RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 RNASE4P34096 147 aaKnown RBP0.42□□□□□ -2.34
SMCHD1-206ENST00000581631 PPP1R2P41236 205 aa0.42□□□□□ -2.34
SMCHD1-206ENST00000581631 ATP5G3P48201 142 aa0.42□□□□□ -2.34
SMCHD1-206ENST00000581631 VBP1P61758 197 aa0.42□□□□□ -2.34
SMCHD1-206ENST00000581631 GNG3P63215 75 aa0.42□□□□□ -2.34
SMCHD1-206ENST00000581631 ZNF846Q147U1 533 aa0.42□□□□□ -2.34
SMCHD1-206ENST00000581631 KISS1Q15726 138 aa0.42□□□□□ -2.34
SMCHD1-206ENST00000581631 ESRGQ1W209 222 aa0.42□□□□□ -2.34
SMCHD1-206ENST00000581631 BRMS1LQ5PSV4 323 aa0.42□□□□□ -2.34
SMCHD1-206ENST00000581631 EIF5AL1Q6IS14 154 aaKnown RBP0.42□□□□□ -2.34
SMCHD1-206ENST00000581631 C3orf33Q6P1S2 294 aa0.42□□□□□ -2.34
SMCHD1-206ENST00000581631 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.42□□□□□ -2.34
SMCHD1-206ENST00000581631 Q6ZQT0 140 aa0.42□□□□□ -2.34
SMCHD1-206ENST00000581631 ANGPTL5Q86XS5 388 aa0.42□□□□□ -2.34
SMCHD1-206ENST00000581631 STX19Q8N4C7 294 aa0.42□□□□□ -2.34
SMCHD1-206ENST00000581631 SLC30A7Q8NEW0 376 aa0.42□□□□□ -2.34
SMCHD1-206ENST00000581631 TET1Q8NFU7 2136 aa0.42□□□□□ -2.34
SMCHD1-206ENST00000581631 OR5D16Q8NGK9 328 aa0.42□□□□□ -2.34
SMCHD1-206ENST00000581631 TMEM254Q8TBM7 123 aa0.42□□□□□ -2.34
SMCHD1-206ENST00000581631 NEK7Q8TDX7 302 aa0.42□□□□□ -2.34
SMCHD1-206ENST00000581631 SFT2D1Q8WV19 159 aa0.42□□□□□ -2.34
SMCHD1-206ENST00000581631 AQP3Q92482 292 aa0.42□□□□□ -2.34
SMCHD1-206ENST00000581631 ISOC1Q96CN7 298 aa0.42□□□□□ -2.34
SMCHD1-206ENST00000581631 PLEKHB2Q96CS7 222 aa0.42□□□□□ -2.34
SMCHD1-206ENST00000581631 DGCR14Q96DF8 476 aaKnown RBP0.42□□□□□ -2.34
SMCHD1-206ENST00000581631 LINC00526Q96FQ7 95 aa0.42□□□□□ -2.34
SMCHD1-206ENST00000581631 MCEEQ96PE7 176 aa0.42□□□□□ -2.34
SMCHD1-206ENST00000581631 TP53RKQ96S44 253 aa0.42□□□□□ -2.34
SMCHD1-206ENST00000581631 LYSMD1Q96S90 227 aa0.42□□□□□ -2.34
SMCHD1-206ENST00000581631 SLC25A21Q9BQT8 299 aaPredicted RBP0.42□□□□□ -2.34
SMCHD1-206ENST00000581631 MAP1LC3BQ9GZQ8 125 aa0.42□□□□□ -2.34
SMCHD1-206ENST00000581631 C6orf62Q9GZU0 229 aaPredicted RBP0.42□□□□□ -2.34
SMCHD1-206ENST00000581631 RNASE7Q9H1E1 156 aaKnown RBP0.42□□□□□ -2.34
SMCHD1-206ENST00000581631 BCL2L10Q9HD36 194 aa0.42□□□□□ -2.34
SMCHD1-206ENST00000581631 SPANXA1Q9NS26 97 aa0.42□□□□□ -2.34
SMCHD1-206ENST00000581631 SPANXCQ9NY87 97 aa0.42□□□□□ -2.34
SMCHD1-206ENST00000581631 TP73-AS1Q9UF72 201 aa0.42□□□□□ -2.34
SMCHD1-206ENST00000581631 LY96Q9Y6Y9 160 aa0.42□□□□□ -2.34
SMCHD1-206ENST00000581631 KMT2DO14686 5537 aa0.42□□□□□ -2.34
SMCHD1-206ENST00000581631 TRPM7Q96QT4 1865 aa0.41□□□□□ -2.34
SMCHD1-206ENST00000581631 COL24A1Q17RW2 1714 aa0.41□□□□□ -2.34
SMCHD1-206ENST00000581631 SYNE2Q8WXH0 6885 aaKnown RBP0.41□□□□□ -2.34
SMCHD1-206ENST00000581631 KIAA1107Q9UPP5 1409 aa0.41□□□□□ -2.34
SMCHD1-206ENST00000581631 USP54Q70EL1 1684 aa0.41□□□□□ -2.34
SMCHD1-206ENST00000581631 IGKV1D-42A0A075B6H8 117 aa0.41□□□□□ -2.34
SMCHD1-206ENST00000581631 IGKV2D-26A0A0A0MRZ7 120 aa0.41□□□□□ -2.34
SMCHD1-206ENST00000581631 C2orf70A6NJV1 201 aa0.41□□□□□ -2.34
SMCHD1-206ENST00000581631 CLDN25C9JDP6 229 aa0.41□□□□□ -2.34
SMCHD1-206ENST00000581631 E7EQ34 232 aa0.41□□□□□ -2.34
SMCHD1-206ENST00000581631 H3BQV1 296 aa0.41□□□□□ -2.34
SMCHD1-206ENST00000581631 PGRMC1O00264 195 aaKnown RBP0.41□□□□□ -2.34
SMCHD1-206ENST00000581631 GPR31O00270 319 aa0.41□□□□□ -2.34
SMCHD1-206ENST00000581631 CST8O60676 142 aa0.41□□□□□ -2.34
SMCHD1-206ENST00000581631 HIST1H2BKO60814 126 aa0.41□□□□□ -2.34
SMCHD1-206ENST00000581631 TIMM17BO60830 172 aa0.41□□□□□ -2.34
SMCHD1-206ENST00000581631 TRGC2P03986 189 aa0.41□□□□□ -2.34
SMCHD1-206ENST00000581631 CRHP06850 196 aa0.41□□□□□ -2.34
SMCHD1-206ENST00000581631 HIST1H2BJP06899 126 aa0.41□□□□□ -2.34
SMCHD1-206ENST00000581631 OR10J4P0C629 311 aa0.41□□□□□ -2.34
SMCHD1-206ENST00000581631 MGST1P10620 155 aaKnown RBP0.41□□□□□ -2.34
SMCHD1-206ENST00000581631 CRYGAP11844 174 aa0.41□□□□□ -2.34
SMCHD1-206ENST00000581631 NFYBP25208 207 aa0.41□□□□□ -2.34
SMCHD1-206ENST00000581631 RAB5CP51148 216 aa0.41□□□□□ -2.34
SMCHD1-206ENST00000581631 DSCR4P56555 118 aaPredicted RBP0.41□□□□□ -2.34
SMCHD1-206ENST00000581631 TAS2R41P59536 307 aa0.41□□□□□ -2.34
SMCHD1-206ENST00000581631 DEFA1P59665 94 aa0.41□□□□□ -2.34
SMCHD1-206ENST00000581631 DYNLT1P63172 113 aa0.41□□□□□ -2.34
SMCHD1-206ENST00000581631 GNG5P63218 68 aa0.41□□□□□ -2.34
SMCHD1-206ENST00000581631 RTL8BQ17RB0 113 aa0.41□□□□□ -2.34
SMCHD1-206ENST00000581631 DCUN1D2Q6PH85 259 aa0.41□□□□□ -2.34
SMCHD1-206ENST00000581631 TOMM20LQ6UXN7 152 aa0.41□□□□□ -2.34
SMCHD1-206ENST00000581631 C4orf22Q6V702 233 aa0.41□□□□□ -2.34
SMCHD1-206ENST00000581631 SMIM15Q7Z3B0 74 aa0.41□□□□□ -2.34
SMCHD1-206ENST00000581631 LINC00311Q8N616 119 aa0.41□□□□□ -2.34
SMCHD1-206ENST00000581631 C3orf56Q8N813 242 aa0.41□□□□□ -2.34
SMCHD1-206ENST00000581631 PPTC7Q8NI37 304 aa0.41□□□□□ -2.34
SMCHD1-206ENST00000581631 WFDC5Q8TCV5 224 aa0.41□□□□□ -2.34
SMCHD1-206ENST00000581631 ADAT3Q96EY9 351 aaPredicted RBP0.41□□□□□ -2.34
SMCHD1-206ENST00000581631 SELENOSQ9BQE4 189 aa0.41□□□□□ -2.34
SMCHD1-206ENST00000581631 PRADC1Q9BSG0 188 aa0.41□□□□□ -2.34
SMCHD1-206ENST00000581631 DDA1Q9BW61 102 aa0.41□□□□□ -2.34
SMCHD1-206ENST00000581631 NPCDR1Q9BY65 106 aa0.41□□□□□ -2.34
SMCHD1-206ENST00000581631 TMEM126AQ9H061 195 aa0.41□□□□□ -2.34
SMCHD1-206ENST00000581631 PCBD2Q9H0N5 130 aa0.41□□□□□ -2.34
SMCHD1-206ENST00000581631 POPDC3Q9HBV1 291 aa0.41□□□□□ -2.34
SMCHD1-206ENST00000581631 GID8Q9NWU2 228 aa0.41□□□□□ -2.34
SMCHD1-206ENST00000581631 SMPXQ9UHP9 88 aa0.41□□□□□ -2.34
SMCHD1-206ENST00000581631 HSPB8Q9UJY1 196 aa0.41□□□□□ -2.34
SMCHD1-206ENST00000581631 KLK9Q9UKQ9 250 aa0.41□□□□□ -2.34
SMCHD1-206ENST00000581631 LAMTOR2Q9Y2Q5 125 aa0.41□□□□□ -2.34
SMCHD1-206ENST00000581631 UTP11Q9Y3A2 253 aaKnown RBP0.41□□□□□ -2.34
SMCHD1-206ENST00000581631 ARHGEF11O15085 1522 aa0.41□□□□□ -2.34
SMCHD1-206ENST00000581631 LAMB4A4D0S4 1761 aa0.41□□□□□ -2.34
SMCHD1-206ENST00000581631 KIDINS220Q9ULH0 1771 aa0.41□□□□□ -2.34
SMCHD1-206ENST00000581631 PLXNA2O75051 1894 aa0.41□□□□□ -2.34
SMCHD1-206ENST00000581631 CDK5RAP2Q96SN8 1893 aa0.41□□□□□ -2.34
SMCHD1-206ENST00000581631 SPAG17Q6Q759 2223 aa0.41□□□□□ -2.34
SMCHD1-206ENST00000581631 MED12Q93074 2177 aa0.4□□□□□ -2.34
SMCHD1-206ENST00000581631 NEBP20929 6669 aa0.4□□□□□ -2.34
SMCHD1-206ENST00000581631 TRAPPC8Q9Y2L5 1435 aa0.4□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 145.8 ms