RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 FAM167A-AS1Q96KT0 104 aa12.41□□□□□ -0.42
CDK5RAP3-228ENST00000583363 SCRT1Q9BWW7 348 aa12.41□□□□□ -0.42
CDK5RAP3-228ENST00000583363 TECRQ9NZ01 308 aaKnown RBP12.41□□□□□ -0.42
CDK5RAP3-228ENST00000583363 UBQLN2Q9UHD9 624 aa12.41□□□□□ -0.42
CDK5RAP3-228ENST00000583363 IGHV3OR16-13A0A075B7E8 117 aa12.4□□□□□ -0.42
CDK5RAP3-228ENST00000583363 IGHV3-74A0A0B4J1X5 117 aa12.4□□□□□ -0.42
CDK5RAP3-228ENST00000583363 IGHV3-66A0A0C4DH42 116 aa12.4□□□□□ -0.42
CDK5RAP3-228ENST00000583363 CTXND1A0A1B0GTU2 59 aa12.4□□□□□ -0.42
CDK5RAP3-228ENST00000583363 M0QZ24 198 aa12.4□□□□□ -0.42
CDK5RAP3-228ENST00000583363 EIF3GO75821 320 aaKnown RBP eCLIP12.4□□□□□ -0.42
CDK5RAP3-228ENST00000583363 FOLR2P14207 255 aa12.4□□□□□ -0.42
CDK5RAP3-228ENST00000583363 C1orf194Q5T5A4 169 aa12.4□□□□□ -0.42
CDK5RAP3-228ENST00000583363 LEMD1Q68G75 181 aa12.4□□□□□ -0.42
CDK5RAP3-228ENST00000583363 C16orf54Q6UWD8 224 aa12.4□□□□□ -0.42
CDK5RAP3-228ENST00000583363 ZNF767PQ75MW2 155 aa12.4□□□□□ -0.42
CDK5RAP3-228ENST00000583363 SSX7Q7RTT5 188 aa12.4□□□□□ -0.42
CDK5RAP3-228ENST00000583363 NARS2Q96I59 477 aaKnown RBP12.4□□□□□ -0.42
CDK5RAP3-228ENST00000583363 RHPN1-AS1Q9BWJ2 59 aa12.4□□□□□ -0.42
CDK5RAP3-228ENST00000583363 SLC25A22Q9H936 323 aa12.4□□□□□ -0.42
CDK5RAP3-228ENST00000583363 RNF24Q9Y225 148 aa12.4□□□□□ -0.42
CDK5RAP3-228ENST00000583363 ZNF705EA8MWA4 302 aaPredicted RBP12.39□□□□□ -0.43
CDK5RAP3-228ENST00000583363 STAG3L2P0CL84 134 aa12.39□□□□□ -0.43
CDK5RAP3-228ENST00000583363 STAG3L3P0CL85 134 aa12.39□□□□□ -0.43
CDK5RAP3-228ENST00000583363 LRRC20Q8TCA0 184 aa12.39□□□□□ -0.43
CDK5RAP3-228ENST00000583363 SAT2Q96F10 170 aaPredicted RBP12.39□□□□□ -0.43
CDK5RAP3-228ENST00000583363 ELOVL1Q9BW60 279 aa12.39□□□□□ -0.43
CDK5RAP3-228ENST00000583363 SLC25A2Q9BXI2 301 aa12.39□□□□□ -0.43
CDK5RAP3-228ENST00000583363 SIGLEC8Q9NYZ4 499 aa12.39□□□□□ -0.43
CDK5RAP3-228ENST00000583363 HMGB3O15347 200 aaKnown RBP12.38□□□□□ -0.43
CDK5RAP3-228ENST00000583363 H2AFB1P0C5Y9 115 aa12.38□□□□□ -0.43
CDK5RAP3-228ENST00000583363 TAS2R45P59539 299 aa12.38□□□□□ -0.43
CDK5RAP3-228ENST00000583363 BLOC1S1P78537 153 aa12.38□□□□□ -0.43
CDK5RAP3-228ENST00000583363 OR8I2Q8N0Y5 310 aa12.38□□□□□ -0.43
CDK5RAP3-228ENST00000583363 WFDC9Q8NEX5 89 aa12.38□□□□□ -0.43
CDK5RAP3-228ENST00000583363 GLMPQ8WWB7 406 aa12.38□□□□□ -0.43
CDK5RAP3-228ENST00000583363 GRAMD2BQ96HH9 432 aa12.38□□□□□ -0.43
CDK5RAP3-228ENST00000583363 TMEM231Q9H6L2 316 aa12.38□□□□□ -0.43
CDK5RAP3-228ENST00000583363 MRPS12O15235 138 aaKnown RBP12.37□□□□□ -0.43
CDK5RAP3-228ENST00000583363 BMI1P35226 326 aa12.37□□□□□ -0.43
CDK5RAP3-228ENST00000583363 LCN15Q6UWW0 184 aa12.37□□□□□ -0.43
CDK5RAP3-228ENST00000583363 STXBP6Q8NFX7 210 aa12.37□□□□□ -0.43
CDK5RAP3-228ENST00000583363 SFT2D1Q8WV19 159 aa12.37□□□□□ -0.43
CDK5RAP3-228ENST00000583363 ZNF503Q96F45 646 aa12.37□□□□□ -0.43
CDK5RAP3-228ENST00000583363 TMEM14CQ9P0S9 112 aa12.37□□□□□ -0.43
CDK5RAP3-228ENST00000583363 SMAD5-AS1Q9Y6J3 95 aa12.37□□□□□ -0.43
CDK5RAP3-228ENST00000583363 TRAV1-1A0A0B4J248 108 aa12.36□□□□□ -0.43
CDK5RAP3-228ENST00000583363 MAP1LC3B2A6NCE7 125 aa12.36□□□□□ -0.43
CDK5RAP3-228ENST00000583363 RGS13O14921 159 aa12.36□□□□□ -0.43
CDK5RAP3-228ENST00000583363 RPL7P18124 248 aaKnown RBP12.36□□□□□ -0.43
CDK5RAP3-228ENST00000583363 KHDC3LQ587J8 217 aa12.36□□□□□ -0.43
CDK5RAP3-228ENST00000583363 FAM90A2PQ658T7 463 aa12.36□□□□□ -0.43
CDK5RAP3-228ENST00000583363 PQLC2Q6ZP29 291 aa12.36□□□□□ -0.43
CDK5RAP3-228ENST00000583363 BPIFA4PQ86YQ2 179 aa12.36□□□□□ -0.43
CDK5RAP3-228ENST00000583363 GPR82Q96P67 336 aa12.36□□□□□ -0.43
CDK5RAP3-228ENST00000583363 PAXXQ9BUH6 204 aa12.36□□□□□ -0.43
CDK5RAP3-228ENST00000583363 MAP1LC3BQ9GZQ8 125 aa12.36□□□□□ -0.43
CDK5RAP3-228ENST00000583363 OR51M1Q9H341 326 aa12.36□□□□□ -0.43
CDK5RAP3-228ENST00000583363 MLXQ9UH92 298 aa12.36□□□□□ -0.43
CDK5RAP3-228ENST00000583363 CXorf1O96002 111 aa12.35□□□□□ -0.43
CDK5RAP3-228ENST00000583363 ARL14EPLP0DKL9 152 aa12.35□□□□□ -0.43
CDK5RAP3-228ENST00000583363 FGF8P55075 233 aaPredicted RBP12.35□□□□□ -0.43
CDK5RAP3-228ENST00000583363 DEFB114Q30KQ6 69 aa12.35□□□□□ -0.43
CDK5RAP3-228ENST00000583363 LYPD6BQ8NI32 183 aa12.35□□□□□ -0.43
CDK5RAP3-228ENST00000583363 OR7C2O60412 319 aa12.34□□□□□ -0.43
CDK5RAP3-228ENST00000583363 NMBP08949 121 aa12.34□□□□□ -0.43
CDK5RAP3-228ENST00000583363 PYYP10082 97 aa12.34□□□□□ -0.43
CDK5RAP3-228ENST00000583363 GP9P14770 177 aa12.34□□□□□ -0.43
CDK5RAP3-228ENST00000583363 GCHFRP30047 84 aa12.34□□□□□ -0.43
CDK5RAP3-228ENST00000583363 SIGLEC15Q6ZMC9 328 aa12.34□□□□□ -0.43
CDK5RAP3-228ENST00000583363 TCF24Q7RTU0 167 aa12.34□□□□□ -0.43
CDK5RAP3-228ENST00000583363 SUN5Q8TC36 379 aa12.34□□□□□ -0.43
CDK5RAP3-228ENST00000583363 PCNPQ8WW12 178 aaKnown RBP12.34□□□□□ -0.43
CDK5RAP3-228ENST00000583363 FXYD5Q96DB9 178 aa12.34□□□□□ -0.43
CDK5RAP3-228ENST00000583363 C17orf77Q96MU5 243 aa12.34□□□□□ -0.43
CDK5RAP3-228ENST00000583363 SELENOKQ9Y6D0 94 aa12.34□□□□□ -0.43
CDK5RAP3-228ENST00000583363 HELTA6NFD8 242 aa12.33□□□□□ -0.44
CDK5RAP3-228ENST00000583363 ZNF785A8K8V0 405 aa12.33□□□□□ -0.44
CDK5RAP3-228ENST00000583363 H3BQ15 152 aa12.33□□□□□ -0.44
CDK5RAP3-228ENST00000583363 HBE1P02100 147 aa12.33□□□□□ -0.44
CDK5RAP3-228ENST00000583363 CD5P06127 495 aa12.33□□□□□ -0.44
CDK5RAP3-228ENST00000583363 IGLC2P0DOY2 106 aa12.33□□□□□ -0.44
CDK5RAP3-228ENST00000583363 HIST1H1EP10412 219 aaKnown RBP12.33□□□□□ -0.44
CDK5RAP3-228ENST00000583363 CD33P20138 364 aa12.33□□□□□ -0.44
CDK5RAP3-228ENST00000583363 GALR1P47211 349 aa12.33□□□□□ -0.44
CDK5RAP3-228ENST00000583363 RAB14P61106 215 aa12.33□□□□□ -0.44
CDK5RAP3-228ENST00000583363 CCL20P78556 96 aa12.33□□□□□ -0.44
CDK5RAP3-228ENST00000583363 DYNLRB2Q8TF09 96 aa12.33□□□□□ -0.44
CDK5RAP3-228ENST00000583363 TMPRSS5Q9H3S3 457 aa12.33□□□□□ -0.44
CDK5RAP3-228ENST00000583363 A0A087X0K7 114 aa12.32□□□□□ -0.44
CDK5RAP3-228ENST00000583363 TEX46H3BTG2 121 aa12.32□□□□□ -0.44
CDK5RAP3-228ENST00000583363 SAP30O75446 220 aa12.32□□□□□ -0.44
CDK5RAP3-228ENST00000583363 OR10J4P0C629 311 aa12.32□□□□□ -0.44
CDK5RAP3-228ENST00000583363 NBEAP1P0C6P0 100 aa12.32□□□□□ -0.44
CDK5RAP3-228ENST00000583363 HRH4Q9H3N8 390 aa12.32□□□□□ -0.44
CDK5RAP3-228ENST00000583363 ZNF586Q9NXT0 402 aa12.32□□□□□ -0.44
CDK5RAP3-228ENST00000583363 A0A1B0GV50 99 aa12.31□□□□□ -0.44
CDK5RAP3-228ENST00000583363 SNRPCP09234 159 aaKnown RBP12.31□□□□□ -0.44
CDK5RAP3-228ENST00000583363 ATF4P18848 351 aaPredicted RBP12.31□□□□□ -0.44
CDK5RAP3-228ENST00000583363 RPL11P62913 178 aaKnown RBP12.31□□□□□ -0.44
CDK5RAP3-228ENST00000583363 CLLU1Q5K131 121 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms