RNA–Protein interactions for RNA: ENST00000579238.1

CASC3-206, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 517 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-206ENST00000579238 GPR82Q96P67 336 aa5.97□□□□□ -1.45
CASC3-206ENST00000579238 SCGB3A2Q96PL1 93 aa5.97□□□□□ -1.45
CASC3-206ENST00000579238 MIXL1Q9H2W2 232 aa5.97□□□□□ -1.45
CASC3-206ENST00000579238 Q9H8V8 135 aa5.97□□□□□ -1.45
CASC3-206ENST00000579238 DNAH5Q8TE73 4624 aa5.96□□□□□ -1.45
CASC3-206ENST00000579238 TRAV8-2A0A0B4J237 113 aa5.96□□□□□ -1.46
CASC3-206ENST00000579238 PIGBOS1A0A0B4J2F0 54 aa5.96□□□□□ -1.46
CASC3-206ENST00000579238 BOLA2-SMG1P6H3BVE0 249 aa5.96□□□□□ -1.46
CASC3-206ENST00000579238 CTDSPLO15194 276 aa5.96□□□□□ -1.46
CASC3-206ENST00000579238 PITX3O75364 302 aa5.96□□□□□ -1.46
CASC3-206ENST00000579238 ANXA3P12429 323 aa5.96□□□□□ -1.46
CASC3-206ENST00000579238 ORM2P19652 201 aa5.96□□□□□ -1.46
CASC3-206ENST00000579238 TAS2R60P59551 318 aa5.96□□□□□ -1.46
CASC3-206ENST00000579238 CTF1Q16619 201 aa5.96□□□□□ -1.46
CASC3-206ENST00000579238 IGFL4Q6B9Z1 124 aa5.96□□□□□ -1.46
CASC3-206ENST00000579238 CLVS1Q8IUQ0 354 aaPredicted RBP5.96□□□□□ -1.46
CASC3-206ENST00000579238 TMEM256Q8N2U0 113 aa5.96□□□□□ -1.46
CASC3-206ENST00000579238 BPIFCQ8NFQ6 507 aa5.96□□□□□ -1.46
CASC3-206ENST00000579238 C16orf74Q96GX8 76 aa5.96□□□□□ -1.46
CASC3-206ENST00000579238 LINC01587Q99440 93 aa5.96□□□□□ -1.46
CASC3-206ENST00000579238 TMEM147Q9BVK8 224 aa5.96□□□□□ -1.46
CASC3-206ENST00000579238 NAA50Q9GZZ1 169 aaKnown RBP5.96□□□□□ -1.46
CASC3-206ENST00000579238 SCP2D1Q9UJQ7 156 aa5.96□□□□□ -1.46
CASC3-206ENST00000579238 TIMM8BQ9Y5J9 83 aaPredicted RBP5.96□□□□□ -1.46
CASC3-206ENST00000579238 TRAV12-2A0A075B6T6 113 aa5.95□□□□□ -1.46
CASC3-206ENST00000579238 DUXBA0A1W2PPF3 345 aa5.95□□□□□ -1.46
CASC3-206ENST00000579238 ANKRD20A5PA0PJZ0 165 aa5.95□□□□□ -1.46
CASC3-206ENST00000579238 RGS5O15539 181 aa5.95□□□□□ -1.46
CASC3-206ENST00000579238 IAPPP10997 89 aa5.95□□□□□ -1.46
CASC3-206ENST00000579238 BTF3P20290 206 aaKnown RBP5.95□□□□□ -1.46
CASC3-206ENST00000579238 RPP30P78346 268 aaKnown RBP5.95□□□□□ -1.46
CASC3-206ENST00000579238 ZNF493Q6ZR52 646 aa5.95□□□□□ -1.46
CASC3-206ENST00000579238 RNF182Q8N6D2 247 aa5.95□□□□□ -1.46
CASC3-206ENST00000579238 ZNF738Q8NE65 137 aa5.95□□□□□ -1.46
CASC3-206ENST00000579238 OR10J6PQ8NGY7 276 aa5.95□□□□□ -1.46
CASC3-206ENST00000579238 SLC25A39Q9BZJ4 359 aaPredicted RBP5.95□□□□□ -1.46
CASC3-206ENST00000579238 Q9H3A6 140 aa5.95□□□□□ -1.46
CASC3-206ENST00000579238 RABL2AQ9UBK7 228 aaPredicted RBP5.95□□□□□ -1.46
CASC3-206ENST00000579238 PAIP2BQ9ULR5 123 aaKnown RBP5.95□□□□□ -1.46
CASC3-206ENST00000579238 RABL2BQ9UNT1 228 aa5.95□□□□□ -1.46
CASC3-206ENST00000579238 A0A1W2PPQ1 181 aa5.94□□□□□ -1.46
CASC3-206ENST00000579238 PRSS46E5RG02 174 aa5.94□□□□□ -1.46
CASC3-206ENST00000579238 H3BRN7 92 aa5.94□□□□□ -1.46
CASC3-206ENST00000579238 CTDSP2O14595 271 aa5.94□□□□□ -1.46
CASC3-206ENST00000579238 MED6O75586 246 aa5.94□□□□□ -1.46
CASC3-206ENST00000579238 SLC25A6P12236 298 aa5.94□□□□□ -1.46
CASC3-206ENST00000579238 GATA2P23769 480 aaPredicted RBP5.94□□□□□ -1.46
CASC3-206ENST00000579238 KRTAP10-2P60368 255 aa5.94□□□□□ -1.46
CASC3-206ENST00000579238 RHOBP62745 196 aa5.94□□□□□ -1.46
CASC3-206ENST00000579238 HIST1H1AQ02539 215 aaPredicted RBP5.94□□□□□ -1.46
CASC3-206ENST00000579238 FGL1Q08830 312 aa5.94□□□□□ -1.46
CASC3-206ENST00000579238 IL18Q14116 193 aa5.94□□□□□ -1.46
CASC3-206ENST00000579238 TMEM182Q6ZP80 229 aaPredicted RBP5.94□□□□□ -1.46
CASC3-206ENST00000579238 TMEM144Q7Z5S9 345 aa5.94□□□□□ -1.46
CASC3-206ENST00000579238 OR8A1Q8NGG7 326 aa5.94□□□□□ -1.46
CASC3-206ENST00000579238 RNASE8Q8TDE3 154 aaKnown RBP5.94□□□□□ -1.46
CASC3-206ENST00000579238 RXFP4Q8TDU9 374 aa5.94□□□□□ -1.46
CASC3-206ENST00000579238 GNPNAT1Q96EK6 184 aaPredicted RBP5.94□□□□□ -1.46
CASC3-206ENST00000579238 ZNF503Q96F45 646 aa5.94□□□□□ -1.46
CASC3-206ENST00000579238 CIB3Q96Q77 187 aaPredicted RBP5.94□□□□□ -1.46
CASC3-206ENST00000579238 UPK3BQ9BT76 320 aa5.94□□□□□ -1.46
CASC3-206ENST00000579238 KRTAP1-5Q9BYS1 174 aa5.94□□□□□ -1.46
CASC3-206ENST00000579238 NOP10Q9NPE3 64 aaKnown RBP5.94□□□□□ -1.46
CASC3-206ENST00000579238 PPP1R14DQ9NXH3 145 aa5.94□□□□□ -1.46
CASC3-206ENST00000579238 TRAV26-1A0A087WT03 109 aa5.93□□□□□ -1.46
CASC3-206ENST00000579238 HTN1P15515 57 aa5.93□□□□□ -1.46
CASC3-206ENST00000579238 RPL7P18124 248 aaKnown RBP5.93□□□□□ -1.46
CASC3-206ENST00000579238 M6PRP20645 277 aa5.93□□□□□ -1.46
CASC3-206ENST00000579238 AKR1C1Q04828 323 aa5.93□□□□□ -1.46
CASC3-206ENST00000579238 OR5I1Q13606 314 aa5.93□□□□□ -1.46
CASC3-206ENST00000579238 TMEM263Q8WUH6 116 aaKnown RBP5.93□□□□□ -1.46
CASC3-206ENST00000579238 DIRAS2Q96HU8 199 aa5.93□□□□□ -1.46
CASC3-206ENST00000579238 SHANK2-AS3Q9BTD1 123 aa5.93□□□□□ -1.46
CASC3-206ENST00000579238 MCUBQ9NWR8 336 aa5.93□□□□□ -1.46
CASC3-206ENST00000579238 A0A087X0K7 114 aa5.92□□□□□ -1.46
CASC3-206ENST00000579238 EPM2AB3EWF7 344 aa5.92□□□□□ -1.46
CASC3-206ENST00000579238 H3BNG1 76 aa5.92□□□□□ -1.46
CASC3-206ENST00000579238 H7BYZ3 331 aa5.92□□□□□ -1.46
CASC3-206ENST00000579238 ZNF701M0R085 212 aaPredicted RBP5.92□□□□□ -1.46
CASC3-206ENST00000579238 WRBO00258 174 aa5.92□□□□□ -1.46
CASC3-206ENST00000579238 SYNGR2O43760 224 aa5.92□□□□□ -1.46
CASC3-206ENST00000579238 ADAP1O75689 374 aa5.92□□□□□ -1.46
CASC3-206ENST00000579238 CXCL3P19876 107 aa5.92□□□□□ -1.46
CASC3-206ENST00000579238 CDKN1BP46527 198 aa5.92□□□□□ -1.46
CASC3-206ENST00000579238 PLP1P60201 277 aa5.92□□□□□ -1.46
CASC3-206ENST00000579238 RAP2BP61225 183 aa5.92□□□□□ -1.46
CASC3-206ENST00000579238 PSG3Q16557 428 aa5.92□□□□□ -1.46
CASC3-206ENST00000579238 ESRGQ1W209 222 aa5.92□□□□□ -1.46
CASC3-206ENST00000579238 SPANXN5Q5MJ07 72 aa5.92□□□□□ -1.46
CASC3-206ENST00000579238 CYP2G1PQ6ZSU1 146 aa5.92□□□□□ -1.46
CASC3-206ENST00000579238 LINC00612Q8N6U2 182 aa5.92□□□□□ -1.46
CASC3-206ENST00000579238 LRTM2Q8N967 370 aa5.92□□□□□ -1.46
CASC3-206ENST00000579238 UHRF2Q96PU4 802 aa5.92□□□□□ -1.46
CASC3-206ENST00000579238 C20orf144Q9BQM9 153 aa5.92□□□□□ -1.46
CASC3-206ENST00000579238 HIGD1AQ9Y241 93 aa5.92□□□□□ -1.46
CASC3-206ENST00000579238 MRPS16Q9Y3D3 137 aaKnown RBP5.92□□□□□ -1.46
CASC3-206ENST00000579238 A0A0J9YY99 117 aa5.91□□□□□ -1.46
CASC3-206ENST00000579238 HYPMO75409 117 aa5.91□□□□□ -1.46
CASC3-206ENST00000579238 IL5P05113 134 aa5.91□□□□□ -1.46
CASC3-206ENST00000579238 TMEM128Q5BJH2 165 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms