RNA–Protein interactions for RNA: ENST00000579605.5

CDK5RAP3-213, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 560 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-213ENST00000579605 SAV1Q9H4B6 383 aaPredicted RBP9.1□□□□□ -0.95
CDK5RAP3-213ENST00000579605 HSPB7Q9UBY9 170 aa9.1□□□□□ -0.95
CDK5RAP3-213ENST00000579605 SHPKQ9UHJ6 478 aa9.1□□□□□ -0.95
CDK5RAP3-213ENST00000579605 ANKRD20A5PA0PJZ0 165 aa9.09□□□□□ -0.95
CDK5RAP3-213ENST00000579605 GCSHP23434 173 aa9.09□□□□□ -0.95
CDK5RAP3-213ENST00000579605 PSMB3P49720 205 aa9.09□□□□□ -0.95
CDK5RAP3-213ENST00000579605 LYZP61626 148 aa9.09□□□□□ -0.95
CDK5RAP3-213ENST00000579605 SUPT4H1P63272 117 aaKnown RBP9.09□□□□□ -0.95
CDK5RAP3-213ENST00000579605 ZNF90Q03938 601 aa9.09□□□□□ -0.95
CDK5RAP3-213ENST00000579605 OR5I1Q13606 314 aa9.09□□□□□ -0.95
CDK5RAP3-213ENST00000579605 GAMTQ14353 236 aa9.09□□□□□ -0.95
CDK5RAP3-213ENST00000579605 SPCS2Q15005 226 aa9.09□□□□□ -0.95
CDK5RAP3-213ENST00000579605 ESRGQ1W209 222 aa9.09□□□□□ -0.95
CDK5RAP3-213ENST00000579605 C1orf194Q5T5A4 169 aa9.09□□□□□ -0.95
CDK5RAP3-213ENST00000579605 LYZL2Q7Z4W2 148 aa9.09□□□□□ -0.95
CDK5RAP3-213ENST00000579605 OR1S1Q8NH92 325 aa9.09□□□□□ -0.95
CDK5RAP3-213ENST00000579605 MCUBQ9NWR8 336 aa9.09□□□□□ -0.95
CDK5RAP3-213ENST00000579605 TNFRSF18Q9Y5U5 241 aa9.09□□□□□ -0.95
CDK5RAP3-213ENST00000579605 SNRPGP15A8MWD9 76 aa9.08□□□□□ -0.96
CDK5RAP3-213ENST00000579605 F6UB75 175 aa9.08□□□□□ -0.96
CDK5RAP3-213ENST00000579605 SRPXP78539 464 aa9.08□□□□□ -0.96
CDK5RAP3-213ENST00000579605 OR2F1Q13607 317 aa9.08□□□□□ -0.96
CDK5RAP3-213ENST00000579605 FAM78BQ5VT40 261 aa9.08□□□□□ -0.96
CDK5RAP3-213ENST00000579605 SPATA31B1PQ5VZV4 182 aa9.08□□□□□ -0.96
CDK5RAP3-213ENST00000579605 EBLN2Q6P2I7 272 aa9.08□□□□□ -0.96
CDK5RAP3-213ENST00000579605 OR8I2Q8N0Y5 310 aa9.08□□□□□ -0.96
CDK5RAP3-213ENST00000579605 MRPS26Q9BYN8 205 aaKnown RBP9.08□□□□□ -0.96
CDK5RAP3-213ENST00000579605 RSL24D1Q9UHA3 163 aaKnown RBP9.08□□□□□ -0.96
CDK5RAP3-213ENST00000579605 PAIP2BQ9ULR5 123 aaKnown RBP9.08□□□□□ -0.96
CDK5RAP3-213ENST00000579605 IGKV1D-37A0A075B6S9 117 aa9.07□□□□□ -0.96
CDK5RAP3-213ENST00000579605 PIGBOS1A0A0B4J2F0 54 aa9.07□□□□□ -0.96
CDK5RAP3-213ENST00000579605 A0A0J9YY99 117 aa9.07□□□□□ -0.96
CDK5RAP3-213ENST00000579605 CBY3A6NI87 242 aa9.07□□□□□ -0.96
CDK5RAP3-213ENST00000579605 SOCS3O14543 225 aa9.07□□□□□ -0.96
CDK5RAP3-213ENST00000579605 RAB11AP62491 216 aa9.07□□□□□ -0.96
CDK5RAP3-213ENST00000579605 GNPNAT1Q96EK6 184 aaPredicted RBP9.07□□□□□ -0.96
CDK5RAP3-213ENST00000579605 CLUHP3Q96NS8 147 aa9.07□□□□□ -0.96
CDK5RAP3-213ENST00000579605 CCDC59Q9P031 241 aaKnown RBP9.07□□□□□ -0.96
CDK5RAP3-213ENST00000579605 RNF213Q63HN8 5207 aa9.07□□□□□ -0.96
CDK5RAP3-213ENST00000579605 LRP1Q07954 4544 aaKnown RBP9.06□□□□□ -0.96
CDK5RAP3-213ENST00000579605 ISLRO14498 428 aa9.06□□□□□ -0.96
CDK5RAP3-213ENST00000579605 AZU1P20160 251 aa9.06□□□□□ -0.96
CDK5RAP3-213ENST00000579605 SAMD13Q5VXD3 122 aa9.06□□□□□ -0.96
CDK5RAP3-213ENST00000579605 TRGV9Q99603 122 aa9.06□□□□□ -0.96
CDK5RAP3-213ENST00000579605 UPK3BQ9BT76 320 aa9.06□□□□□ -0.96
CDK5RAP3-213ENST00000579605 TRAV26-1A0A087WT03 109 aa9.05□□□□□ -0.96
CDK5RAP3-213ENST00000579605 A0A087WTM6 91 aa9.05□□□□□ -0.96
CDK5RAP3-213ENST00000579605 IAPPP10997 89 aa9.05□□□□□ -0.96
CDK5RAP3-213ENST00000579605 GALR1P47211 349 aa9.05□□□□□ -0.96
CDK5RAP3-213ENST00000579605 PAX9P55771 341 aa9.05□□□□□ -0.96
CDK5RAP3-213ENST00000579605 ZNF79Q15937 498 aa9.05□□□□□ -0.96
CDK5RAP3-213ENST00000579605 TMED4Q7Z7H5 227 aa9.05□□□□□ -0.96
CDK5RAP3-213ENST00000579605 RAB2BQ8WUD1 216 aa9.05□□□□□ -0.96
CDK5RAP3-213ENST00000579605 C16orf92Q96LL3 132 aa9.05□□□□□ -0.96
CDK5RAP3-213ENST00000579605 IGF2BP2-AS1Q96M15 143 aa9.05□□□□□ -0.96
CDK5RAP3-213ENST00000579605 RPRMQ9NS64 109 aa9.05□□□□□ -0.96
CDK5RAP3-213ENST00000579605 MRPS16Q9Y3D3 137 aaKnown RBP9.05□□□□□ -0.96
CDK5RAP3-213ENST00000579605 A0A0J9YX75 114 aa9.04□□□□□ -0.96
CDK5RAP3-213ENST00000579605 DUXBA0A1W2PPF3 345 aa9.04□□□□□ -0.96
CDK5RAP3-213ENST00000579605 FABP12A6NFH5 140 aa9.04□□□□□ -0.96
CDK5RAP3-213ENST00000579605 PITX3O75364 302 aa9.04□□□□□ -0.96
CDK5RAP3-213ENST00000579605 MED6O75586 246 aa9.04□□□□□ -0.96
CDK5RAP3-213ENST00000579605 CFDP00746 253 aaPredicted RBP9.04□□□□□ -0.96
CDK5RAP3-213ENST00000579605 FAUP35544 74 aaKnown RBP9.04□□□□□ -0.96
CDK5RAP3-213ENST00000579605 MEOX2P50222 304 aa9.04□□□□□ -0.96
CDK5RAP3-213ENST00000579605 RPP30P78346 268 aaKnown RBP9.04□□□□□ -0.96
CDK5RAP3-213ENST00000579605 GGNBP1Q5YKI7 109 aa9.04□□□□□ -0.96
CDK5RAP3-213ENST00000579605 THAP8Q8NA92 274 aa9.04□□□□□ -0.96
CDK5RAP3-213ENST00000579605 DYNC2LI1Q8TCX1 351 aa9.04□□□□□ -0.96
CDK5RAP3-213ENST00000579605 DEFB104AQ8WTQ1 72 aa9.04□□□□□ -0.96
CDK5RAP3-213ENST00000579605 SLC25A22Q9H936 323 aa9.04□□□□□ -0.96
CDK5RAP3-213ENST00000579605 PLA2G1BP04054 148 aaKnown RBP9.03□□□□□ -0.96
CDK5RAP3-213ENST00000579605 S100A7P31151 101 aa9.03□□□□□ -0.96
CDK5RAP3-213ENST00000579605 RXFP4Q8TDU9 374 aa9.03□□□□□ -0.96
CDK5RAP3-213ENST00000579605 C20orf173Q96LM9 149 aa9.03□□□□□ -0.96
CDK5RAP3-213ENST00000579605 BCL7BQ9BQE9 202 aa9.03□□□□□ -0.96
CDK5RAP3-213ENST00000579605 RSG1Q9BU20 258 aa9.03□□□□□ -0.96
CDK5RAP3-213ENST00000579605 SLC25A32Q9H2D1 315 aa9.03□□□□□ -0.96
CDK5RAP3-213ENST00000579605 DOK5Q9P104 306 aa9.03□□□□□ -0.96
CDK5RAP3-213ENST00000579605 IGKV1OR2-108A0A075B7D4 117 aa9.02□□□□□ -0.97
CDK5RAP3-213ENST00000579605 ZNF98A6NK75 572 aa9.02□□□□□ -0.97
CDK5RAP3-213ENST00000579605 NOL3O60936 208 aaKnown RBP9.02□□□□□ -0.97
CDK5RAP3-213ENST00000579605 SLC25A6P12236 298 aa9.02□□□□□ -0.97
CDK5RAP3-213ENST00000579605 HTN1P15515 57 aa9.02□□□□□ -0.97
CDK5RAP3-213ENST00000579605 ORM2P19652 201 aa9.02□□□□□ -0.97
CDK5RAP3-213ENST00000579605 VAMP1P23763 118 aa9.02□□□□□ -0.97
CDK5RAP3-213ENST00000579605 TNFSF8P32971 234 aa9.02□□□□□ -0.97
CDK5RAP3-213ENST00000579605 TMBIM6P55061 237 aa9.02□□□□□ -0.97
CDK5RAP3-213ENST00000579605 TMEM128Q5BJH2 165 aa9.02□□□□□ -0.97
CDK5RAP3-213ENST00000579605 BPIFCQ8NFQ6 507 aa9.02□□□□□ -0.97
CDK5RAP3-213ENST00000579605 CIB3Q96Q77 187 aaPredicted RBP9.02□□□□□ -0.97
CDK5RAP3-213ENST00000579605 SOSTQ9BQB4 213 aa9.02□□□□□ -0.97
CDK5RAP3-213ENST00000579605 TMEM147Q9BVK8 224 aa9.02□□□□□ -0.97
CDK5RAP3-213ENST00000579605 SLC45A2Q9UMX9 530 aa9.02□□□□□ -0.97
CDK5RAP3-213ENST00000579605 PLAC8L1A1L4L8 177 aa9.01□□□□□ -0.97
CDK5RAP3-213ENST00000579605 M0R2Z0 102 aa9.01□□□□□ -0.97
CDK5RAP3-213ENST00000579605 WRBO00258 174 aa9.01□□□□□ -0.97
CDK5RAP3-213ENST00000579605 DUSP14O95147 198 aaKnown RBP9.01□□□□□ -0.97
CDK5RAP3-213ENST00000579605 M6PRP20645 277 aa9.01□□□□□ -0.97
CDK5RAP3-213ENST00000579605 AP3S2P59780 193 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms