RNA–Protein interactions for RNA: ENST00000583800.1

SMCHD1-210, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-210ENST00000583800 GAGE2EQ4V326 116 aa5.52□□□□□ -1.53
SMCHD1-210ENST00000583800 C2orf83Q53S99 150 aa5.52□□□□□ -1.53
SMCHD1-210ENST00000583800 SOHLH1Q5JUK2 328 aa5.52□□□□□ -1.53
SMCHD1-210ENST00000583800 GAGE2AQ6NT46 116 aa5.52□□□□□ -1.53
SMCHD1-210ENST00000583800 ARRDC1Q8N5I2 433 aa5.52□□□□□ -1.53
SMCHD1-210ENST00000583800 ZNF709Q8N972 641 aa5.52□□□□□ -1.53
SMCHD1-210ENST00000583800 CCDC71LQ8N9Z2 235 aa5.52□□□□□ -1.53
SMCHD1-210ENST00000583800 OR51G1Q8NGK1 321 aa5.52□□□□□ -1.53
SMCHD1-210ENST00000583800 OR13C8Q8NGS7 320 aa5.52□□□□□ -1.53
SMCHD1-210ENST00000583800 OR52E5Q8NH55 327 aa5.52□□□□□ -1.53
SMCHD1-210ENST00000583800 MARCH1Q8TCQ1 289 aa5.52□□□□□ -1.53
SMCHD1-210ENST00000583800 RNASEH2CQ8TDP1 164 aaKnown RBP5.52□□□□□ -1.53
SMCHD1-210ENST00000583800 ACY3Q96HD9 319 aa5.52□□□□□ -1.53
SMCHD1-210ENST00000583800 FAM210BQ96KR6 192 aa5.52□□□□□ -1.53
SMCHD1-210ENST00000583800 LINC00052Q96N35 136 aa5.52□□□□□ -1.53
SMCHD1-210ENST00000583800 NIPSNAP3BQ9BS92 247 aa5.52□□□□□ -1.53
SMCHD1-210ENST00000583800 SLC35B3Q9H1N7 401 aa5.52□□□□□ -1.53
SMCHD1-210ENST00000583800 SAV1Q9H4B6 383 aaPredicted RBP5.52□□□□□ -1.53
SMCHD1-210ENST00000583800 GAGE2DQ9UEU5 116 aa5.52□□□□□ -1.53
SMCHD1-210ENST00000583800 CACNG5Q9UF02 275 aa5.52□□□□□ -1.53
SMCHD1-210ENST00000583800 RFNGQ9Y644 331 aa5.52□□□□□ -1.53
SMCHD1-210ENST00000583800 DNAH5Q8TE73 4624 aa5.51□□□□□ -1.53
SMCHD1-210ENST00000583800 SMIM9A6NGZ8 99 aa5.51□□□□□ -1.53
SMCHD1-210ENST00000583800 CEBPZOSA8MTT3 80 aa5.51□□□□□ -1.53
SMCHD1-210ENST00000583800 FAM25AB3EWG3 89 aa5.51□□□□□ -1.53
SMCHD1-210ENST00000583800 FAM25CB3EWG5 89 aa5.51□□□□□ -1.53
SMCHD1-210ENST00000583800 FAM25GB3EWG6 89 aa5.51□□□□□ -1.53
SMCHD1-210ENST00000583800 F6UB75 175 aa5.51□□□□□ -1.53
SMCHD1-210ENST00000583800 GSTZ1O43708 216 aaPredicted RBP5.51□□□□□ -1.53
SMCHD1-210ENST00000583800 PRAF2O60831 178 aa5.51□□□□□ -1.53
SMCHD1-210ENST00000583800 RD3LP0DJH9 198 aa5.51□□□□□ -1.53
SMCHD1-210ENST00000583800 PSG1P11464 419 aa5.51□□□□□ -1.53
SMCHD1-210ENST00000583800 VBP1P61758 197 aa5.51□□□□□ -1.53
SMCHD1-210ENST00000583800 MEF2DQ14814 521 aa5.51□□□□□ -1.53
SMCHD1-210ENST00000583800 RNF212Q495C1 297 aa5.51□□□□□ -1.53
SMCHD1-210ENST00000583800 SCGB2B2Q4G0G5 96 aa5.51□□□□□ -1.53
SMCHD1-210ENST00000583800 C1orf134Q5TEV5 83 aa5.51□□□□□ -1.53
SMCHD1-210ENST00000583800 FAAP20Q6NZ36 180 aa5.51□□□□□ -1.53
SMCHD1-210ENST00000583800 FOXI2Q6ZQN5 318 aa5.51□□□□□ -1.53
SMCHD1-210ENST00000583800 OR4B1Q8NGF8 309 aa5.51□□□□□ -1.53
SMCHD1-210ENST00000583800 OR52I2Q8NH67 350 aa5.51□□□□□ -1.53
SMCHD1-210ENST00000583800 TMEM18Q96B42 140 aa5.51□□□□□ -1.53
SMCHD1-210ENST00000583800 GPR146Q96CH1 333 aa5.51□□□□□ -1.53
SMCHD1-210ENST00000583800 PBDC1Q9BVG4 233 aa5.51□□□□□ -1.53
SMCHD1-210ENST00000583800 TMEM222Q9H0R3 208 aa5.51□□□□□ -1.53
SMCHD1-210ENST00000583800 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.51□□□□□ -1.53
SMCHD1-210ENST00000583800 YTHDF2Q9Y5A9 579 aaKnown RBP5.51□□□□□ -1.53
SMCHD1-210ENST00000583800 TEX48A0A1B0GUV7 120 aa5.5□□□□□ -1.53
SMCHD1-210ENST00000583800 C16orf90A8MZG2 172 aa5.5□□□□□ -1.53
SMCHD1-210ENST00000583800 SOCS3O14543 225 aa5.5□□□□□ -1.53
SMCHD1-210ENST00000583800 CDS2O95674 445 aa5.5□□□□□ -1.53
SMCHD1-210ENST00000583800 HBE1P02100 147 aa5.5□□□□□ -1.53
SMCHD1-210ENST00000583800 RORCP51449 518 aa5.5□□□□□ -1.53
SMCHD1-210ENST00000583800 CNN1P51911 297 aaKnown RBP5.5□□□□□ -1.53
SMCHD1-210ENST00000583800 NMSQ5H8A3 153 aa5.5□□□□□ -1.53
SMCHD1-210ENST00000583800 SELENOHQ8IZQ5 122 aaKnown RBP5.5□□□□□ -1.53
SMCHD1-210ENST00000583800 C1orf158Q8N1D5 194 aa5.5□□□□□ -1.53
SMCHD1-210ENST00000583800 TERB2Q8NHR7 220 aa5.5□□□□□ -1.53
SMCHD1-210ENST00000583800 COQ8AQ8NI60 647 aa5.5□□□□□ -1.53
SMCHD1-210ENST00000583800 ZFAND1Q8TCF1 268 aa5.5□□□□□ -1.53
SMCHD1-210ENST00000583800 GLYATL2Q8WU03 294 aa5.5□□□□□ -1.53
SMCHD1-210ENST00000583800 RBPMSQ93062 196 aaKnown RBP5.5□□□□□ -1.53
SMCHD1-210ENST00000583800 C7orf50Q9BRJ6 194 aaKnown RBP5.5□□□□□ -1.53
SMCHD1-210ENST00000583800 TPPP3Q9BW30 176 aa5.5□□□□□ -1.53
SMCHD1-210ENST00000583800 NAA60Q9H7X0 242 aa5.5□□□□□ -1.53
SMCHD1-210ENST00000583800 MTFP1Q9UDX5 166 aa5.5□□□□□ -1.53
SMCHD1-210ENST00000583800 GOLT1BQ9Y3E0 138 aa5.5□□□□□ -1.53
SMCHD1-210ENST00000583800 TEX13DA0A0J9YY54 714 aaPredicted RBP5.49□□□□□ -1.53
SMCHD1-210ENST00000583800 TNFAIP8O95379 198 aa5.49□□□□□ -1.53
SMCHD1-210ENST00000583800 RAB3DO95716 219 aa5.49□□□□□ -1.53
SMCHD1-210ENST00000583800 TBPP20226 339 aa5.49□□□□□ -1.53
SMCHD1-210ENST00000583800 PSMB3P49720 205 aa5.49□□□□□ -1.53
SMCHD1-210ENST00000583800 TAS2R19P59542 299 aa5.49□□□□□ -1.53
SMCHD1-210ENST00000583800 LYZP61626 148 aa5.49□□□□□ -1.53
SMCHD1-210ENST00000583800 DAD1P61803 113 aa5.49□□□□□ -1.53
SMCHD1-210ENST00000583800 ZNF90Q03938 601 aa5.49□□□□□ -1.53
SMCHD1-210ENST00000583800 OXA1LQ15070 435 aa5.49□□□□□ -1.53
SMCHD1-210ENST00000583800 ZNF79Q15937 498 aa5.49□□□□□ -1.53
SMCHD1-210ENST00000583800 RRN3P1Q2M238 152 aa5.49□□□□□ -1.53
SMCHD1-210ENST00000583800 FAM78BQ5VT40 261 aa5.49□□□□□ -1.53
SMCHD1-210ENST00000583800 MAPKAPK5-AS1Q8N8E1 139 aa5.49□□□□□ -1.53
SMCHD1-210ENST00000583800 RTBDNQ9BSG5 229 aaPredicted RBP5.49□□□□□ -1.53
SMCHD1-210ENST00000583800 FUNDC2Q9BWH2 189 aa5.49□□□□□ -1.53
SMCHD1-210ENST00000583800 VCX3AQ9NNX9 186 aa5.49□□□□□ -1.53
SMCHD1-210ENST00000583800 C14orf166Q9Y224 244 aaKnown RBP5.49□□□□□ -1.53
SMCHD1-210ENST00000583800 IGKV1D-37A0A075B6S9 117 aa5.48□□□□□ -1.53
SMCHD1-210ENST00000583800 A0A087WXM4 84 aa5.48□□□□□ -1.53
SMCHD1-210ENST00000583800 A0A0J9YX75 114 aa5.48□□□□□ -1.53
SMCHD1-210ENST00000583800 ZFP92A6NM28 416 aa5.48□□□□□ -1.53
SMCHD1-210ENST00000583800 CDK2AP2O75956 126 aa5.48□□□□□ -1.53
SMCHD1-210ENST00000583800 PRM2P04554 102 aa5.48□□□□□ -1.53
SMCHD1-210ENST00000583800 NUP62P37198 522 aaPredicted RBP5.48□□□□□ -1.53
SMCHD1-210ENST00000583800 ID1P41134 155 aa5.48□□□□□ -1.53
SMCHD1-210ENST00000583800 PAX9P55771 341 aa5.48□□□□□ -1.53
SMCHD1-210ENST00000583800 SUPT4H1P63272 117 aaKnown RBP5.48□□□□□ -1.53
SMCHD1-210ENST00000583800 PSG9Q00887 426 aa5.48□□□□□ -1.53
SMCHD1-210ENST00000583800 GPR107Q5VW38 600 aa5.48□□□□□ -1.53
SMCHD1-210ENST00000583800 OR8G2PQ6IF36 304 aa5.48□□□□□ -1.53
SMCHD1-210ENST00000583800 STEAP1BQ6NZ63 245 aa5.48□□□□□ -1.53
SMCHD1-210ENST00000583800 EBLN2Q6P2I7 272 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms