RNA–Protein interactions for RNA: ENST00000582980.1

CDH8-208, Transcript of cadherin 8, humanhuman

TSL 5

Gene CDH8, Length 376 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-208ENST00000582980 MIR17HGQ75NE6 70 aa9.39□□□□□ -0.91
CDH8-208ENST00000582980 RPP25LQ8N5L8 163 aaKnown RBP9.39□□□□□ -0.91
CDH8-208ENST00000582980 STXBP6Q8NFX7 210 aa9.39□□□□□ -0.91
CDH8-208ENST00000582980 OR2K2Q8NGT1 345 aa9.39□□□□□ -0.91
CDH8-208ENST00000582980 GLMPQ8WWB7 406 aa9.39□□□□□ -0.91
CDH8-208ENST00000582980 MLXQ9UH92 298 aa9.39□□□□□ -0.91
CDH8-208ENST00000582980 CTXND1A0A1B0GTU2 59 aa9.38□□□□□ -0.91
CDH8-208ENST00000582980 SULT1A2P50226 295 aa9.38□□□□□ -0.91
CDH8-208ENST00000582980 LEMD1Q68G75 181 aa9.38□□□□□ -0.91
CDH8-208ENST00000582980 ALKAL2Q6UX46 152 aa9.38□□□□□ -0.91
CDH8-208ENST00000582980 SIGLEC15Q6ZMC9 328 aa9.38□□□□□ -0.91
CDH8-208ENST00000582980 ADAMTSL5Q6ZMM2 481 aa9.38□□□□□ -0.91
CDH8-208ENST00000582980 TCF24Q7RTU0 167 aa9.38□□□□□ -0.91
CDH8-208ENST00000582980 BPIFA4PQ86YQ2 179 aa9.38□□□□□ -0.91
CDH8-208ENST00000582980 FAM213BQ8TBF2 198 aa9.38□□□□□ -0.91
CDH8-208ENST00000582980 TRAV25A0A0B4J276 109 aa9.37□□□□□ -0.91
CDH8-208ENST00000582980 OR7C2O60412 319 aa9.37□□□□□ -0.91
CDH8-208ENST00000582980 IFNA7P01567 189 aa9.37□□□□□ -0.91
CDH8-208ENST00000582980 IGLV1-51P01701 117 aa9.37□□□□□ -0.91
CDH8-208ENST00000582980 RPL11P62913 178 aaKnown RBP9.37□□□□□ -0.91
CDH8-208ENST00000582980 PAFAH1B2P68402 229 aa9.37□□□□□ -0.91
CDH8-208ENST00000582980 DEFB114Q30KQ6 69 aa9.37□□□□□ -0.91
CDH8-208ENST00000582980 MORN5Q5VZ52 161 aa9.37□□□□□ -0.91
CDH8-208ENST00000582980 SPATA31B1PQ5VZV4 182 aa9.37□□□□□ -0.91
CDH8-208ENST00000582980 LCN12Q6JVE5 192 aa9.37□□□□□ -0.91
CDH8-208ENST00000582980 TEX261Q6UWH6 196 aa9.37□□□□□ -0.91
CDH8-208ENST00000582980 PQLC2Q6ZP29 291 aa9.37□□□□□ -0.91
CDH8-208ENST00000582980 RBPMS2Q6ZRY4 209 aaKnown RBP9.37□□□□□ -0.91
CDH8-208ENST00000582980 RNF141Q8WVD5 230 aa9.37□□□□□ -0.91
CDH8-208ENST00000582980 RAB24Q969Q5 203 aa9.37□□□□□ -0.91
CDH8-208ENST00000582980 TRAV5A0A0B4J249 113 aa9.36□□□□□ -0.91
CDH8-208ENST00000582980 IGLL1P15814 213 aa9.36□□□□□ -0.91
CDH8-208ENST00000582980 ATF4P18848 351 aaPredicted RBP9.36□□□□□ -0.91
CDH8-208ENST00000582980 MEOX2P50222 304 aa9.36□□□□□ -0.91
CDH8-208ENST00000582980 CD300EQ496F6 205 aaPredicted RBP9.36□□□□□ -0.91
CDH8-208ENST00000582980 FAM74A1Q5RGS3 127 aa9.36□□□□□ -0.91
CDH8-208ENST00000582980 SAMD13Q5VXD3 122 aa9.36□□□□□ -0.91
CDH8-208ENST00000582980 FAM90A2PQ658T7 463 aa9.36□□□□□ -0.91
CDH8-208ENST00000582980 FAM167A-AS1Q96KT0 104 aa9.36□□□□□ -0.91
CDH8-208ENST00000582980 PAXXQ9BUH6 204 aa9.36□□□□□ -0.91
CDH8-208ENST00000582980 SLC25A2Q9BXI2 301 aa9.36□□□□□ -0.91
CDH8-208ENST00000582980 PLA2G2EQ9NZK7 142 aa9.36□□□□□ -0.91
CDH8-208ENST00000582980 TMEM14CQ9P0S9 112 aa9.36□□□□□ -0.91
CDH8-208ENST00000582980 TRRAPQ9Y4A5 3859 aa9.35□□□□□ -0.91
CDH8-208ENST00000582980 MAP1LC3B2A6NCE7 125 aa9.35□□□□□ -0.91
CDH8-208ENST00000582980 ZNF785A8K8V0 405 aa9.35□□□□□ -0.91
CDH8-208ENST00000582980 ZNF705EA8MWA4 302 aaPredicted RBP9.35□□□□□ -0.91
CDH8-208ENST00000582980 TEX46H3BTG2 121 aa9.35□□□□□ -0.91
CDH8-208ENST00000582980 TSPAN4O14817 238 aa9.35□□□□□ -0.91
CDH8-208ENST00000582980 HMGB3O15347 200 aaKnown RBP9.35□□□□□ -0.91
CDH8-208ENST00000582980 CXorf1O96002 111 aa9.35□□□□□ -0.91
CDH8-208ENST00000582980 STAG3L2P0CL84 134 aa9.35□□□□□ -0.91
CDH8-208ENST00000582980 STAG3L3P0CL85 134 aa9.35□□□□□ -0.91
CDH8-208ENST00000582980 GP9P14770 177 aa9.35□□□□□ -0.91
CDH8-208ENST00000582980 FHITP49789 147 aa9.35□□□□□ -0.91
CDH8-208ENST00000582980 TMEM61Q8N0U2 210 aa9.35□□□□□ -0.91
CDH8-208ENST00000582980 ZNF680Q8NEM1 530 aa9.35□□□□□ -0.91
CDH8-208ENST00000582980 LRRC20Q8TCA0 184 aa9.35□□□□□ -0.91
CDH8-208ENST00000582980 MAP1LC3BQ9GZQ8 125 aa9.35□□□□□ -0.91
CDH8-208ENST00000582980 OR51M1Q9H341 326 aa9.35□□□□□ -0.91
CDH8-208ENST00000582980 UBQLN2Q9UHD9 624 aa9.35□□□□□ -0.91
CDH8-208ENST00000582980 IGKV3-7A0A075B6H7 116 aa9.34□□□□□ -0.91
CDH8-208ENST00000582980 A0A087X0K7 114 aa9.34□□□□□ -0.91
CDH8-208ENST00000582980 DNASE2O00115 360 aaPredicted RBP9.34□□□□□ -0.91
CDH8-208ENST00000582980 MRPS12O15235 138 aaKnown RBP9.34□□□□□ -0.91
CDH8-208ENST00000582980 WIPF1O43516 503 aa9.34□□□□□ -0.91
CDH8-208ENST00000582980 HBE1P02100 147 aa9.34□□□□□ -0.91
CDH8-208ENST00000582980 H2AFB1P0C5Y9 115 aa9.34□□□□□ -0.91
CDH8-208ENST00000582980 ARL14EPLP0DKL9 152 aa9.34□□□□□ -0.91
CDH8-208ENST00000582980 IGLC2P0DOY2 106 aa9.34□□□□□ -0.91
CDH8-208ENST00000582980 HIST1H1EP10412 219 aaKnown RBP9.34□□□□□ -0.91
CDH8-208ENST00000582980 UBE2L3P68036 154 aaKnown RBP9.34□□□□□ -0.91
CDH8-208ENST00000582980 ZNF726P1Q15940 193 aa9.34□□□□□ -0.91
CDH8-208ENST00000582980 GUK1Q16774 197 aa9.34□□□□□ -0.91
CDH8-208ENST00000582980 LCN15Q6UWW0 184 aa9.34□□□□□ -0.91
CDH8-208ENST00000582980 MBD3L1Q8WWY6 194 aa9.34□□□□□ -0.91
CDH8-208ENST00000582980 SPAG8Q99932 426 aaPredicted RBP9.34□□□□□ -0.91
CDH8-208ENST00000582980 HRH4Q9H3N8 390 aa9.34□□□□□ -0.91
CDH8-208ENST00000582980 NRN1Q9NPD7 142 aa9.34□□□□□ -0.91
CDH8-208ENST00000582980 ZMAT5Q9UDW3 170 aaKnown RBP9.34□□□□□ -0.91
CDH8-208ENST00000582980 TRAV2A0A0B4J234 112 aa9.33□□□□□ -0.92
CDH8-208ENST00000582980 OR4C46A6NHA9 309 aa9.33□□□□□ -0.92
CDH8-208ENST00000582980 EIF3GO75821 320 aaKnown RBP eCLIP9.33□□□□□ -0.92
CDH8-208ENST00000582980 PYYP10082 97 aa9.33□□□□□ -0.92
CDH8-208ENST00000582980 BLOC1S1P78537 153 aa9.33□□□□□ -0.92
CDH8-208ENST00000582980 GUCA2BQ16661 112 aa9.33□□□□□ -0.92
CDH8-208ENST00000582980 SSX7Q7RTT5 188 aa9.33□□□□□ -0.92
CDH8-208ENST00000582980 IQCF2Q8IXL9 164 aa9.33□□□□□ -0.92
CDH8-208ENST00000582980 GBGT1Q8N5D6 347 aa9.33□□□□□ -0.92
CDH8-208ENST00000582980 SFT2D1Q8WV19 159 aa9.33□□□□□ -0.92
CDH8-208ENST00000582980 SAT2Q96F10 170 aaPredicted RBP9.33□□□□□ -0.92
CDH8-208ENST00000582980 MS4A6AQ9H2W1 248 aa9.33□□□□□ -0.92
CDH8-208ENST00000582980 TMEM167BQ9NRX6 74 aa9.33□□□□□ -0.92
CDH8-208ENST00000582980 SELENOKQ9Y6D0 94 aa9.33□□□□□ -0.92
CDH8-208ENST00000582980 SMAD5-AS1Q9Y6J3 95 aa9.33□□□□□ -0.92
CDH8-208ENST00000582980 OR10J4P0C629 311 aa9.32□□□□□ -0.92
CDH8-208ENST00000582980 NBEAP1P0C6P0 100 aa9.32□□□□□ -0.92
CDH8-208ENST00000582980 GCHFRP30047 84 aa9.32□□□□□ -0.92
CDH8-208ENST00000582980 FGF8P55075 233 aaPredicted RBP9.32□□□□□ -0.92
CDH8-208ENST00000582980 PDE6HQ13956 83 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms