RNA–Protein interactions for RNA: ENST00000583527.1

CRLF3-204, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 378 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-204ENST00000583527 ZNF414Q96IQ9 312 aa4.29□□□□□ -1.72
CRLF3-204ENST00000583527 TMEM68Q96MH6 324 aa4.29□□□□□ -1.72
CRLF3-204ENST00000583527 PYGO2Q9BRQ0 406 aa4.29□□□□□ -1.72
CRLF3-204ENST00000583527 CHRDL1Q9BU40 450 aa4.29□□□□□ -1.72
CRLF3-204ENST00000583527 MEGF9Q9H1U4 602 aa4.29□□□□□ -1.72
CRLF3-204ENST00000583527 Q9H3A6 140 aa4.29□□□□□ -1.72
CRLF3-204ENST00000583527 ZFAND3Q9H8U3 227 aa4.29□□□□□ -1.72
CRLF3-204ENST00000583527 ZNF586Q9NXT0 402 aa4.29□□□□□ -1.72
CRLF3-204ENST00000583527 MRPL27Q9P0M9 148 aaKnown RBP4.29□□□□□ -1.72
CRLF3-204ENST00000583527 NSD1Q96L73 2696 aaPredicted RBP4.29□□□□□ -1.72
CRLF3-204ENST00000583527 ZNF469Q96JG9 3925 aaPredicted RBP4.28□□□□□ -1.72
CRLF3-204ENST00000583527 TRAV9-1A0A075B6T8 112 aa4.28□□□□□ -1.72
CRLF3-204ENST00000583527 TRBV9A0A0B4J1U6 114 aa4.28□□□□□ -1.72
CRLF3-204ENST00000583527 TRAV34A0A0B4J273 112 aa4.28□□□□□ -1.72
CRLF3-204ENST00000583527 FAM223BA6NKX1 122 aa4.28□□□□□ -1.72
CRLF3-204ENST00000583527 LINC01548A6NM66 108 aa4.28□□□□□ -1.72
CRLF3-204ENST00000583527 PPP5D1E7EU14 171 aa4.28□□□□□ -1.72
CRLF3-204ENST00000583527 BMPR1BO00238 502 aa4.28□□□□□ -1.72
CRLF3-204ENST00000583527 UBE2CO00762 179 aa4.28□□□□□ -1.72
CRLF3-204ENST00000583527 ISLRO14498 428 aa4.28□□□□□ -1.72
CRLF3-204ENST00000583527 HIST1H2BKO60814 126 aa4.28□□□□□ -1.72
CRLF3-204ENST00000583527 IGLV2-8P01709 118 aa4.28□□□□□ -1.72
CRLF3-204ENST00000583527 TCRAP04437 139 aa4.28□□□□□ -1.72
CRLF3-204ENST00000583527 HIST1H2BJP06899 126 aa4.28□□□□□ -1.72
CRLF3-204ENST00000583527 NBEAP1P0C6P0 100 aa4.28□□□□□ -1.72
CRLF3-204ENST00000583527 IGHV4-31P0DP07 118 aa4.28□□□□□ -1.72
CRLF3-204ENST00000583527 HIST1H1EP10412 219 aaKnown RBP4.28□□□□□ -1.72
CRLF3-204ENST00000583527 MGST1P10620 155 aaKnown RBP4.28□□□□□ -1.72
CRLF3-204ENST00000583527 HIST1H2BOP23527 126 aa4.28□□□□□ -1.72
CRLF3-204ENST00000583527 HIST1H2BBP33778 126 aa4.28□□□□□ -1.72
CRLF3-204ENST00000583527 AKR1D1P51857 326 aa4.28□□□□□ -1.72
CRLF3-204ENST00000583527 FAM3BP58499 235 aaPredicted RBP4.28□□□□□ -1.72
CRLF3-204ENST00000583527 HIST1H2BDP58876 126 aa4.28□□□□□ -1.72
CRLF3-204ENST00000583527 UBE2G1P62253 170 aa4.28□□□□□ -1.72
CRLF3-204ENST00000583527 HIST1H2BCP62807 126 aa4.28□□□□□ -1.72
CRLF3-204ENST00000583527 RANP62826 216 aaKnown RBP4.28□□□□□ -1.72
CRLF3-204ENST00000583527 OR5I1Q13606 314 aa4.28□□□□□ -1.72
CRLF3-204ENST00000583527 HIST2H2BEQ16778 126 aa4.28□□□□□ -1.72
CRLF3-204ENST00000583527 TMEM95Q3KNT9 176 aa4.28□□□□□ -1.72
CRLF3-204ENST00000583527 ACTL10Q5JWF8 245 aa4.28□□□□□ -1.72
CRLF3-204ENST00000583527 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.28□□□□□ -1.72
CRLF3-204ENST00000583527 SIGLEC15Q6ZMC9 328 aa4.28□□□□□ -1.72
CRLF3-204ENST00000583527 S100A7AQ86SG5 101 aa4.28□□□□□ -1.72
CRLF3-204ENST00000583527 BPIFA4PQ86YQ2 179 aa4.28□□□□□ -1.72
CRLF3-204ENST00000583527 FAM223AQ8IWN6 122 aa4.28□□□□□ -1.72
CRLF3-204ENST00000583527 BCL6BQ8N143 479 aaPredicted RBP4.28□□□□□ -1.72
CRLF3-204ENST00000583527 MAPK1IP1LQ8NDC0 245 aa4.28□□□□□ -1.72
CRLF3-204ENST00000583527 OCC1Q8TAD7 63 aa4.28□□□□□ -1.72
CRLF3-204ENST00000583527 HIST1H2BHQ93079 126 aa4.28□□□□□ -1.72
CRLF3-204ENST00000583527 EEF1AKMT3Q96AZ1 226 aa4.28□□□□□ -1.72
CRLF3-204ENST00000583527 IMMP2LQ96T52 175 aa4.28□□□□□ -1.72
CRLF3-204ENST00000583527 TXN2Q99757 166 aa4.28□□□□□ -1.72
CRLF3-204ENST00000583527 HIST1H2BNQ99877 126 aa4.28□□□□□ -1.72
CRLF3-204ENST00000583527 HIST1H2BMQ99879 126 aa4.28□□□□□ -1.72
CRLF3-204ENST00000583527 SRD5A3Q9H8P0 318 aa4.28□□□□□ -1.72
CRLF3-204ENST00000583527 GNB4Q9HAV0 340 aa4.28□□□□□ -1.72
CRLF3-204ENST00000583527 PITPNC1Q9UKF7 332 aa4.28□□□□□ -1.72
CRLF3-204ENST00000583527 V9GYV3 84 aa4.28□□□□□ -1.72
CRLF3-204ENST00000583527 ZFHX3Q15911 3703 aa4.28□□□□□ -1.72
CRLF3-204ENST00000583527 PDZD2O15018 2839 aa4.27□□□□□ -1.73
CRLF3-204ENST00000583527 TRBV19A0A075B6N1 114 aa4.27□□□□□ -1.73
CRLF3-204ENST00000583527 IGHV3OR16-8A0A075B7F1 116 aa4.27□□□□□ -1.73
CRLF3-204ENST00000583527 ZNF320A2RRD8 509 aa4.27□□□□□ -1.73
CRLF3-204ENST00000583527 HELTA6NFD8 242 aa4.27□□□□□ -1.73
CRLF3-204ENST00000583527 ZNF98A6NK75 572 aa4.27□□□□□ -1.73
CRLF3-204ENST00000583527 H3BUA1 57 aa4.27□□□□□ -1.73
CRLF3-204ENST00000583527 J3QKU1 62 aa4.27□□□□□ -1.73
CRLF3-204ENST00000583527 PHOX2AO14813 284 aa4.27□□□□□ -1.73
CRLF3-204ENST00000583527 GCGP01275 180 aa4.27□□□□□ -1.73
CRLF3-204ENST00000583527 IGHV4-59P01825 116 aa4.27□□□□□ -1.73
CRLF3-204ENST00000583527 TRGV3P03979 118 aa4.27□□□□□ -1.73
CRLF3-204ENST00000583527 TRGC2P03986 189 aa4.27□□□□□ -1.73
CRLF3-204ENST00000583527 IGF1P05019 195 aa4.27□□□□□ -1.73
CRLF3-204ENST00000583527 S100A6P06703 90 aa4.27□□□□□ -1.73
CRLF3-204ENST00000583527 CTSGP08311 255 aa4.27□□□□□ -1.73
CRLF3-204ENST00000583527 RPL7P18124 248 aaKnown RBP4.27□□□□□ -1.73
CRLF3-204ENST00000583527 TCL1AP56279 114 aa4.27□□□□□ -1.73
CRLF3-204ENST00000583527 TPPP2P59282 170 aa4.27□□□□□ -1.73
CRLF3-204ENST00000583527 TAS2R60P59551 318 aa4.27□□□□□ -1.73
CRLF3-204ENST00000583527 ERVFC1-1P60608 527 aa4.27□□□□□ -1.73
CRLF3-204ENST00000583527 PDE6HQ13956 83 aa4.27□□□□□ -1.73
CRLF3-204ENST00000583527 TMEM183BQ1AE95 376 aa4.27□□□□□ -1.73
CRLF3-204ENST00000583527 RPEL1Q2QD12 228 aa4.27□□□□□ -1.73
CRLF3-204ENST00000583527 DEFB112Q30KQ8 113 aa4.27□□□□□ -1.73
CRLF3-204ENST00000583527 GOLT1AQ6ZVE7 132 aa4.27□□□□□ -1.73
CRLF3-204ENST00000583527 Q71RC1 249 aaPredicted RBP4.27□□□□□ -1.73
CRLF3-204ENST00000583527 EXOC3-AS1Q8N2X6 119 aa4.27□□□□□ -1.73
CRLF3-204ENST00000583527 CMTM2Q8TAZ6 248 aa4.27□□□□□ -1.73
CRLF3-204ENST00000583527 MBD6Q96DN6 1003 aa4.27□□□□□ -1.73
CRLF3-204ENST00000583527 SMIM12Q96EX1 92 aa4.27□□□□□ -1.73
CRLF3-204ENST00000583527 FMC1Q96HJ9 113 aa4.27□□□□□ -1.73
CRLF3-204ENST00000583527 BTF3L4Q96K17 158 aa4.27□□□□□ -1.73
CRLF3-204ENST00000583527 LINC00479Q96M42 142 aa4.27□□□□□ -1.73
CRLF3-204ENST00000583527 Q96MF0 132 aa4.27□□□□□ -1.73
CRLF3-204ENST00000583527 RNASE7Q9H1E1 156 aaKnown RBP4.27□□□□□ -1.73
CRLF3-204ENST00000583527 OSTCQ9NRP0 149 aa4.27□□□□□ -1.73
CRLF3-204ENST00000583527 GAR1Q9NY12 217 aaKnown RBP4.27□□□□□ -1.73
CRLF3-204ENST00000583527 IL36BQ9NZH7 164 aa4.27□□□□□ -1.73
CRLF3-204ENST00000583527 RABAC1Q9UI14 185 aa4.27□□□□□ -1.73
CRLF3-204ENST00000583527 LINC00527Q9UJ94 153 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms