RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 MEOX2P50222 304 aa9.12□□□□□ -0.95
CSNK1D-213ENST00000580446 DAZ2Q13117 558 aaKnown RBP9.12□□□□□ -0.95
CSNK1D-213ENST00000580446 C9orf47Q6ZRZ4 202 aa9.12□□□□□ -0.95
CSNK1D-213ENST00000580446 DPH3P1Q9H4G8 78 aa9.12□□□□□ -0.95
CSNK1D-213ENST00000580446 HEYLQ9NQ87 328 aaPredicted RBP9.12□□□□□ -0.95
CSNK1D-213ENST00000580446 MRPL16Q9NX20 251 aaKnown RBP9.12□□□□□ -0.95
CSNK1D-213ENST00000580446 PFDN2Q9UHV9 154 aa9.12□□□□□ -0.95
CSNK1D-213ENST00000580446 PRO0255Q9UI72 69 aa9.12□□□□□ -0.95
CSNK1D-213ENST00000580446 HHLA3Q9XRX5 114 aa9.12□□□□□ -0.95
CSNK1D-213ENST00000580446 IGKV1D-37A0A075B6S9 117 aa9.11□□□□□ -0.95
CSNK1D-213ENST00000580446 IGHV3-38A0A0C4DH36 116 aa9.11□□□□□ -0.95
CSNK1D-213ENST00000580446 ZFP92A6NM28 416 aa9.11□□□□□ -0.95
CSNK1D-213ENST00000580446 RANBP1P43487 201 aa9.11□□□□□ -0.95
CSNK1D-213ENST00000580446 Q8N3U1 123 aa9.11□□□□□ -0.95
CSNK1D-213ENST00000580446 KLF12Q9Y4X4 402 aa9.11□□□□□ -0.95
CSNK1D-213ENST00000580446 TRAV12-3A0A0B4J271 114 aa9.1□□□□□ -0.95
CSNK1D-213ENST00000580446 CD300CQ08708 224 aa9.1□□□□□ -0.95
CSNK1D-213ENST00000580446 FHL2Q14192 279 aa9.1□□□□□ -0.95
CSNK1D-213ENST00000580446 IDNKQ5T6J7 187 aa9.1□□□□□ -0.95
CSNK1D-213ENST00000580446 SAMD13Q5VXD3 122 aa9.1□□□□□ -0.95
CSNK1D-213ENST00000580446 DHRS11Q6UWP2 260 aa9.1□□□□□ -0.95
CSNK1D-213ENST00000580446 CCDC190Q86UF4 302 aa9.1□□□□□ -0.95
CSNK1D-213ENST00000580446 SPARTQ8N0X7 666 aa9.1□□□□□ -0.95
CSNK1D-213ENST00000580446 SLC24A4Q8NFF2 622 aa9.1□□□□□ -0.95
CSNK1D-213ENST00000580446 TMEM37Q8WXS4 190 aa9.1□□□□□ -0.95
CSNK1D-213ENST00000580446 SCAND1P57086 179 aa9.09□□□□□ -0.95
CSNK1D-213ENST00000580446 C2orf83Q53S99 150 aa9.09□□□□□ -0.95
CSNK1D-213ENST00000580446 C11orf72Q8NBR9 251 aa9.09□□□□□ -0.95
CSNK1D-213ENST00000580446 RNASEH2CQ8TDP1 164 aaKnown RBP9.09□□□□□ -0.95
CSNK1D-213ENST00000580446 BLNKQ8WV28 456 aa9.09□□□□□ -0.95
CSNK1D-213ENST00000580446 RHBDL2Q9NX52 303 aa9.09□□□□□ -0.95
CSNK1D-213ENST00000580446 LOC100131303A0A0U1RQF7 123 aa9.08□□□□□ -0.96
CSNK1D-213ENST00000580446 MYL9P24844 172 aa9.08□□□□□ -0.96
CSNK1D-213ENST00000580446 TNFSF8P32971 234 aa9.08□□□□□ -0.96
CSNK1D-213ENST00000580446 ASAH1Q13510 395 aa9.08□□□□□ -0.96
CSNK1D-213ENST00000580446 KLF9Q13886 244 aaPredicted RBP9.08□□□□□ -0.96
CSNK1D-213ENST00000580446 TRAM1Q15629 374 aa9.08□□□□□ -0.96
CSNK1D-213ENST00000580446 OR5H6Q8NGV6 325 aa9.08□□□□□ -0.96
CSNK1D-213ENST00000580446 RRNAD1Q96FB5 475 aaKnown RBP9.08□□□□□ -0.96
CSNK1D-213ENST00000580446 ST6GAL2Q96JF0 529 aa9.08□□□□□ -0.96
CSNK1D-213ENST00000580446 AUNIPQ9H7T9 357 aa9.08□□□□□ -0.96
CSNK1D-213ENST00000580446 IFT46Q9NQC8 304 aa9.08□□□□□ -0.96
CSNK1D-213ENST00000580446 PLCXD1Q9NUJ7 323 aa9.08□□□□□ -0.96
CSNK1D-213ENST00000580446 TRAV1-2A0A0B4J238 106 aa9.07□□□□□ -0.96
CSNK1D-213ENST00000580446 A0A0U1RQV1 116 aa9.07□□□□□ -0.96
CSNK1D-213ENST00000580446 SFTA3P0C7M3 94 aa9.07□□□□□ -0.96
CSNK1D-213ENST00000580446 PI3P19957 117 aa9.07□□□□□ -0.96
CSNK1D-213ENST00000580446 LINC01556Q5JQF7 62 aa9.07□□□□□ -0.96
CSNK1D-213ENST00000580446 C10orf67Q8IYJ2 551 aa9.07□□□□□ -0.96
CSNK1D-213ENST00000580446 SLC25A38Q96DW6 304 aa9.07□□□□□ -0.96
CSNK1D-213ENST00000580446 TP53RKQ96S44 253 aa9.07□□□□□ -0.96
CSNK1D-213ENST00000580446 ACOT13Q9NPJ3 140 aa9.07□□□□□ -0.96
CSNK1D-213ENST00000580446 CACNG5Q9UF02 275 aa9.07□□□□□ -0.96
CSNK1D-213ENST00000580446 RPH3ALQ9UNE2 315 aa9.07□□□□□ -0.96
CSNK1D-213ENST00000580446 LINC00854A0A1B0GVQ3 168 aa9.06□□□□□ -0.96
CSNK1D-213ENST00000580446 SNRPCP09234 159 aaKnown RBP9.06□□□□□ -0.96
CSNK1D-213ENST00000580446 CXCL3P19876 107 aa9.06□□□□□ -0.96
CSNK1D-213ENST00000580446 TRIM16LQ309B1 348 aa9.06□□□□□ -0.96
CSNK1D-213ENST00000580446 ETFRF1Q6IPR1 90 aa9.06□□□□□ -0.96
CSNK1D-213ENST00000580446 OR5H2Q8NGV7 314 aa9.06□□□□□ -0.96
CSNK1D-213ENST00000580446 PCNPQ8WW12 178 aaKnown RBP9.06□□□□□ -0.96
CSNK1D-213ENST00000580446 RPUSD4Q96CM3 377 aaKnown RBP9.06□□□□□ -0.96
CSNK1D-213ENST00000580446 PAXXQ9BUH6 204 aa9.06□□□□□ -0.96
CSNK1D-213ENST00000580446 CEBPZOSA8MTT3 80 aa9.05□□□□□ -0.96
CSNK1D-213ENST00000580446 SNRPGP15A8MWD9 76 aa9.05□□□□□ -0.96
CSNK1D-213ENST00000580446 PRAC2D3DTV9 90 aa9.05□□□□□ -0.96
CSNK1D-213ENST00000580446 PANO1I0J062 215 aa9.05□□□□□ -0.96
CSNK1D-213ENST00000580446 SPINK4O60575 86 aa9.05□□□□□ -0.96
CSNK1D-213ENST00000580446 SPCS3P61009 180 aa9.05□□□□□ -0.96
CSNK1D-213ENST00000580446 SP6Q3SY56 376 aa9.05□□□□□ -0.96
CSNK1D-213ENST00000580446 C22orf42Q6IC83 251 aa9.05□□□□□ -0.96
CSNK1D-213ENST00000580446 C8orf59Q8N0T1 100 aaPredicted RBP9.05□□□□□ -0.96
CSNK1D-213ENST00000580446 RNASE11Q8TAA1 199 aaKnown RBP9.05□□□□□ -0.96
CSNK1D-213ENST00000580446 LINC01600Q96MT4 127 aa9.05□□□□□ -0.96
CSNK1D-213ENST00000580446 TM2D2Q9BX73 214 aa9.05□□□□□ -0.96
CSNK1D-213ENST00000580446 TRGV4A0A0C4DH28 118 aa9.04□□□□□ -0.96
CSNK1D-213ENST00000580446 SCGNO76038 276 aa9.04□□□□□ -0.96
CSNK1D-213ENST00000580446 HRH1P35367 487 aa9.04□□□□□ -0.96
CSNK1D-213ENST00000580446 PPT1P50897 306 aa9.04□□□□□ -0.96
CSNK1D-213ENST00000580446 MORN5Q5VZ52 161 aa9.04□□□□□ -0.96
CSNK1D-213ENST00000580446 DHRSXQ8N5I4 330 aa9.04□□□□□ -0.96
CSNK1D-213ENST00000580446 OR1B1Q8NGR6 318 aa9.04□□□□□ -0.96
CSNK1D-213ENST00000580446 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.04□□□□□ -0.96
CSNK1D-213ENST00000580446 ORM2P19652 201 aa9.03□□□□□ -0.96
CSNK1D-213ENST00000580446 HLA-DMAP28067 261 aa9.03□□□□□ -0.96
CSNK1D-213ENST00000580446 S100GP29377 79 aa9.03□□□□□ -0.96
CSNK1D-213ENST00000580446 MLLT11Q13015 90 aaPredicted RBP9.03□□□□□ -0.96
CSNK1D-213ENST00000580446 ZFP1Q6P2D0 407 aa9.03□□□□□ -0.96
CSNK1D-213ENST00000580446 DNAJC30Q96LL9 226 aa9.03□□□□□ -0.96
CSNK1D-213ENST00000580446 C20orf144Q9BQM9 153 aa9.03□□□□□ -0.96
CSNK1D-213ENST00000580446 MRPL32Q9BYC8 188 aaKnown RBP9.03□□□□□ -0.96
CSNK1D-213ENST00000580446 OR10J3Q5JRS4 329 aa9.02□□□□□ -0.97
CSNK1D-213ENST00000580446 TMEM182Q6ZP80 229 aaPredicted RBP9.02□□□□□ -0.97
CSNK1D-213ENST00000580446 ZNF479Q96JC4 524 aa9.02□□□□□ -0.97
CSNK1D-213ENST00000580446 MGLLQ99685 303 aa9.02□□□□□ -0.97
CSNK1D-213ENST00000580446 VGLL1Q99990 258 aa9.02□□□□□ -0.97
CSNK1D-213ENST00000580446 TP53TG3Q9ULZ0 132 aa9.02□□□□□ -0.97
CSNK1D-213ENST00000580446 TMEM56-RWDD3S4R434 201 aa9.02□□□□□ -0.97
CSNK1D-213ENST00000580446 NOTOA8MTQ0 251 aa9.01□□□□□ -0.97
CSNK1D-213ENST00000580446 PGAM2P15259 253 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms