RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-231ENST00000584063 IGSF10Q6WRI0 2623 aa9.36□□□□□ -0.91
CDK5RAP3-231ENST00000584063 THBDP07204 575 aa9.36□□□□□ -0.91
CDK5RAP3-231ENST00000584063 APELAP0DMC3 54 aa9.36□□□□□ -0.91
CDK5RAP3-231ENST00000584063 PRB3Q04118 309 aaPredicted RBP9.36□□□□□ -0.91
CDK5RAP3-231ENST00000584063 KCNIP2Q9NS61 270 aa9.36□□□□□ -0.91
CDK5RAP3-231ENST00000584063 BET1LQ9NYM9 111 aa9.36□□□□□ -0.91
CDK5RAP3-231ENST00000584063 FAM208BQ5VWN6 2430 aa9.36□□□□□ -0.91
CDK5RAP3-231ENST00000584063 TRAV5A0A0B4J249 113 aa9.36□□□□□ -0.91
CDK5RAP3-231ENST00000584063 CCL21O00585 134 aa9.36□□□□□ -0.91
CDK5RAP3-231ENST00000584063 CCL8P80075 99 aa9.36□□□□□ -0.91
CDK5RAP3-231ENST00000584063 PIGBOS1A0A0B4J2F0 54 aa9.35□□□□□ -0.91
CDK5RAP3-231ENST00000584063 GAGE12JA6NER3 117 aa9.35□□□□□ -0.91
CDK5RAP3-231ENST00000584063 GAGE7O76087 117 aa9.35□□□□□ -0.91
CDK5RAP3-231ENST00000584063 PLAUP00749 431 aa9.35□□□□□ -0.91
CDK5RAP3-231ENST00000584063 GAGE12FP0CL80 117 aa9.35□□□□□ -0.91
CDK5RAP3-231ENST00000584063 GAGE12GP0CL81 117 aa9.35□□□□□ -0.91
CDK5RAP3-231ENST00000584063 GAGE12IP0CL82 117 aa9.35□□□□□ -0.91
CDK5RAP3-231ENST00000584063 CD40P25942 277 aa9.35□□□□□ -0.91
CDK5RAP3-231ENST00000584063 OR10J1P30954 320 aa9.35□□□□□ -0.91
CDK5RAP3-231ENST00000584063 GAGE4Q13068 117 aa9.35□□□□□ -0.91
CDK5RAP3-231ENST00000584063 LINC00336Q6ZUF6 198 aa9.35□□□□□ -0.91
CDK5RAP3-231ENST00000584063 WNT10AQ9GZT5 417 aa9.35□□□□□ -0.91
CDK5RAP3-231ENST00000584063 NAT8BQ9UHF3 227 aa9.35□□□□□ -0.91
CDK5RAP3-231ENST00000584063 CXorf1O96002 111 aa9.35□□□□□ -0.91
CDK5RAP3-231ENST00000584063 IGKV1-16P04430 117 aa9.35□□□□□ -0.91
CDK5RAP3-231ENST00000584063 SMIM17P0DL12 118 aa9.35□□□□□ -0.91
CDK5RAP3-231ENST00000584063 VDAC2P45880 294 aaPredicted RBP9.35□□□□□ -0.91
CDK5RAP3-231ENST00000584063 HINT1P49773 126 aaPredicted RBP9.35□□□□□ -0.91
CDK5RAP3-231ENST00000584063 BSPH1Q075Z2 132 aa9.35□□□□□ -0.91
CDK5RAP3-231ENST00000584063 MORN5Q5VZ52 161 aa9.35□□□□□ -0.91
CDK5RAP3-231ENST00000584063 MMD2Q8IY49 270 aa9.35□□□□□ -0.91
CDK5RAP3-231ENST00000584063 IFI27L2Q9H2X8 130 aa9.35□□□□□ -0.91
CDK5RAP3-231ENST00000584063 TMEM106BQ9NUM4 274 aa9.35□□□□□ -0.91
CDK5RAP3-231ENST00000584063 LOXL3P58215 753 aa9.35□□□□□ -0.91
CDK5RAP3-231ENST00000584063 TAL2Q16559 108 aa9.35□□□□□ -0.91
CDK5RAP3-231ENST00000584063 CENPWQ5EE01 88 aa9.35□□□□□ -0.91
CDK5RAP3-231ENST00000584063 FAM216BQ8N7L0 139 aa9.35□□□□□ -0.91
CDK5RAP3-231ENST00000584063 OR4C13Q8NGP0 309 aa9.35□□□□□ -0.91
CDK5RAP3-231ENST00000584063 LINC01560Q8TB33 94 aa9.35□□□□□ -0.91
CDK5RAP3-231ENST00000584063 IGKV1OR2-108A0A075B7D4 117 aa9.34□□□□□ -0.91
CDK5RAP3-231ENST00000584063 SAA2-SAA4A0A096LPE2 208 aa9.34□□□□□ -0.91
CDK5RAP3-231ENST00000584063 SRRM5B3KS81 715 aa9.34□□□□□ -0.91
CDK5RAP3-231ENST00000584063 SAA2P0DJI9 122 aaPredicted RBP9.34□□□□□ -0.91
CDK5RAP3-231ENST00000584063 CT45A1Q5HYN5 189 aa9.34□□□□□ -0.91
CDK5RAP3-231ENST00000584063 OR9G1Q8NH87 305 aa9.34□□□□□ -0.91
CDK5RAP3-231ENST00000584063 CT45A3Q8NHU0 189 aa9.34□□□□□ -0.91
CDK5RAP3-231ENST00000584063 GNB4Q9HAV0 340 aa9.34□□□□□ -0.91
CDK5RAP3-231ENST00000584063 PRSS46E5RG02 174 aa9.34□□□□□ -0.91
CDK5RAP3-231ENST00000584063 CD24P25063 80 aa9.34□□□□□ -0.91
CDK5RAP3-231ENST00000584063 OPRK1P41145 380 aa9.34□□□□□ -0.91
CDK5RAP3-231ENST00000584063 EMP1P54849 157 aa9.34□□□□□ -0.91
CDK5RAP3-231ENST00000584063 KLRB1Q12918 225 aa9.34□□□□□ -0.91
CDK5RAP3-231ENST00000584063 TEPPQ6URK8 271 aa9.34□□□□□ -0.91
CDK5RAP3-231ENST00000584063 NEGR1Q7Z3B1 354 aa9.34□□□□□ -0.91
CDK5RAP3-231ENST00000584063 FAM90A1Q86YD7 464 aa9.34□□□□□ -0.91
CDK5RAP3-231ENST00000584063 FAM168AQ92567 244 aa9.34□□□□□ -0.91
CDK5RAP3-231ENST00000584063 CCL13Q99616 98 aa9.34□□□□□ -0.91
CDK5RAP3-231ENST00000584063 TP73-AS1Q9UF72 201 aa9.34□□□□□ -0.91
CDK5RAP3-231ENST00000584063 H3BTX0 84 aa9.33□□□□□ -0.92
CDK5RAP3-231ENST00000584063 C8orf88P0DMB2 117 aa9.33□□□□□ -0.92
CDK5RAP3-231ENST00000584063 CRYBG3Q68DQ2 2970 aa9.33□□□□□ -0.92
CDK5RAP3-231ENST00000584063 NEUROG1Q92886 237 aa9.33□□□□□ -0.92
CDK5RAP3-231ENST00000584063 SPATA25Q9BR10 227 aa9.33□□□□□ -0.92
CDK5RAP3-231ENST00000584063 NPVFQ9HCQ7 196 aa9.33□□□□□ -0.92
CDK5RAP3-231ENST00000584063 DPRXA6NFQ7 191 aa9.33□□□□□ -0.92
CDK5RAP3-231ENST00000584063 SRRM4A7MD48 611 aaKnown RBP9.33□□□□□ -0.92
CDK5RAP3-231ENST00000584063 C17orf58Q2M2W7 97 aa9.33□□□□□ -0.92
CDK5RAP3-231ENST00000584063 ANXA2RQ3ZCQ2 193 aa9.33□□□□□ -0.92
CDK5RAP3-231ENST00000584063 ZNF439Q8NDP4 499 aa9.33□□□□□ -0.92
CDK5RAP3-231ENST00000584063 OR5AU1Q8NGC0 362 aa9.33□□□□□ -0.92
CDK5RAP3-231ENST00000584063 RASL11BQ9BPW5 248 aa9.33□□□□□ -0.92
CDK5RAP3-231ENST00000584063 CALYQ9NYX4 217 aa9.33□□□□□ -0.92
CDK5RAP3-231ENST00000584063 IGHV3-21A0A0B4J1V1 117 aa9.32□□□□□ -0.92
CDK5RAP3-231ENST00000584063 GNG4P50150 75 aa9.32□□□□□ -0.92
CDK5RAP3-231ENST00000584063 TPPP2P59282 170 aa9.32□□□□□ -0.92
CDK5RAP3-231ENST00000584063 LCN12Q6JVE5 192 aa9.32□□□□□ -0.92
CDK5RAP3-231ENST00000584063 IL36BQ9NZH7 164 aa9.32□□□□□ -0.92
CDK5RAP3-231ENST00000584063 UTP20O75691 2785 aaKnown RBP9.32□□□□□ -0.92
CDK5RAP3-231ENST00000584063 CD3EP07766 207 aa9.32□□□□□ -0.92
CDK5RAP3-231ENST00000584063 DLX1P56177 255 aa9.32□□□□□ -0.92
CDK5RAP3-231ENST00000584063 OR2T6Q8NHC8 308 aa9.32□□□□□ -0.92
CDK5RAP3-231ENST00000584063 NABP2Q9BQ15 211 aa9.32□□□□□ -0.92
CDK5RAP3-231ENST00000584063 PLEKHA3Q9HB20 300 aa9.32□□□□□ -0.92
CDK5RAP3-231ENST00000584063 A0A087X0K7 114 aa9.31□□□□□ -0.92
CDK5RAP3-231ENST00000584063 CCDC179H3BU77 68 aa9.31□□□□□ -0.92
CDK5RAP3-231ENST00000584063 CT45A6P0DMU7 189 aa9.31□□□□□ -0.92
CDK5RAP3-231ENST00000584063 CT45A5P0DMU8 189 aa9.31□□□□□ -0.92
CDK5RAP3-231ENST00000584063 CT45A7P0DMV0 189 aa9.31□□□□□ -0.92
CDK5RAP3-231ENST00000584063 PYYP10082 97 aa9.31□□□□□ -0.92
CDK5RAP3-231ENST00000584063 SRIP30626 198 aa9.31□□□□□ -0.92
CDK5RAP3-231ENST00000584063 MEF2CQ06413 473 aaPredicted RBP9.31□□□□□ -0.92
CDK5RAP3-231ENST00000584063 CDSNQ15517 529 aa9.31□□□□□ -0.92
CDK5RAP3-231ENST00000584063 C10orf55Q5SWW7 151 aa9.31□□□□□ -0.92
CDK5RAP3-231ENST00000584063 ADTRPQ96IZ2 230 aa9.31□□□□□ -0.92
CDK5RAP3-231ENST00000584063 VAMP8Q9BV40 100 aa9.31□□□□□ -0.92
CDK5RAP3-231ENST00000584063 PRO0628Q9UI54 55 aa9.31□□□□□ -0.92
CDK5RAP3-231ENST00000584063 LRRK2Q5S007 2527 aa9.31□□□□□ -0.92
CDK5RAP3-231ENST00000584063 OR2T8A6NH00 312 aa9.31□□□□□ -0.92
CDK5RAP3-231ENST00000584063 E7EUB6 86 aa9.31□□□□□ -0.92
CDK5RAP3-231ENST00000584063 J3QR06 171 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms