RNA–Protein interactions for RNA: ENST00000580014.1

RNF43-204, Transcript of ring finger protein 43, humanhuman

TSL 3

Gene RNF43, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-204ENST00000580014 PUS1Q9Y606 427 aaKnown RBP eCLIP5.43□□□□□ -1.54
RNF43-204ENST00000580014 TENM1Q9UKZ4 2725 aa5.43□□□□□ -1.54
RNF43-204ENST00000580014 KANTRA0A1W2PQU2 76 aa5.42□□□□□ -1.54
RNF43-204ENST00000580014 TMEM213A2RRL7 107 aa5.42□□□□□ -1.54
RNF43-204ENST00000580014 C17orf112F2Z3M2 114 aa5.42□□□□□ -1.54
RNF43-204ENST00000580014 M0QZ24 198 aa5.42□□□□□ -1.54
RNF43-204ENST00000580014 SEC11BP0C7V7 166 aa5.42□□□□□ -1.54
RNF43-204ENST00000580014 GATA2P23769 480 aaPredicted RBP5.42□□□□□ -1.54
RNF43-204ENST00000580014 USF2Q15853 346 aaPredicted RBP5.42□□□□□ -1.54
RNF43-204ENST00000580014 RPEL1Q2QD12 228 aa5.42□□□□□ -1.54
RNF43-204ENST00000580014 NSUN5P1Q3KNT7 163 aa5.42□□□□□ -1.54
RNF43-204ENST00000580014 MIC13Q5XKP0 118 aa5.42□□□□□ -1.54
RNF43-204ENST00000580014 UNQ9165/PRO28630Q6UXU0 137 aa5.42□□□□□ -1.54
RNF43-204ENST00000580014 PATE2Q6UY27 113 aa5.42□□□□□ -1.54
RNF43-204ENST00000580014 ADAMTSL5Q6ZMM2 481 aa5.42□□□□□ -1.54
RNF43-204ENST00000580014 BAP18Q8IXM2 172 aa5.42□□□□□ -1.54
RNF43-204ENST00000580014 DPF1Q92782 380 aa5.42□□□□□ -1.54
RNF43-204ENST00000580014 DLX4Q92988 240 aaPredicted RBP5.42□□□□□ -1.54
RNF43-204ENST00000580014 MARC2Q969Z3 335 aa5.42□□□□□ -1.54
RNF43-204ENST00000580014 RNF125Q96EQ8 232 aa5.42□□□□□ -1.54
RNF43-204ENST00000580014 RSG1Q9BU20 258 aa5.42□□□□□ -1.54
RNF43-204ENST00000580014 SLC39A9Q9NUM3 307 aa5.42□□□□□ -1.54
RNF43-204ENST00000580014 UFC1Q9Y3C8 167 aa5.42□□□□□ -1.54
RNF43-204ENST00000580014 PXMP4Q9Y6I8 212 aa5.42□□□□□ -1.54
RNF43-204ENST00000580014 CSN3P07498 182 aa5.41□□□□□ -1.54
RNF43-204ENST00000580014 HNRNPCP07910 306 aaKnown RBP eCLIP5.41□□□□□ -1.54
RNF43-204ENST00000580014 TPT1P13693 172 aaKnown RBP5.41□□□□□ -1.54
RNF43-204ENST00000580014 SYNJ2BPP57105 145 aa5.41□□□□□ -1.54
RNF43-204ENST00000580014 B2MP61769 119 aa5.41□□□□□ -1.54
RNF43-204ENST00000580014 ZNF709Q8N972 641 aa5.41□□□□□ -1.54
RNF43-204ENST00000580014 HSD17B11Q8NBQ5 300 aa5.41□□□□□ -1.54
RNF43-204ENST00000580014 OR9G4Q8NGQ1 327 aa5.41□□□□□ -1.54
RNF43-204ENST00000580014 GATAD1Q8WUU5 269 aa5.41□□□□□ -1.54
RNF43-204ENST00000580014 TMEM37Q8WXS4 190 aa5.41□□□□□ -1.54
RNF43-204ENST00000580014 PHYHIPLQ96FC7 376 aa5.41□□□□□ -1.54
RNF43-204ENST00000580014 DUX3Q96PT4 197 aa5.41□□□□□ -1.54
RNF43-204ENST00000580014 ZNF471Q9BX82 626 aaPredicted RBP5.41□□□□□ -1.54
RNF43-204ENST00000580014 VSIRQ9H7M9 311 aa5.41□□□□□ -1.54
RNF43-204ENST00000580014 DNAJC4Q9NNZ3 241 aa5.41□□□□□ -1.54
RNF43-204ENST00000580014 DAZ1Q9NQZ3 744 aaKnown RBP5.41□□□□□ -1.54
RNF43-204ENST00000580014 TECRQ9NZ01 308 aaKnown RBP5.41□□□□□ -1.54
RNF43-204ENST00000580014 SMPXQ9UHP9 88 aa5.41□□□□□ -1.54
RNF43-204ENST00000580014 RFNGQ9Y644 331 aa5.41□□□□□ -1.54
RNF43-204ENST00000580014 STAB1Q9NY15 2570 aa5.4□□□□□ -1.54
RNF43-204ENST00000580014 IGHV3-35A0A0C4DH35 117 aa5.4□□□□□ -1.54
RNF43-204ENST00000580014 IGHV7-4-1A0A0J9YVY3 117 aa5.4□□□□□ -1.54
RNF43-204ENST00000580014 C2orf70A6NJV1 201 aa5.4□□□□□ -1.54
RNF43-204ENST00000580014 SEC14L6B5MCN3 397 aa5.4□□□□□ -1.54
RNF43-204ENST00000580014 H3BRN7 92 aa5.4□□□□□ -1.54
RNF43-204ENST00000580014 OVOL1O14753 267 aa5.4□□□□□ -1.54
RNF43-204ENST00000580014 BUB3O43684 328 aa5.4□□□□□ -1.54
RNF43-204ENST00000580014 HYPMO75409 117 aa5.4□□□□□ -1.54
RNF43-204ENST00000580014 MBP02144 154 aa5.4□□□□□ -1.54
RNF43-204ENST00000580014 IL4P05112 153 aa5.4□□□□□ -1.54
RNF43-204ENST00000580014 OR5G3P0C626 314 aa5.4□□□□□ -1.54
RNF43-204ENST00000580014 CBLN1P23435 193 aa5.4□□□□□ -1.54
RNF43-204ENST00000580014 NPPCP23582 126 aa5.4□□□□□ -1.54
RNF43-204ENST00000580014 C1orf194Q5T5A4 169 aa5.4□□□□□ -1.54
RNF43-204ENST00000580014 Q6ZRG5 221 aa5.4□□□□□ -1.54
RNF43-204ENST00000580014 RPP25LQ8N5L8 163 aaKnown RBP5.4□□□□□ -1.54
RNF43-204ENST00000580014 OR1L4Q8NGR5 311 aa5.4□□□□□ -1.54
RNF43-204ENST00000580014 DAZAP1Q96EP5 407 aaKnown RBP5.4□□□□□ -1.54
RNF43-204ENST00000580014 PFDN5Q99471 154 aa5.4□□□□□ -1.54
RNF43-204ENST00000580014 SHANK2-AS3Q9BTD1 123 aa5.4□□□□□ -1.54
RNF43-204ENST00000580014 KRTAP4-7Q9BYR0 210 aa5.4□□□□□ -1.54
RNF43-204ENST00000580014 SH3BGRL3Q9H299 93 aa5.4□□□□□ -1.54
RNF43-204ENST00000580014 PEMTQ9UBM1 199 aa5.4□□□□□ -1.54
RNF43-204ENST00000580014 UMAD1C9J7I0 102 aa5.39□□□□□ -1.55
RNF43-204ENST00000580014 PRYO14603 147 aa5.39□□□□□ -1.55
RNF43-204ENST00000580014 CHEK1O14757 476 aa5.39□□□□□ -1.55
RNF43-204ENST00000580014 MRPS12O15235 138 aaKnown RBP5.39□□□□□ -1.55
RNF43-204ENST00000580014 M6PRP20645 277 aa5.39□□□□□ -1.55
RNF43-204ENST00000580014 LYZP61626 148 aa5.39□□□□□ -1.55
RNF43-204ENST00000580014 ACOT6Q3I5F7 207 aaPredicted RBP5.39□□□□□ -1.55
RNF43-204ENST00000580014 GCSAMLQ5JQS6 135 aa5.39□□□□□ -1.55
RNF43-204ENST00000580014 FFAR4Q5NUL3 377 aa5.39□□□□□ -1.55
RNF43-204ENST00000580014 C10orf113Q5VZT2 155 aa5.39□□□□□ -1.55
RNF43-204ENST00000580014 IGFL4Q6B9Z1 124 aa5.39□□□□□ -1.55
RNF43-204ENST00000580014 EIF5AL1Q6IS14 154 aaKnown RBP5.39□□□□□ -1.55
RNF43-204ENST00000580014 C16orf54Q6UWD8 224 aa5.39□□□□□ -1.55
RNF43-204ENST00000580014 DPPA3Q6W0C5 159 aa5.39□□□□□ -1.55
RNF43-204ENST00000580014 S100A7AQ86SG5 101 aa5.39□□□□□ -1.55
RNF43-204ENST00000580014 FAM167A-AS1Q96KT0 104 aa5.39□□□□□ -1.55
RNF43-204ENST00000580014 METTL26Q96S19 204 aa5.39□□□□□ -1.55
RNF43-204ENST00000580014 RNF2Q99496 336 aa5.39□□□□□ -1.55
RNF43-204ENST00000580014 SLC25A39Q9BZJ4 359 aaPredicted RBP5.39□□□□□ -1.55
RNF43-204ENST00000580014 RPRMQ9NS64 109 aa5.39□□□□□ -1.55
RNF43-204ENST00000580014 RABAC1Q9UI14 185 aa5.39□□□□□ -1.55
RNF43-204ENST00000580014 RNF24Q9Y225 148 aa5.39□□□□□ -1.55
RNF43-204ENST00000580014 HIGD1AQ9Y241 93 aa5.39□□□□□ -1.55
RNF43-204ENST00000580014 A0A1W2PS18 150 aa5.38□□□□□ -1.55
RNF43-204ENST00000580014 ZNF320A2RRD8 509 aa5.38□□□□□ -1.55
RNF43-204ENST00000580014 ZNF98A6NK75 572 aa5.38□□□□□ -1.55
RNF43-204ENST00000580014 COX7A2P2O60397 106 aa5.38□□□□□ -1.55
RNF43-204ENST00000580014 IGLV1-51P01701 117 aa5.38□□□□□ -1.55
RNF43-204ENST00000580014 APOHP02749 345 aaPredicted RBP5.38□□□□□ -1.55
RNF43-204ENST00000580014 CD5P06127 495 aa5.38□□□□□ -1.55
RNF43-204ENST00000580014 FOLR2P14207 255 aa5.38□□□□□ -1.55
RNF43-204ENST00000580014 ORM2P19652 201 aa5.38□□□□□ -1.55
RNF43-204ENST00000580014 S100A7P31151 101 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms