RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 FAM106CPP0CH98 169 aa10.02□□□□□ -0.81
CDK5RAP3-217ENST00000580287 COMPP49747 757 aaPredicted RBP10.02□□□□□ -0.81
CDK5RAP3-217ENST00000580287 NDPQ00604 133 aa10.02□□□□□ -0.81
CDK5RAP3-217ENST00000580287 C5orf64Q2M2E5 130 aa10.02□□□□□ -0.81
CDK5RAP3-217ENST00000580287 Q8N6K4 173 aa10.02□□□□□ -0.81
CDK5RAP3-217ENST00000580287 GRIFINA4D1Z8 144 aa10.02□□□□□ -0.81
CDK5RAP3-217ENST00000580287 COX7A2P2O60397 106 aa10.02□□□□□ -0.81
CDK5RAP3-217ENST00000580287 NPSP0C0P6 89 aa10.02□□□□□ -0.81
CDK5RAP3-217ENST00000580287 SRSF12Q8WXF0 261 aaKnown RBP10.02□□□□□ -0.81
CDK5RAP3-217ENST00000580287 UHRF2Q96PU4 802 aa10.02□□□□□ -0.81
CDK5RAP3-217ENST00000580287 MRPL36Q9P0J6 103 aaKnown RBP10.02□□□□□ -0.81
CDK5RAP3-217ENST00000580287 GOLT1BQ9Y3E0 138 aa10.02□□□□□ -0.81
CDK5RAP3-217ENST00000580287 TRAV5A0A0B4J249 113 aa10.01□□□□□ -0.81
CDK5RAP3-217ENST00000580287 IGLC7A0M8Q6 106 aa10.01□□□□□ -0.81
CDK5RAP3-217ENST00000580287 LINC01548A6NM66 108 aa10.01□□□□□ -0.81
CDK5RAP3-217ENST00000580287 OR5G3P0C626 314 aa10.01□□□□□ -0.81
CDK5RAP3-217ENST00000580287 BRS3P32247 399 aa10.01□□□□□ -0.81
CDK5RAP3-217ENST00000580287 TAS2R45P59539 299 aa10.01□□□□□ -0.81
CDK5RAP3-217ENST00000580287 SLC35B1P78383 322 aa10.01□□□□□ -0.81
CDK5RAP3-217ENST00000580287 NPBQ8NG41 125 aa10.01□□□□□ -0.81
CDK5RAP3-217ENST00000580287 WFDC12Q8WWY7 111 aa10.01□□□□□ -0.81
CDK5RAP3-217ENST00000580287 SFRP2Q96HF1 295 aa10.01□□□□□ -0.81
CDK5RAP3-217ENST00000580287 TXNDC17Q9BRA2 123 aa10.01□□□□□ -0.81
CDK5RAP3-217ENST00000580287 TEX22C9J3V5 150 aa10.01□□□□□ -0.81
CDK5RAP3-217ENST00000580287 M0QZK8 103 aa10.01□□□□□ -0.81
CDK5RAP3-217ENST00000580287 NDUFA3O95167 84 aa10.01□□□□□ -0.81
CDK5RAP3-217ENST00000580287 CX3CL1P78423 397 aa10.01□□□□□ -0.81
CDK5RAP3-217ENST00000580287 EBI3Q14213 229 aa10.01□□□□□ -0.81
CDK5RAP3-217ENST00000580287 FXYD3Q14802 87 aa10.01□□□□□ -0.81
CDK5RAP3-217ENST00000580287 Q8N9W7 124 aa10.01□□□□□ -0.81
CDK5RAP3-217ENST00000580287 HSPB9Q9BQS6 159 aa10.01□□□□□ -0.81
CDK5RAP3-217ENST00000580287 SLC25A33Q9BSK2 321 aa10.01□□□□□ -0.81
CDK5RAP3-217ENST00000580287 H3BUX3 64 aa10□□□□□ -0.81
CDK5RAP3-217ENST00000580287 PRB4P10163 310 aaPredicted RBP10□□□□□ -0.81
CDK5RAP3-217ENST00000580287 GATA3P23771 443 aa10□□□□□ -0.81
CDK5RAP3-217ENST00000580287 MFAP2P55001 183 aa10□□□□□ -0.81
CDK5RAP3-217ENST00000580287 DEFB112Q30KQ8 113 aa10□□□□□ -0.81
CDK5RAP3-217ENST00000580287 PRR31Q5SQ13 230 aa10□□□□□ -0.81
CDK5RAP3-217ENST00000580287 NHLRC2Q8NBF2 726 aa10□□□□□ -0.81
CDK5RAP3-217ENST00000580287 RNF5Q99942 180 aa10□□□□□ -0.81
CDK5RAP3-217ENST00000580287 DNAJC4Q9NNZ3 241 aa10□□□□□ -0.81
CDK5RAP3-217ENST00000580287 TMEM167BQ9NRX6 74 aa10□□□□□ -0.81
CDK5RAP3-217ENST00000580287 NF1P21359 2839 aa10□□□□□ -0.81
CDK5RAP3-217ENST00000580287 INS-IGF2F8WCM5 200 aa10□□□□□ -0.81
CDK5RAP3-217ENST00000580287 C8orf88P0DMB2 117 aa10□□□□□ -0.81
CDK5RAP3-217ENST00000580287 CD99P14209 185 aa10□□□□□ -0.81
CDK5RAP3-217ENST00000580287 ORM2P19652 201 aa10□□□□□ -0.81
CDK5RAP3-217ENST00000580287 CBLN1P23435 193 aa10□□□□□ -0.81
CDK5RAP3-217ENST00000580287 CRYBB3P26998 211 aa10□□□□□ -0.81
CDK5RAP3-217ENST00000580287 ADMP35318 185 aa10□□□□□ -0.81
CDK5RAP3-217ENST00000580287 TDRG1Q3Y452 100 aa10□□□□□ -0.81
CDK5RAP3-217ENST00000580287 PET117Q6UWS5 81 aa10□□□□□ -0.81
CDK5RAP3-217ENST00000580287 TOMM20LQ6UXN7 152 aa10□□□□□ -0.81
CDK5RAP3-217ENST00000580287 PQLC2Q6ZP29 291 aa10□□□□□ -0.81
CDK5RAP3-217ENST00000580287 CMTM2Q8TAZ6 248 aa10□□□□□ -0.81
CDK5RAP3-217ENST00000580287 ZNF503Q96F45 646 aa10□□□□□ -0.81
CDK5RAP3-217ENST00000580287 SETXQ7Z333 2677 aaKnown RBP9.99□□□□□ -0.81
CDK5RAP3-217ENST00000580287 UBE2L3P68036 154 aaKnown RBP9.99□□□□□ -0.81
CDK5RAP3-217ENST00000580287 GAGE1Q13065 139 aa9.99□□□□□ -0.81
CDK5RAP3-217ENST00000580287 C10orf113Q5VZT2 155 aa9.99□□□□□ -0.81
CDK5RAP3-217ENST00000580287 Q6ZWC4 215 aa9.99□□□□□ -0.81
CDK5RAP3-217ENST00000580287 OR5AU1Q8NGC0 362 aa9.99□□□□□ -0.81
CDK5RAP3-217ENST00000580287 LINC00479Q96M42 142 aa9.99□□□□□ -0.81
CDK5RAP3-217ENST00000580287 SMR3AQ99954 134 aa9.99□□□□□ -0.81
CDK5RAP3-217ENST00000580287 TCRBV4S1A1TA0A5B7 111 aa9.99□□□□□ -0.81
CDK5RAP3-217ENST00000580287 SUMO1P63165 101 aaKnown RBP9.99□□□□□ -0.81
CDK5RAP3-217ENST00000580287 MRPL52Q86TS9 123 aaKnown RBP9.99□□□□□ -0.81
CDK5RAP3-217ENST00000580287 C20orf144Q9BQM9 153 aa9.99□□□□□ -0.81
CDK5RAP3-217ENST00000580287 ZNF355PQ9NSJ1 428 aa9.99□□□□□ -0.81
CDK5RAP3-217ENST00000580287 LINC00527Q9UJ94 153 aa9.99□□□□□ -0.81
CDK5RAP3-217ENST00000580287 TP53TG3Q9ULZ0 132 aa9.99□□□□□ -0.81
CDK5RAP3-217ENST00000580287 PYYP10082 97 aa9.98□□□□□ -0.81
CDK5RAP3-217ENST00000580287 FOXL1Q12952 345 aa9.98□□□□□ -0.81
CDK5RAP3-217ENST00000580287 OR1B1Q8NGR6 318 aa9.98□□□□□ -0.81
CDK5RAP3-217ENST00000580287 FOXC2Q99958 501 aa9.98□□□□□ -0.81
CDK5RAP3-217ENST00000580287 MIEN1Q9BRT3 115 aa9.98□□□□□ -0.81
CDK5RAP3-217ENST00000580287 C19orf24Q9BVV8 132 aa9.98□□□□□ -0.81
CDK5RAP3-217ENST00000580287 RNASE7Q9H1E1 156 aaKnown RBP9.98□□□□□ -0.81
CDK5RAP3-217ENST00000580287 MEGF9Q9H1U4 602 aa9.98□□□□□ -0.81
CDK5RAP3-217ENST00000580287 GSX1Q9H4S2 264 aaPredicted RBP9.98□□□□□ -0.81
CDK5RAP3-217ENST00000580287 IGHV7-81A0A0B4J1V7 117 aa9.98□□□□□ -0.81
CDK5RAP3-217ENST00000580287 IGHV4-59P01825 116 aa9.98□□□□□ -0.81
CDK5RAP3-217ENST00000580287 TCL1AP56279 114 aa9.98□□□□□ -0.81
CDK5RAP3-217ENST00000580287 LINC00310P59036 64 aa9.98□□□□□ -0.81
CDK5RAP3-217ENST00000580287 ETFRF1Q6IPR1 90 aa9.98□□□□□ -0.81
CDK5RAP3-217ENST00000580287 TEX43Q6ZNM6 134 aa9.98□□□□□ -0.81
CDK5RAP3-217ENST00000580287 Q6ZS46 218 aa9.98□□□□□ -0.81
CDK5RAP3-217ENST00000580287 BTF3L4Q96K17 158 aa9.98□□□□□ -0.81
CDK5RAP3-217ENST00000580287 DUX5Q96PT3 197 aa9.98□□□□□ -0.81
CDK5RAP3-217ENST00000580287 IGKV1D-37A0A075B6S9 117 aa9.97□□□□□ -0.81
CDK5RAP3-217ENST00000580287 GGTLC3B5MD39 225 aa9.97□□□□□ -0.81
CDK5RAP3-217ENST00000580287 AMY1AP04745 511 aa9.97□□□□□ -0.81
CDK5RAP3-217ENST00000580287 SGK494Q96LW2 274 aa9.97□□□□□ -0.81
CDK5RAP3-217ENST00000580287 S4R3C0 116 aa9.97□□□□□ -0.81
CDK5RAP3-217ENST00000580287 HELTA6NFD8 242 aa9.97□□□□□ -0.81
CDK5RAP3-217ENST00000580287 F2Z2F3 143 aa9.97□□□□□ -0.81
CDK5RAP3-217ENST00000580287 CA1P00915 261 aaPredicted RBP9.97□□□□□ -0.81
CDK5RAP3-217ENST00000580287 ZNF562Q6V9R5 426 aa9.97□□□□□ -0.81
CDK5RAP3-217ENST00000580287 LINC00305Q7Z4B0 112 aa9.97□□□□□ -0.81
CDK5RAP3-217ENST00000580287 OR1L4Q8NGR5 311 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms