa12.87□□□□□ -0.35
TOP3A-220ENST00000585031 RPL11P62913 178 aaKnown RBP12.86□□□□□ -0.35
TOP3A-220ENST00000585031 SLC38A11Q08AI6 406 aa12.86□□□□□ -0.35
TOP3A-220ENST00000585031 SCGB1C1Q8TD33 95 aa12.86□□□□□ -0.35
TOP3A-220ENST00000585031 ZNF688P0C7X2 276 aa12.85□□□□□ -0.35
TOP3A-220ENST00000585031 SULT1A2P50226 295 aa12.85□□□□□ -0.35
TOP3A-220ENST00000585031 RAB5CP51148 216 aa12.85□□□□□ -0.35
TOP3A-220ENST00000585031 MFAP4P55083 255 aa12.85□□□□□ -0.35
TOP3A-220ENST00000585031 ATP5IP56385 69 aaPredicted RBP12.85□□□□□ -0.35
TOP3A-220ENST00000585031 RAB11AP62491 216 aa12.85□□□□□ -0.35
TOP3A-220ENST00000585031 BLOC1S1P78537 153 aa12.85□□□□□ -0.35
TOP3A-220ENST00000585031 RNF212Q495C1 297 aa12.85□□□□□ -0.35
TOP3A-220ENST00000585031 ACTL10Q5JWF8 245 aa12.85□□□□□ -0.35
TOP3A-220ENST00000585031 COMMD7Q86VX2 200 aa12.85□□□□□ -0.35
TOP3A-220ENST00000585031 OR10P1Q8NGE3 313 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms