RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 C17orf77Q96MU5 243 aa14.15□□□□□ -0.14
SREBF1-220ENST00000581707 MFFQ9GZY8 342 aa14.15□□□□□ -0.14
SREBF1-220ENST00000581707 C11orf1Q9H5F2 150 aa14.15□□□□□ -0.14
SREBF1-220ENST00000581707 IGHV4-28A0A0C4DH34 117 aa14.14□□□□□ -0.15
SREBF1-220ENST00000581707 GOSR2O14653 212 aa14.14□□□□□ -0.15
SREBF1-220ENST00000581707 RBMY1A1P0DJD3 496 aaKnown RBP14.14□□□□□ -0.15
SREBF1-220ENST00000581707 RBMY1CP0DJD4 496 aa14.14□□□□□ -0.15
SREBF1-220ENST00000581707 PVALBP20472 110 aaPredicted RBP14.14□□□□□ -0.15
SREBF1-220ENST00000581707 S100A10P60903 97 aa14.14□□□□□ -0.15
SREBF1-220ENST00000581707 IFITM3Q01628 133 aa14.14□□□□□ -0.15
SREBF1-220ENST00000581707 RBMY1FQ15415 496 aaKnown RBP14.14□□□□□ -0.15
SREBF1-220ENST00000581707 SPATA31B1PQ5VZV4 182 aa14.14□□□□□ -0.15
SREBF1-220ENST00000581707 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.14□□□□□ -0.15
SREBF1-220ENST00000581707 ARL6Q9H0F7 186 aa14.14□□□□□ -0.15
SREBF1-220ENST00000581707 GPN1Q9HCN4 374 aaPredicted RBP14.14□□□□□ -0.15
SREBF1-220ENST00000581707 RPRMQ9NS64 109 aa14.14□□□□□ -0.15
SREBF1-220ENST00000581707 X6R8D5 127 aa14.14□□□□□ -0.15
SREBF1-220ENST00000581707 RYR2Q92736 4967 aa14.14□□□□□ -0.15
SREBF1-220ENST00000581707 AGPAT2O15120 278 aa14.13□□□□□ -0.15
SREBF1-220ENST00000581707 CST7O76096 145 aa14.13□□□□□ -0.15
SREBF1-220ENST00000581707 RPL7P18124 248 aaKnown RBP14.13□□□□□ -0.15
SREBF1-220ENST00000581707 IL15RAQ13261 267 aa14.13□□□□□ -0.15
SREBF1-220ENST00000581707 EBLN2Q6P2I7 272 aa14.13□□□□□ -0.15
SREBF1-220ENST00000581707 ZNF546Q86UE3 836 aa14.13□□□□□ -0.15
SREBF1-220ENST00000581707 OR4B1Q8NGF8 309 aa14.13□□□□□ -0.15
SREBF1-220ENST00000581707 C20orf173Q96LM9 149 aa14.13□□□□□ -0.15
SREBF1-220ENST00000581707 CLUHP3Q96NS8 147 aa14.13□□□□□ -0.15
SREBF1-220ENST00000581707 UHRF2Q96PU4 802 aa14.13□□□□□ -0.15
SREBF1-220ENST00000581707 FAM24AA6NFZ4 105 aa14.12□□□□□ -0.15
SREBF1-220ENST00000581707 F6UB75 175 aa14.12□□□□□ -0.15
SREBF1-220ENST00000581707 RAB32Q13637 225 aa14.12□□□□□ -0.15
SREBF1-220ENST00000581707 PXDC1Q5TGL8 231 aa14.12□□□□□ -0.15
SREBF1-220ENST00000581707 PATE2Q6UY27 113 aa14.12□□□□□ -0.15
SREBF1-220ENST00000581707 BATF3Q9NR55 127 aa14.12□□□□□ -0.15
SREBF1-220ENST00000581707 DNAH1Q9P2D7 4330 aa14.11□□□□□ -0.15
SREBF1-220ENST00000581707 A0A0J9YX75 114 aa14.11□□□□□ -0.15
SREBF1-220ENST00000581707 FXYD7P58549 80 aa14.11□□□□□ -0.15
SREBF1-220ENST00000581707 FGL1Q08830 312 aa14.11□□□□□ -0.15
SREBF1-220ENST00000581707 FAM78BQ5VT40 261 aa14.11□□□□□ -0.15
SREBF1-220ENST00000581707 NRARPQ7Z6K4 114 aa14.11□□□□□ -0.15
SREBF1-220ENST00000581707 MGST2Q99735 147 aa14.11□□□□□ -0.15
SREBF1-220ENST00000581707 ARV1Q9H2C2 271 aa14.11□□□□□ -0.15
SREBF1-220ENST00000581707 RNF24Q9Y225 148 aa14.11□□□□□ -0.15
SREBF1-220ENST00000581707 PSG9Q00887 426 aa14.1□□□□□ -0.15
SREBF1-220ENST00000581707 RAB31Q13636 194 aa14.1□□□□□ -0.15
SREBF1-220ENST00000581707 HRH4Q9H3N8 390 aa14.1□□□□□ -0.15
SREBF1-220ENST00000581707 LYRM2Q9NU23 88 aaPredicted RBP14.1□□□□□ -0.15
SREBF1-220ENST00000581707 TRAV8-2A0A0B4J237 113 aa14.09□□□□□ -0.15
SREBF1-220ENST00000581707 INMT-MINDY4F8WBC2 141 aa14.09□□□□□ -0.15
SREBF1-220ENST00000581707 CAMLGP49069 296 aa14.09□□□□□ -0.15
SREBF1-220ENST00000581707 SULT1A1P50225 295 aa14.09□□□□□ -0.15
SREBF1-220ENST00000581707 IGFL4Q6B9Z1 124 aa14.09□□□□□ -0.15
SREBF1-220ENST00000581707 TMEM252Q8N6L7 170 aa14.09□□□□□ -0.15
SREBF1-220ENST00000581707 ZNF709Q8N972 641 aa14.09□□□□□ -0.15
SREBF1-220ENST00000581707 LINC00476Q8WZB0 136 aa14.09□□□□□ -0.15
SREBF1-220ENST00000581707 UQCC1Q9NVA1 299 aa14.09□□□□□ -0.15
SREBF1-220ENST00000581707 PLECQ15149 4684 aaKnown RBP14.09□□□□□ -0.15
SREBF1-220ENST00000581707 ELOA3CA0A087WX78 387 aaPredicted RBP14.08□□□□□ -0.16
SREBF1-220ENST00000581707 IGSF23A1L1A6 192 aa14.08□□□□□ -0.16
SREBF1-220ENST00000581707 PRAF2O60831 178 aa14.08□□□□□ -0.16
SREBF1-220ENST00000581707 S100A11P31949 105 aa14.08□□□□□ -0.16
SREBF1-220ENST00000581707 LINC00305Q7Z4B0 112 aa14.08□□□□□ -0.16
SREBF1-220ENST00000581707 STX12Q86Y82 276 aa14.08□□□□□ -0.16
SREBF1-220ENST00000581707 RNF182Q8N6D2 247 aa14.08□□□□□ -0.16
SREBF1-220ENST00000581707 SLC35B3Q9H1N7 401 aa14.08□□□□□ -0.16
SREBF1-220ENST00000581707 A0A087X0K7 114 aa14.07□□□□□ -0.16
SREBF1-220ENST00000581707 COX7A2P2O60397 106 aa14.07□□□□□ -0.16
SREBF1-220ENST00000581707 SIX6O95475 246 aa14.07□□□□□ -0.16
SREBF1-220ENST00000581707 LY6G6CO95867 125 aa14.07□□□□□ -0.16
SREBF1-220ENST00000581707 DEFA1P59665 94 aa14.07□□□□□ -0.16
SREBF1-220ENST00000581707 DEFA3P59666 94 aa14.07□□□□□ -0.16
SREBF1-220ENST00000581707 HBG1P69891 147 aa14.07□□□□□ -0.16
SREBF1-220ENST00000581707 HBG2P69892 147 aa14.07□□□□□ -0.16
SREBF1-220ENST00000581707 VWC2Q2TAL6 325 aa14.07□□□□□ -0.16
SREBF1-220ENST00000581707 ZNF705AQ6ZN79 300 aaPredicted RBP14.07□□□□□ -0.16
SREBF1-220ENST00000581707 WDR83OSQ9Y284 106 aa14.07□□□□□ -0.16
SREBF1-220ENST00000581707 ALMS1Q8TCU4 4167 aa14.07□□□□□ -0.16
SREBF1-220ENST00000581707 A8MTW9 85 aa14.06□□□□□ -0.16
SREBF1-220ENST00000581707 HLA-DMBP28068 263 aa14.06□□□□□ -0.16
SREBF1-220ENST00000581707 C10orf113Q5VZT2 155 aa14.06□□□□□ -0.16
SREBF1-220ENST00000581707 LRRC20Q8TCA0 184 aa14.06□□□□□ -0.16
SREBF1-220ENST00000581707 TMEM37Q8WXS4 190 aa14.06□□□□□ -0.16
SREBF1-220ENST00000581707 NEU1Q99519 415 aa14.06□□□□□ -0.16
SREBF1-220ENST00000581707 MARVELD1Q9BSK0 173 aa14.06□□□□□ -0.16
SREBF1-220ENST00000581707 IGHV3OR16-12A0A075B7B8 117 aa14.05□□□□□ -0.16
SREBF1-220ENST00000581707 ZNF705FA8MVS1 300 aaPredicted RBP14.05□□□□□ -0.16
SREBF1-220ENST00000581707 MRPS12O15235 138 aaKnown RBP14.05□□□□□ -0.16
SREBF1-220ENST00000581707 DUSP14O95147 198 aaKnown RBP14.05□□□□□ -0.16
SREBF1-220ENST00000581707 RLN2P04090 185 aa14.05□□□□□ -0.16
SREBF1-220ENST00000581707 ZNF705DP0CH99 300 aaPredicted RBP14.05□□□□□ -0.16
SREBF1-220ENST00000581707 ZNF705BP0CI00 300 aaPredicted RBP14.05□□□□□ -0.16
SREBF1-220ENST00000581707 MIC13Q5XKP0 118 aa14.05□□□□□ -0.16
SREBF1-220ENST00000581707 Q6ZRG5 221 aa14.05□□□□□ -0.16
SREBF1-220ENST00000581707 ZNF738Q8NE65 137 aa14.05□□□□□ -0.16
SREBF1-220ENST00000581707 C2CD4CQ8TF44 421 aa14.05□□□□□ -0.16
SREBF1-220ENST00000581707 NMES1Q9C002 83 aa14.05□□□□□ -0.16
SREBF1-220ENST00000581707 DNAJC4Q9NNZ3 241 aa14.05□□□□□ -0.16
SREBF1-220ENST00000581707 UBE2L5PA0A1B0GUS4 154 aa14.04□□□□□ -0.16
SREBF1-220ENST00000581707 SMIM9A6NGZ8 99 aa14.04□□□□□ -0.16
SREBF1-220ENST00000581707 C11orf94C9JXX5 98 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms