RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 IGKV1OR2-108A0A075B7D4 117 aa10.38□□□□□ -0.75
CSNK1D-220ENST00000581737 B4DEV8 164 aa10.38□□□□□ -0.75
CSNK1D-220ENST00000581737 C11orf94C9JXX5 98 aa10.38□□□□□ -0.75
CSNK1D-220ENST00000581737 LINC01619G3V211 115 aa10.38□□□□□ -0.75
CSNK1D-220ENST00000581737 PLP1P60201 277 aa10.38□□□□□ -0.75
CSNK1D-220ENST00000581737 FHL3Q13643 280 aa10.38□□□□□ -0.75
CSNK1D-220ENST00000581737 DEFB136Q30KP8 78 aa10.38□□□□□ -0.75
CSNK1D-220ENST00000581737 CYB561D1Q8N8Q1 229 aa10.38□□□□□ -0.75
CSNK1D-220ENST00000581737 OR11H1Q8NG94 326 aa10.38□□□□□ -0.75
CSNK1D-220ENST00000581737 TVP23CQ96ET8 276 aa10.38□□□□□ -0.75
CSNK1D-220ENST00000581737 PEF1Q9UBV8 284 aaKnown RBP10.38□□□□□ -0.75
CSNK1D-220ENST00000581737 DMRT1Q9Y5R6 373 aa10.38□□□□□ -0.75
CSNK1D-220ENST00000581737 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.37□□□□□ -0.75
CSNK1D-220ENST00000581737 HMGB3O15347 200 aaKnown RBP10.37□□□□□ -0.75
CSNK1D-220ENST00000581737 PAGE4O60829 102 aa10.37□□□□□ -0.75
CSNK1D-220ENST00000581737 MFAP2P55001 183 aa10.37□□□□□ -0.75
CSNK1D-220ENST00000581737 GUCA2BQ16661 112 aa10.37□□□□□ -0.75
CSNK1D-220ENST00000581737 Q56UQ5 140 aa10.37□□□□□ -0.75
CSNK1D-220ENST00000581737 GCSAMLQ5JQS6 135 aa10.37□□□□□ -0.75
CSNK1D-220ENST00000581737 CST9LP1Q5W188 147 aa10.37□□□□□ -0.75
CSNK1D-220ENST00000581737 TCEAL7Q9BRU2 100 aa10.37□□□□□ -0.75
CSNK1D-220ENST00000581737 C21orf62Q9NYP8 219 aa10.37□□□□□ -0.75
CSNK1D-220ENST00000581737 HIGD1AQ9Y241 93 aa10.37□□□□□ -0.75
CSNK1D-220ENST00000581737 COL7A1Q02388 2944 aa10.37□□□□□ -0.75
CSNK1D-220ENST00000581737 RYR2Q92736 4967 aa10.36□□□□□ -0.75
CSNK1D-220ENST00000581737 IGKV1D-37A0A075B6S9 117 aa10.36□□□□□ -0.75
CSNK1D-220ENST00000581737 IGHV4OR15-8A0A075B7B6 117 aa10.36□□□□□ -0.75
CSNK1D-220ENST00000581737 A0A087WW49 117 aa10.36□□□□□ -0.75
CSNK1D-220ENST00000581737 K7EIM0 57 aa10.36□□□□□ -0.75
CSNK1D-220ENST00000581737 TOMM40O96008 361 aa10.36□□□□□ -0.75
CSNK1D-220ENST00000581737 IGLC1P0CG04 106 aa10.36□□□□□ -0.75
CSNK1D-220ENST00000581737 RD3LP0DJH9 198 aa10.36□□□□□ -0.75
CSNK1D-220ENST00000581737 FCGR2BP31994 310 aaPredicted RBP10.36□□□□□ -0.75
CSNK1D-220ENST00000581737 YPEL3P61236 119 aaPredicted RBP10.36□□□□□ -0.75
CSNK1D-220ENST00000581737 UBE2L3P68036 154 aaKnown RBP10.36□□□□□ -0.75
CSNK1D-220ENST00000581737 MLANAQ16655 118 aa10.36□□□□□ -0.75
CSNK1D-220ENST00000581737 LINC00482Q8N8I6 264 aa10.36□□□□□ -0.75
CSNK1D-220ENST00000581737 OR51G1Q8NGK1 321 aa10.36□□□□□ -0.75
CSNK1D-220ENST00000581737 ZNF502Q8TBZ5 544 aa10.36□□□□□ -0.75
CSNK1D-220ENST00000581737 Q8WTZ3 238 aa10.36□□□□□ -0.75
CSNK1D-220ENST00000581737 RPUSD4Q96CM3 377 aaKnown RBP10.36□□□□□ -0.75
CSNK1D-220ENST00000581737 SMIM7Q9BQ49 75 aa10.36□□□□□ -0.75
CSNK1D-220ENST00000581737 SEPSECSQ9HD40 501 aaKnown RBP10.36□□□□□ -0.75
CSNK1D-220ENST00000581737 SMCO4Q9NRQ5 59 aa10.36□□□□□ -0.75
CSNK1D-220ENST00000581737 NAT8Q9UHE5 227 aa10.36□□□□□ -0.75
CSNK1D-220ENST00000581737 PUS1Q9Y606 427 aaKnown RBP eCLIP10.36□□□□□ -0.75
CSNK1D-220ENST00000581737 DYNC2H1Q8NCM8 4307 aaKnown RBP10.36□□□□□ -0.75
CSNK1D-220ENST00000581737 NOTCH3Q9UM47 2321 aa10.35□□□□□ -0.75
CSNK1D-220ENST00000581737 ZNF727A8MUV8 499 aa10.35□□□□□ -0.75
CSNK1D-220ENST00000581737 C9JQL5 133 aa10.35□□□□□ -0.75
CSNK1D-220ENST00000581737 H3BQ15 152 aa10.35□□□□□ -0.75
CSNK1D-220ENST00000581737 CD33P20138 364 aa10.35□□□□□ -0.75
CSNK1D-220ENST00000581737 BTN1A1Q13410 526 aa10.35□□□□□ -0.75
CSNK1D-220ENST00000581737 OXLD1Q5BKU9 147 aa10.35□□□□□ -0.75
CSNK1D-220ENST00000581737 MIR17HGQ75NE6 70 aa10.35□□□□□ -0.75
CSNK1D-220ENST00000581737 OR1B1Q8NGR6 318 aa10.35□□□□□ -0.75
CSNK1D-220ENST00000581737 MRAPQ8TCY5 172 aa10.35□□□□□ -0.75
CSNK1D-220ENST00000581737 CCDC140Q96MF4 163 aa10.35□□□□□ -0.75
CSNK1D-220ENST00000581737 DUX3Q96PT4 197 aa10.35□□□□□ -0.75
CSNK1D-220ENST00000581737 GPR61Q9BZJ8 451 aa10.35□□□□□ -0.75
CSNK1D-220ENST00000581737 RPS10P5Q9NQ39 176 aa10.35□□□□□ -0.75
CSNK1D-220ENST00000581737 A0A1W2PRE2 83 aa10.34□□□□□ -0.75
CSNK1D-220ENST00000581737 NUPL2O15504 423 aaKnown RBP10.34□□□□□ -0.75
CSNK1D-220ENST00000581737 GGCTO75223 188 aaKnown RBP10.34□□□□□ -0.75
CSNK1D-220ENST00000581737 ORM2P19652 201 aa10.34□□□□□ -0.75
CSNK1D-220ENST00000581737 HOXD3P31249 432 aaPredicted RBP10.34□□□□□ -0.75
CSNK1D-220ENST00000581737 GPR183P32249 361 aa10.34□□□□□ -0.75
CSNK1D-220ENST00000581737 ARL3P36405 182 aa10.34□□□□□ -0.75
CSNK1D-220ENST00000581737 LYZP61626 148 aa10.34□□□□□ -0.75
CSNK1D-220ENST00000581737 ZNF90Q03938 601 aa10.34□□□□□ -0.75
CSNK1D-220ENST00000581737 RPEL1Q2QD12 228 aa10.34□□□□□ -0.75
CSNK1D-220ENST00000581737 CLEC19AQ6UXS0 136 aa10.34□□□□□ -0.75
CSNK1D-220ENST00000581737 LINC00305Q7Z4B0 112 aa10.34□□□□□ -0.75
CSNK1D-220ENST00000581737 WFDC9Q8NEX5 89 aa10.34□□□□□ -0.75
CSNK1D-220ENST00000581737 PAXXQ9BUH6 204 aa10.34□□□□□ -0.75
CSNK1D-220ENST00000581737 MCRIP2Q9BUT9 160 aaKnown RBP10.34□□□□□ -0.75
CSNK1D-220ENST00000581737 TMPRSS5Q9H3S3 457 aa10.34□□□□□ -0.75
CSNK1D-220ENST00000581737 DOK5Q9P104 306 aa10.34□□□□□ -0.75
CSNK1D-220ENST00000581737 A0A087WWC5 75 aa10.33□□□□□ -0.76
CSNK1D-220ENST00000581737 IGHV3-21A0A0B4J1V1 117 aa10.33□□□□□ -0.76
CSNK1D-220ENST00000581737 BMPR1BO00238 502 aa10.33□□□□□ -0.76
CSNK1D-220ENST00000581737 SCO1O75880 301 aa10.33□□□□□ -0.76
CSNK1D-220ENST00000581737 TRBV12-3P01733 135 aa10.33□□□□□ -0.76
CSNK1D-220ENST00000581737 IGHV3-48P01763 117 aa10.33□□□□□ -0.76
CSNK1D-220ENST00000581737 IGHV3-23P01764 117 aa10.33□□□□□ -0.76
CSNK1D-220ENST00000581737 GATA2P23769 480 aaPredicted RBP10.33□□□□□ -0.76
CSNK1D-220ENST00000581737 CD81P60033 236 aa10.33□□□□□ -0.76
CSNK1D-220ENST00000581737 UBE2G2P60604 165 aa10.33□□□□□ -0.76
CSNK1D-220ENST00000581737 TMEM241Q24JQ0 296 aa10.33□□□□□ -0.76
CSNK1D-220ENST00000581737 TIGITQ495A1 244 aa10.33□□□□□ -0.76
CSNK1D-220ENST00000581737 SPATA31B1PQ5VZV4 182 aa10.33□□□□□ -0.76
CSNK1D-220ENST00000581737 OR51M1Q9H341 326 aa10.33□□□□□ -0.76
CSNK1D-220ENST00000581737 AURKAIP1Q9NWT8 199 aaPredicted RBP10.33□□□□□ -0.76
CSNK1D-220ENST00000581737 S4R3C0 116 aa10.33□□□□□ -0.76
CSNK1D-220ENST00000581737 OVOL1O14753 267 aa10.32□□□□□ -0.76
CSNK1D-220ENST00000581737 TGOLN2O43493 480 aa10.32□□□□□ -0.76
CSNK1D-220ENST00000581737 CLEC3BP05452 202 aa10.32□□□□□ -0.76
CSNK1D-220ENST00000581737 PSG1P11464 419 aa10.32□□□□□ -0.76
CSNK1D-220ENST00000581737 SLURP1P55000 103 aa10.32□□□□□ -0.76
CSNK1D-220ENST00000581737 RELQ04864 619 aaPredicted RBP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms