RNA–Protein interactions for RNA: ENST00000579647.1

CBX3P2-201, Transcript of chromobox 3 pseudogene 2, humanhuman

TSL 2 BASIC

Gene CBX3P2, Length 1,429 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P2-201ENST00000579647 ATP5SQ99766 215 aa12.57□□□□□ -0.4
CBX3P2-201ENST00000579647 NPCDR1Q9BY65 106 aa12.57□□□□□ -0.4
CBX3P2-201ENST00000579647 WDR61Q9GZS3 305 aaKnown RBP12.57□□□□□ -0.4
CBX3P2-201ENST00000579647 DNAJC4Q9NNZ3 241 aa12.57□□□□□ -0.4
CBX3P2-201ENST00000579647 SLC39A9Q9NUM3 307 aa12.57□□□□□ -0.4
CBX3P2-201ENST00000579647 ELOA3CA0A087WX78 387 aaPredicted RBP12.56□□□□□ -0.4
CBX3P2-201ENST00000579647 KNCNA6PVL3 124 aa12.56□□□□□ -0.4
CBX3P2-201ENST00000579647 ASB13Q8WXK3 278 aa12.56□□□□□ -0.4
CBX3P2-201ENST00000579647 GPR82Q96P67 336 aa12.56□□□□□ -0.4
CBX3P2-201ENST00000579647 RCHY1Q96PM5 261 aa12.56□□□□□ -0.4
CBX3P2-201ENST00000579647 SPATA25Q9BR10 227 aa12.56□□□□□ -0.4
CBX3P2-201ENST00000579647 RETNQ9HD89 108 aa12.56□□□□□ -0.4
CBX3P2-201ENST00000579647 SNRPD3P62318 126 aaKnown RBP12.55□□□□□ -0.4
CBX3P2-201ENST00000579647 MORN5Q5VZ52 161 aa12.55□□□□□ -0.4
CBX3P2-201ENST00000579647 OR1L4Q8NGR5 311 aa12.55□□□□□ -0.4
CBX3P2-201ENST00000579647 OR2T35Q8NGX2 323 aa12.55□□□□□ -0.4
CBX3P2-201ENST00000579647 C17orf77Q96MU5 243 aa12.55□□□□□ -0.4
CBX3P2-201ENST00000579647 LINC00052Q96N35 136 aa12.55□□□□□ -0.4
CBX3P2-201ENST00000579647 WFDC1Q9HC57 220 aa12.55□□□□□ -0.4
CBX3P2-201ENST00000579647 SOCS3O14543 225 aa12.54□□□□□ -0.4
CBX3P2-201ENST00000579647 IFNA5P01569 189 aa12.54□□□□□ -0.4
CBX3P2-201ENST00000579647 RPL7P18124 248 aaKnown RBP12.54□□□□□ -0.4
CBX3P2-201ENST00000579647 ID1P41134 155 aa12.54□□□□□ -0.4
CBX3P2-201ENST00000579647 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.54□□□□□ -0.4
CBX3P2-201ENST00000579647 STHQ8IWL8 128 aa12.54□□□□□ -0.4
CBX3P2-201ENST00000579647 ZNF709Q8N972 641 aa12.54□□□□□ -0.4
CBX3P2-201ENST00000579647 SCGB1C1Q8TD33 95 aa12.54□□□□□ -0.4
CBX3P2-201ENST00000579647 SEPSECSQ9HD40 501 aaKnown RBP12.54□□□□□ -0.4
CBX3P2-201ENST00000579647 ATF4P18848 351 aaPredicted RBP12.54□□□□□ -0.4
CBX3P2-201ENST00000579647 APOC4P55056 127 aa12.54□□□□□ -0.4
CBX3P2-201ENST00000579647 C16orf92Q96LL3 132 aa12.54□□□□□ -0.4
CBX3P2-201ENST00000579647 PFDN5Q99471 154 aa12.54□□□□□ -0.4
CBX3P2-201ENST00000579647 FXYD6-FXYD2A0A087WZ82 144 aa12.53□□□□□ -0.4
CBX3P2-201ENST00000579647 TRAV5A0A0B4J249 113 aa12.53□□□□□ -0.4
CBX3P2-201ENST00000579647 SNRPCP09234 159 aaKnown RBP12.53□□□□□ -0.4
CBX3P2-201ENST00000579647 MEOX2P50222 304 aa12.53□□□□□ -0.4
CBX3P2-201ENST00000579647 DEFB1P60022 68 aa12.53□□□□□ -0.4
CBX3P2-201ENST00000579647 GCSAMLQ5JQS6 135 aa12.53□□□□□ -0.4
CBX3P2-201ENST00000579647 ACTL10Q5JWF8 245 aa12.53□□□□□ -0.4
CBX3P2-201ENST00000579647 AQP10Q96PS8 301 aa12.53□□□□□ -0.4
CBX3P2-201ENST00000579647 RNF24Q9Y225 148 aa12.53□□□□□ -0.4
CBX3P2-201ENST00000579647 C17orf112F2Z3M2 114 aa12.52□□□□□ -0.41
CBX3P2-201ENST00000579647 ISLRO14498 428 aa12.52□□□□□ -0.41
CBX3P2-201ENST00000579647 MRPS12O15235 138 aaKnown RBP12.52□□□□□ -0.41
CBX3P2-201ENST00000579647 PSMB3P49720 205 aa12.52□□□□□ -0.41
CBX3P2-201ENST00000579647 IGFL4Q6B9Z1 124 aa12.52□□□□□ -0.41
CBX3P2-201ENST00000579647 GATAD1Q8WUU5 269 aa12.52□□□□□ -0.41
CBX3P2-201ENST00000579647 CSTL1Q9H114 145 aa12.52□□□□□ -0.41
CBX3P2-201ENST00000579647 RFNGQ9Y644 331 aa12.52□□□□□ -0.41
CBX3P2-201ENST00000579647 COL7A1Q02388 2944 aa12.51□□□□□ -0.41
CBX3P2-201ENST00000579647 KIR2DL5BA0A0G2JN68 375 aa12.51□□□□□ -0.41
CBX3P2-201ENST00000579647 KIR2DL5BA0A0G2JPC4 375 aa12.51□□□□□ -0.41
CBX3P2-201ENST00000579647 G3V3Q6 166 aa12.51□□□□□ -0.41
CBX3P2-201ENST00000579647 SMLR1H3BR10 107 aa12.51□□□□□ -0.41
CBX3P2-201ENST00000579647 UBE2CO00762 179 aa12.51□□□□□ -0.41
CBX3P2-201ENST00000579647 BPIFA4PQ86YQ2 179 aa12.51□□□□□ -0.41
CBX3P2-201ENST00000579647 KIR2DL5AQ8N109 375 aa12.51□□□□□ -0.41
CBX3P2-201ENST00000579647 INO80EQ8NBZ0 244 aaPredicted RBP12.51□□□□□ -0.41
CBX3P2-201ENST00000579647 KIR2DL5BQ8NHK3 375 aa12.51□□□□□ -0.41
CBX3P2-201ENST00000579647 C20orf173Q96LM9 149 aa12.51□□□□□ -0.41
CBX3P2-201ENST00000579647 GDF5OSQ5U4N7 250 aa12.5□□□□□ -0.41
CBX3P2-201ENST00000579647 TRPT1Q86TN4 253 aaKnown RBP12.5□□□□□ -0.41
CBX3P2-201ENST00000579647 LRRC20Q8TCA0 184 aa12.5□□□□□ -0.41
CBX3P2-201ENST00000579647 KCNIP2Q9NS61 270 aa12.5□□□□□ -0.41
CBX3P2-201ENST00000579647 TNFSF18Q9UNG2 199 aa12.5□□□□□ -0.41
CBX3P2-201ENST00000579647 HUWE1Q7Z6Z7 4374 aaKnown RBP12.5□□□□□ -0.41
CBX3P2-201ENST00000579647 A0A087X0K7 114 aa12.49□□□□□ -0.41
CBX3P2-201ENST00000579647 TRAV8-2A0A0B4J237 113 aa12.49□□□□□ -0.41
CBX3P2-201ENST00000579647 RNF222A6NCQ9 220 aa12.49□□□□□ -0.41
CBX3P2-201ENST00000579647 H3BTX0 84 aa12.49□□□□□ -0.41
CBX3P2-201ENST00000579647 DEFB135Q30KP9 77 aa12.49□□□□□ -0.41
CBX3P2-201ENST00000579647 FAM78BQ5VT40 261 aa12.49□□□□□ -0.41
CBX3P2-201ENST00000579647 SAMD13Q5VXD3 122 aa12.49□□□□□ -0.41
CBX3P2-201ENST00000579647 OVOL2Q9BRP0 275 aa12.49□□□□□ -0.41
CBX3P2-201ENST00000579647 PARD6GQ9BYG4 376 aaPredicted RBP12.49□□□□□ -0.41
CBX3P2-201ENST00000579647 F6UB75 175 aa12.48□□□□□ -0.41
CBX3P2-201ENST00000579647 HLA-DMBP28068 263 aa12.48□□□□□ -0.41
CBX3P2-201ENST00000579647 FFAR4Q5NUL3 377 aa12.48□□□□□ -0.41
CBX3P2-201ENST00000579647 SPATA31B1PQ5VZV4 182 aa12.48□□□□□ -0.41
CBX3P2-201ENST00000579647 Q6ZWC4 215 aa12.48□□□□□ -0.41
CBX3P2-201ENST00000579647 RNF182Q8N6D2 247 aa12.48□□□□□ -0.41
CBX3P2-201ENST00000579647 RPRMQ9NS64 109 aa12.48□□□□□ -0.41
CBX3P2-201ENST00000579647 AGRNO00468 2067 aa12.48□□□□□ -0.41
CBX3P2-201ENST00000579647 H3BMM0 161 aa12.47□□□□□ -0.41
CBX3P2-201ENST00000579647 SPRY2O43597 315 aa12.47□□□□□ -0.41
CBX3P2-201ENST00000579647 IGKV3-20P01619 116 aa12.47□□□□□ -0.41
CBX3P2-201ENST00000579647 Q6ZNX1 250 aa12.47□□□□□ -0.41
CBX3P2-201ENST00000579647 MIR17HGQ75NE6 70 aa12.47□□□□□ -0.41
CBX3P2-201ENST00000579647 WWC2-AS2Q96NR7 200 aa12.47□□□□□ -0.41
CBX3P2-201ENST00000579647 SAV1Q9H4B6 383 aaPredicted RBP12.47□□□□□ -0.41
CBX3P2-201ENST00000579647 H3BQ15 152 aa12.46□□□□□ -0.41
CBX3P2-201ENST00000579647 CA1P00915 261 aaPredicted RBP12.46□□□□□ -0.41
CBX3P2-201ENST00000579647 HLA-DRB4P13762 266 aa12.46□□□□□ -0.41
CBX3P2-201ENST00000579647 ZNF266Q14584 549 aa12.46□□□□□ -0.41
CBX3P2-201ENST00000579647 FOXI2Q6ZQN5 318 aa12.46□□□□□ -0.41
CBX3P2-201ENST00000579647 RNF183Q96D59 192 aa12.46□□□□□ -0.41
CBX3P2-201ENST00000579647 HLA-DRB4X5D2U9 266 aa12.46□□□□□ -0.41
CBX3P2-201ENST00000579647 ARPC5O15511 151 aa12.45□□□□□ -0.42
CBX3P2-201ENST00000579647 IGLC2P0DOY2 106 aa12.45□□□□□ -0.42
CBX3P2-201ENST00000579647 PRB4P10163 310 aaPredicted RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms