RNA–Protein interactions for RNA: ENST00000584014.5

ERBB2-216, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-216ENST00000584014 EIF2B2P49770 351 aaKnown RBP6.31□□□□□ -1.4
ERBB2-216ENST00000584014 BEAN1Q3B7T3 259 aa6.31□□□□□ -1.4
ERBB2-216ENST00000584014 TMEM41BQ5BJD5 291 aa6.31□□□□□ -1.4
ERBB2-216ENST00000584014 MIC13Q5XKP0 118 aa6.31□□□□□ -1.4
ERBB2-216ENST00000584014 Q6ZRG5 221 aa6.31□□□□□ -1.4
ERBB2-216ENST00000584014 TMEM61Q8N0U2 210 aa6.31□□□□□ -1.4
ERBB2-216ENST00000584014 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.31□□□□□ -1.4
ERBB2-216ENST00000584014 STXBP6Q8NFX7 210 aa6.31□□□□□ -1.4
ERBB2-216ENST00000584014 ZNF414Q96IQ9 312 aa6.31□□□□□ -1.4
ERBB2-216ENST00000584014 ATP5SQ99766 215 aa6.31□□□□□ -1.4
ERBB2-216ENST00000584014 TECRQ9NZ01 308 aaKnown RBP6.31□□□□□ -1.4
ERBB2-216ENST00000584014 FBXL17Q9UF56 701 aa6.31□□□□□ -1.4
ERBB2-216ENST00000584014 NOTCH3Q9UM47 2321 aa6.31□□□□□ -1.4
ERBB2-216ENST00000584014 WI2-2373I1.2A0A1W2PRP0 233 aa6.3□□□□□ -1.4
ERBB2-216ENST00000584014 FNDC10F2Z333 226 aa6.3□□□□□ -1.4
ERBB2-216ENST00000584014 CFDP00746 253 aaPredicted RBP6.3□□□□□ -1.4
ERBB2-216ENST00000584014 C8orf88P0DMB2 117 aa6.3□□□□□ -1.4
ERBB2-216ENST00000584014 LYL1P12980 280 aa6.3□□□□□ -1.4
ERBB2-216ENST00000584014 CD81P60033 236 aa6.3□□□□□ -1.4
ERBB2-216ENST00000584014 SELENOTP62341 195 aa6.3□□□□□ -1.4
ERBB2-216ENST00000584014 PAFAH1B2P68402 229 aa6.3□□□□□ -1.4
ERBB2-216ENST00000584014 LINC01559Q495D7 138 aa6.3□□□□□ -1.4
ERBB2-216ENST00000584014 LEMD1Q68G75 181 aa6.3□□□□□ -1.4
ERBB2-216ENST00000584014 DGAT2L7PQ6IED9 249 aa6.3□□□□□ -1.4
ERBB2-216ENST00000584014 GTSCR1Q86UQ5 136 aa6.3□□□□□ -1.4
ERBB2-216ENST00000584014 OR8I2Q8N0Y5 310 aa6.3□□□□□ -1.4
ERBB2-216ENST00000584014 STPG3Q8N7X2 389 aa6.3□□□□□ -1.4
ERBB2-216ENST00000584014 UHRF2Q96PU4 802 aa6.3□□□□□ -1.4
ERBB2-216ENST00000584014 GGTLC1Q9BX51 225 aa6.3□□□□□ -1.4
ERBB2-216ENST00000584014 MFFQ9GZY8 342 aa6.3□□□□□ -1.4
ERBB2-216ENST00000584014 WFDC1Q9HC57 220 aa6.3□□□□□ -1.4
ERBB2-216ENST00000584014 AURKAIP1Q9NWT8 199 aaPredicted RBP6.3□□□□□ -1.4
ERBB2-216ENST00000584014 UBQLN2Q9UHD9 624 aa6.3□□□□□ -1.4
ERBB2-216ENST00000584014 SLC45A2Q9UMX9 530 aa6.3□□□□□ -1.4
ERBB2-216ENST00000584014 HIGD1AQ9Y241 93 aa6.3□□□□□ -1.4
ERBB2-216ENST00000584014 WDR83OSQ9Y284 106 aa6.3□□□□□ -1.4
ERBB2-216ENST00000584014 PXMP4Q9Y6I8 212 aa6.3□□□□□ -1.4
ERBB2-216ENST00000584014 MGAM2Q2M2H8 2515 aa6.3□□□□□ -1.4
ERBB2-216ENST00000584014 PCP4L1A6NKN8 68 aa6.29□□□□□ -1.4
ERBB2-216ENST00000584014 ZNF785A8K8V0 405 aa6.29□□□□□ -1.4
ERBB2-216ENST00000584014 C17orf112F2Z3M2 114 aa6.29□□□□□ -1.4
ERBB2-216ENST00000584014 ZNF561-AS1K7EIQ3 104 aa6.29□□□□□ -1.4
ERBB2-216ENST00000584014 SNRPCP09234 159 aaKnown RBP6.29□□□□□ -1.4
ERBB2-216ENST00000584014 CRYBB3P26998 211 aa6.29□□□□□ -1.4
ERBB2-216ENST00000584014 SLAQ13239 276 aa6.29□□□□□ -1.4
ERBB2-216ENST00000584014 VWC2Q2TAL6 325 aa6.29□□□□□ -1.4
ERBB2-216ENST00000584014 HSD17B11Q8NBQ5 300 aa6.29□□□□□ -1.4
ERBB2-216ENST00000584014 MRAPQ8TCY5 172 aa6.29□□□□□ -1.4
ERBB2-216ENST00000584014 AQP10Q96PS8 301 aa6.29□□□□□ -1.4
ERBB2-216ENST00000584014 RSG1Q9BU20 258 aa6.29□□□□□ -1.4
ERBB2-216ENST00000584014 SCRT1Q9BWW7 348 aa6.29□□□□□ -1.4
ERBB2-216ENST00000584014 NPCDR1Q9BY65 106 aa6.29□□□□□ -1.4
ERBB2-216ENST00000584014 WDR61Q9GZS3 305 aaKnown RBP6.29□□□□□ -1.4
ERBB2-216ENST00000584014 ARV1Q9H2C2 271 aa6.29□□□□□ -1.4
ERBB2-216ENST00000584014 SLC39A9Q9NUM3 307 aa6.29□□□□□ -1.4
ERBB2-216ENST00000584014 PGPEP1Q9NXJ5 209 aa6.29□□□□□ -1.4
ERBB2-216ENST00000584014 SIGLEC8Q9NYZ4 499 aa6.29□□□□□ -1.4
ERBB2-216ENST00000584014 TNFSF18Q9UNG2 199 aa6.29□□□□□ -1.4
ERBB2-216ENST00000584014 RFNGQ9Y644 331 aa6.29□□□□□ -1.4
ERBB2-216ENST00000584014 BORCS7-ASMTA0A0B4J1R7 106 aa6.28□□□□□ -1.4
ERBB2-216ENST00000584014 ZNF98A6NK75 572 aa6.28□□□□□ -1.4
ERBB2-216ENST00000584014 G3V3Q6 166 aa6.28□□□□□ -1.4
ERBB2-216ENST00000584014 PFDN1O60925 122 aa6.28□□□□□ -1.4
ERBB2-216ENST00000584014 MPDU1O75352 247 aa6.28□□□□□ -1.4
ERBB2-216ENST00000584014 CD7P09564 240 aa6.28□□□□□ -1.4
ERBB2-216ENST00000584014 S100A7P31151 101 aa6.28□□□□□ -1.4
ERBB2-216ENST00000584014 EGFEM1PQ0D2K5 195 aa6.28□□□□□ -1.4
ERBB2-216ENST00000584014 OPCMLQ14982 345 aa6.28□□□□□ -1.4
ERBB2-216ENST00000584014 FFAR4Q5NUL3 377 aa6.28□□□□□ -1.4
ERBB2-216ENST00000584014 C10orf113Q5VZT2 155 aa6.28□□□□□ -1.4
ERBB2-216ENST00000584014 SIGLEC15Q6ZMC9 328 aa6.28□□□□□ -1.4
ERBB2-216ENST00000584014 LINC00305Q7Z4B0 112 aa6.28□□□□□ -1.4
ERBB2-216ENST00000584014 OR11H4Q8NGC9 324 aa6.28□□□□□ -1.4
ERBB2-216ENST00000584014 OR2K2Q8NGT1 345 aa6.28□□□□□ -1.4
ERBB2-216ENST00000584014 ST6GAL2Q96JF0 529 aa6.28□□□□□ -1.4
ERBB2-216ENST00000584014 NEURL2Q9BR09 285 aa6.28□□□□□ -1.4
ERBB2-216ENST00000584014 SLC25A39Q9BZJ4 359 aaPredicted RBP6.28□□□□□ -1.4
ERBB2-216ENST00000584014 MS4A6AQ9H2W1 248 aa6.28□□□□□ -1.4
ERBB2-216ENST00000584014 VSIRQ9H7M9 311 aa6.28□□□□□ -1.4
ERBB2-216ENST00000584014 TUBA4BQ9H853 241 aa6.28□□□□□ -1.4
ERBB2-216ENST00000584014 DNAJC4Q9NNZ3 241 aa6.28□□□□□ -1.4
ERBB2-216ENST00000584014 LSM4Q9Y4Z0 139 aaKnown RBP6.28□□□□□ -1.4
ERBB2-216ENST00000584014 NOTCH1P46531 2555 aa6.28□□□□□ -1.4
ERBB2-216ENST00000584014 CMYA5Q8N3K9 4069 aa6.27□□□□□ -1.41
ERBB2-216ENST00000584014 TRAV5A0A0B4J249 113 aa6.27□□□□□ -1.41
ERBB2-216ENST00000584014 TRAV25A0A0B4J276 109 aa6.27□□□□□ -1.41
ERBB2-216ENST00000584014 KANTRA0A1W2PQU2 76 aa6.27□□□□□ -1.41
ERBB2-216ENST00000584014 RNF222A6NCQ9 220 aa6.27□□□□□ -1.41
ERBB2-216ENST00000584014 OR4C46A6NHA9 309 aa6.27□□□□□ -1.41
ERBB2-216ENST00000584014 CBY3A6NI87 242 aa6.27□□□□□ -1.41
ERBB2-216ENST00000584014 BUB3O43684 328 aa6.27□□□□□ -1.41
ERBB2-216ENST00000584014 RPL29P47914 159 aaKnown RBP6.27□□□□□ -1.41
ERBB2-216ENST00000584014 CD300CQ08708 224 aa6.27□□□□□ -1.41
ERBB2-216ENST00000584014 ZNF266Q14584 549 aa6.27□□□□□ -1.41
ERBB2-216ENST00000584014 GCSAMLQ5JQS6 135 aa6.27□□□□□ -1.41
ERBB2-216ENST00000584014 FAM78BQ5VT40 261 aa6.27□□□□□ -1.41
ERBB2-216ENST00000584014 RPL7L1Q6DKI1 246 aaKnown RBP6.27□□□□□ -1.41
ERBB2-216ENST00000584014 PATE2Q6UY27 113 aa6.27□□□□□ -1.41
ERBB2-216ENST00000584014 S100A7AQ86SG5 101 aa6.27□□□□□ -1.41
ERBB2-216ENST00000584014 OR1L4Q8NGR5 311 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms