RNA–Protein interactions for RNA: ENST00000583965.5

CDRT1-207, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDRT1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-207ENST00000583965 BUB3O43684 328 aa8.84□□□□□ -0.99
CDRT1-207ENST00000583965 SAP30O75446 220 aa8.84□□□□□ -0.99
CDRT1-207ENST00000583965 HBE1P02100 147 aa8.84□□□□□ -0.99
CDRT1-207ENST00000583965 FHITP49789 147 aa8.84□□□□□ -0.99
CDRT1-207ENST00000583965 UQCC3Q6UW78 93 aa8.84□□□□□ -0.99
CDRT1-207ENST00000583965 ADAMTSL5Q6ZMM2 481 aa8.84□□□□□ -0.99
CDRT1-207ENST00000583965 LINC00305Q7Z4B0 112 aa8.84□□□□□ -0.99
CDRT1-207ENST00000583965 OR2K2Q8NGT1 345 aa8.84□□□□□ -0.99
CDRT1-207ENST00000583965 DYNLRB2Q8TF09 96 aa8.84□□□□□ -0.99
CDRT1-207ENST00000583965 SHANK2-AS3Q9BTD1 123 aa8.84□□□□□ -0.99
CDRT1-207ENST00000583965 RHPN1-AS1Q9BWJ2 59 aa8.84□□□□□ -0.99
CDRT1-207ENST00000583965 MRPL32Q9BYC8 188 aaKnown RBP8.84□□□□□ -0.99
CDRT1-207ENST00000583965 WIPF1O43516 503 aa8.83□□□□□ -1
CDRT1-207ENST00000583965 APOHP02749 345 aaPredicted RBP8.83□□□□□ -1
CDRT1-207ENST00000583965 H2AFB1P0C5Y9 115 aa8.83□□□□□ -1
CDRT1-207ENST00000583965 RHOBP62745 196 aa8.83□□□□□ -1
CDRT1-207ENST00000583965 PMS2P11Q13670 270 aa8.83□□□□□ -1
CDRT1-207ENST00000583965 FAM78BQ5VT40 261 aa8.83□□□□□ -1
CDRT1-207ENST00000583965 C16orf54Q6UWD8 224 aa8.83□□□□□ -1
CDRT1-207ENST00000583965 GPR82Q96P67 336 aa8.83□□□□□ -1
CDRT1-207ENST00000583965 UHRF2Q96PU4 802 aa8.83□□□□□ -1
CDRT1-207ENST00000583965 HRH4Q9H3N8 390 aa8.83□□□□□ -1
CDRT1-207ENST00000583965 MLXQ9UH92 298 aa8.83□□□□□ -1
CDRT1-207ENST00000583965 CMYA5Q8N3K9 4069 aa8.83□□□□□ -1
CDRT1-207ENST00000583965 IGHV3-49A0A0A0MS15 119 aa8.82□□□□□ -1
CDRT1-207ENST00000583965 CTXND1A0A1B0GTU2 59 aa8.82□□□□□ -1
CDRT1-207ENST00000583965 A0A1W2PPV4 95 aa8.82□□□□□ -1
CDRT1-207ENST00000583965 HELTA6NFD8 242 aa8.82□□□□□ -1
CDRT1-207ENST00000583965 TEX46H3BTG2 121 aa8.82□□□□□ -1
CDRT1-207ENST00000583965 IGLV1-51P01701 117 aa8.82□□□□□ -1
CDRT1-207ENST00000583965 EDN2P20800 178 aa8.82□□□□□ -1
CDRT1-207ENST00000583965 RAB2AP61019 212 aa8.82□□□□□ -1
CDRT1-207ENST00000583965 ZNF726P1Q15940 193 aa8.82□□□□□ -1
CDRT1-207ENST00000583965 DEFB114Q30KQ6 69 aa8.82□□□□□ -1
CDRT1-207ENST00000583965 GCSAMLQ5JQS6 135 aa8.82□□□□□ -1
CDRT1-207ENST00000583965 OR8I2Q8N0Y5 310 aa8.82□□□□□ -1
CDRT1-207ENST00000583965 RPP25LQ8N5L8 163 aaKnown RBP8.82□□□□□ -1
CDRT1-207ENST00000583965 OR10G4Q8NGN3 311 aa8.82□□□□□ -1
CDRT1-207ENST00000583965 OR10G9Q8NGN4 311 aa8.82□□□□□ -1
CDRT1-207ENST00000583965 OR10G7Q8NGN6 311 aa8.82□□□□□ -1
CDRT1-207ENST00000583965 GLMPQ8WWB7 406 aa8.82□□□□□ -1
CDRT1-207ENST00000583965 ACTR3CQ9C0K3 210 aaPredicted RBP8.82□□□□□ -1
CDRT1-207ENST00000583965 FUT9Q9Y231 359 aa8.82□□□□□ -1
CDRT1-207ENST00000583965 IGHV3OR16-13A0A075B7E8 117 aa8.81□□□□□ -1
CDRT1-207ENST00000583965 IGHV3-74A0A0B4J1X5 117 aa8.81□□□□□ -1
CDRT1-207ENST00000583965 TRAV25A0A0B4J276 109 aa8.81□□□□□ -1
CDRT1-207ENST00000583965 RPL7P18124 248 aaKnown RBP8.81□□□□□ -1
CDRT1-207ENST00000583965 TAS2R45P59539 299 aa8.81□□□□□ -1
CDRT1-207ENST00000583965 BPIFA4PQ86YQ2 179 aa8.81□□□□□ -1
CDRT1-207ENST00000583965 STXBP6Q8NFX7 210 aa8.81□□□□□ -1
CDRT1-207ENST00000583965 CITED4Q96RK1 184 aa8.81□□□□□ -1
CDRT1-207ENST00000583965 SCRT1Q9BWW7 348 aa8.81□□□□□ -1
CDRT1-207ENST00000583965 SMDT1Q9H4I9 107 aa8.81□□□□□ -1
CDRT1-207ENST00000583965 SLC25A22Q9H936 323 aa8.81□□□□□ -1
CDRT1-207ENST00000583965 SEPSECSQ9HD40 501 aaKnown RBP8.81□□□□□ -1
CDRT1-207ENST00000583965 IGHV3-66A0A0C4DH42 116 aa8.8□□□□□ -1
CDRT1-207ENST00000583965 MAP1LC3B2A6NCE7 125 aa8.8□□□□□ -1
CDRT1-207ENST00000583965 NDUFS6O75380 124 aaKnown RBP8.8□□□□□ -1
CDRT1-207ENST00000583965 IGLL1P15814 213 aa8.8□□□□□ -1
CDRT1-207ENST00000583965 GALR1P47211 349 aa8.8□□□□□ -1
CDRT1-207ENST00000583965 CDC34P49427 236 aaPredicted RBP8.8□□□□□ -1
CDRT1-207ENST00000583965 KHDC3LQ587J8 217 aa8.8□□□□□ -1
CDRT1-207ENST00000583965 MORN5Q5VZ52 161 aa8.8□□□□□ -1
CDRT1-207ENST00000583965 FAM90A2PQ658T7 463 aa8.8□□□□□ -1
CDRT1-207ENST00000583965 LEMD1Q68G75 181 aa8.8□□□□□ -1
CDRT1-207ENST00000583965 LCN12Q6JVE5 192 aa8.8□□□□□ -1
CDRT1-207ENST00000583965 FAM122CQ6P4D5 195 aa8.8□□□□□ -1
CDRT1-207ENST00000583965 SIGLEC15Q6ZMC9 328 aa8.8□□□□□ -1
CDRT1-207ENST00000583965 TCF24Q7RTU0 167 aa8.8□□□□□ -1
CDRT1-207ENST00000583965 SFT2D1Q8WV19 159 aa8.8□□□□□ -1
CDRT1-207ENST00000583965 FAM210AQ96ND0 272 aa8.8□□□□□ -1
CDRT1-207ENST00000583965 MAP1LC3BQ9GZQ8 125 aa8.8□□□□□ -1
CDRT1-207ENST00000583965 TSPAN4O14817 238 aa8.79□□□□□ -1
CDRT1-207ENST00000583965 MEOX2P50222 304 aa8.79□□□□□ -1
CDRT1-207ENST00000583965 PAFAH1B2P68402 229 aa8.79□□□□□ -1
CDRT1-207ENST00000583965 CD300EQ496F6 205 aaPredicted RBP8.79□□□□□ -1
CDRT1-207ENST00000583965 PQLC2Q6ZP29 291 aa8.79□□□□□ -1
CDRT1-207ENST00000583965 RBPMS2Q6ZRY4 209 aaKnown RBP8.79□□□□□ -1
CDRT1-207ENST00000583965 MIR17HGQ75NE6 70 aa8.79□□□□□ -1
CDRT1-207ENST00000583965 SSX7Q7RTT5 188 aa8.79□□□□□ -1
CDRT1-207ENST00000583965 RAB24Q969Q5 203 aa8.79□□□□□ -1
CDRT1-207ENST00000583965 TMEM14CQ9P0S9 112 aa8.79□□□□□ -1
CDRT1-207ENST00000583965 ZMAT5Q9UDW3 170 aaKnown RBP8.79□□□□□ -1
CDRT1-207ENST00000583965 MGAM2Q2M2H8 2515 aa8.79□□□□□ -1
CDRT1-207ENST00000583965 NBEAL1Q6ZS30 2694 aa8.78□□□□□ -1
CDRT1-207ENST00000583965 A0A087X0K7 114 aa8.78□□□□□ -1
CDRT1-207ENST00000583965 TRAV2A0A0B4J234 112 aa8.78□□□□□ -1
CDRT1-207ENST00000583965 TRAV5A0A0B4J249 113 aa8.78□□□□□ -1
CDRT1-207ENST00000583965 KRBOX1C9JBD0 128 aa8.78□□□□□ -1
CDRT1-207ENST00000583965 ATF4P18848 351 aaPredicted RBP8.78□□□□□ -1
CDRT1-207ENST00000583965 TAGLN2P37802 199 aaKnown RBP8.78□□□□□ -1
CDRT1-207ENST00000583965 RPL11P62913 178 aaKnown RBP8.78□□□□□ -1
CDRT1-207ENST00000583965 GUK1Q16774 197 aa8.78□□□□□ -1
CDRT1-207ENST00000583965 SAMD13Q5VXD3 122 aa8.78□□□□□ -1
CDRT1-207ENST00000583965 SPATA31B1PQ5VZV4 182 aa8.78□□□□□ -1
CDRT1-207ENST00000583965 TMEM61Q8N0U2 210 aa8.78□□□□□ -1
CDRT1-207ENST00000583965 FAM167A-AS1Q96KT0 104 aa8.78□□□□□ -1
CDRT1-207ENST00000583965 SPAG8Q99932 426 aaPredicted RBP8.78□□□□□ -1
CDRT1-207ENST00000583965 SLC25A2Q9BXI2 301 aa8.78□□□□□ -1
CDRT1-207ENST00000583965 ZNF785A8K8V0 405 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms