RNA–Protein interactions for RNA: ENST00000579211.1

ITGB4-205, Transcript of integrin subunit beta 4, humanhuman

TSL 2

Gene ITGB4, Length 411 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-205ENST00000579211 TMEM41BQ5BJD5 291 aa12.84□□□□□ -0.35
ITGB4-205ENST00000579211 TRPT1Q86TN4 253 aaKnown RBP12.84□□□□□ -0.35
ITGB4-205ENST00000579211 UHRF2Q96PU4 802 aa12.84□□□□□ -0.35
ITGB4-205ENST00000579211 SHANK2-AS3Q9BTD1 123 aa12.84□□□□□ -0.35
ITGB4-205ENST00000579211 SCRT1Q9BWW7 348 aa12.84□□□□□ -0.35
ITGB4-205ENST00000579211 ARV1Q9H2C2 271 aa12.84□□□□□ -0.35
ITGB4-205ENST00000579211 DNAH7Q8WXX0 4024 aa12.84□□□□□ -0.35
ITGB4-205ENST00000579211 UBE2L5PA0A1B0GUS4 154 aa12.83□□□□□ -0.36
ITGB4-205ENST00000579211 H3BRN7 92 aa12.83□□□□□ -0.36
ITGB4-205ENST00000579211 ISLRO14498 428 aa12.83□□□□□ -0.36
ITGB4-205ENST00000579211 PTTG1O95997 202 aa12.83□□□□□ -0.36
ITGB4-205ENST00000579211 OR11H2Q8NH07 326 aa12.83□□□□□ -0.36
ITGB4-205ENST00000579211 LRRC20Q8TCA0 184 aa12.83□□□□□ -0.36
ITGB4-205ENST00000579211 MGST2Q99735 147 aa12.83□□□□□ -0.36
ITGB4-205ENST00000579211 PET100P0DJ07 73 aa12.82□□□□□ -0.36
ITGB4-205ENST00000579211 C10orf113Q5VZT2 155 aa12.82□□□□□ -0.36
ITGB4-205ENST00000579211 EBLN2Q6P2I7 272 aa12.82□□□□□ -0.36
ITGB4-205ENST00000579211 LINC00305Q7Z4B0 112 aa12.82□□□□□ -0.36
ITGB4-205ENST00000579211 RPRMQ9NS64 109 aa12.82□□□□□ -0.36
ITGB4-205ENST00000579211 OR5AC2Q9NZP5 309 aa12.82□□□□□ -0.36
ITGB4-205ENST00000579211 TENM2Q9NT68 2774 aa12.82□□□□□ -0.36
ITGB4-205ENST00000579211 ELOA3CA0A087WX78 387 aaPredicted RBP12.81□□□□□ -0.36
ITGB4-205ENST00000579211 IGKV3-20P01619 116 aa12.81□□□□□ -0.36
ITGB4-205ENST00000579211 FGF7P21781 194 aa12.81□□□□□ -0.36
ITGB4-205ENST00000579211 H2BFSP57053 126 aa12.81□□□□□ -0.36
ITGB4-205ENST00000579211 NHLH2Q02577 135 aa12.81□□□□□ -0.36
ITGB4-205ENST00000579211 OR4B1Q8NGF8 309 aa12.81□□□□□ -0.36
ITGB4-205ENST00000579211 OR1L4Q8NGR5 311 aa12.81□□□□□ -0.36
ITGB4-205ENST00000579211 PPP1R1CQ8WVI7 109 aa12.81□□□□□ -0.36
ITGB4-205ENST00000579211 C1QTNF4Q9BXJ3 329 aa12.81□□□□□ -0.36
ITGB4-205ENST00000579211 WDR83OSQ9Y284 106 aa12.81□□□□□ -0.36
ITGB4-205ENST00000579211 H3BMM0 161 aa12.8□□□□□ -0.36
ITGB4-205ENST00000579211 HLA-DRB4P13762 266 aa12.8□□□□□ -0.36
ITGB4-205ENST00000579211 EWSR1Q01844 656 aaKnown RBP eCLIP12.8□□□□□ -0.36
ITGB4-205ENST00000579211 MIC13Q5XKP0 118 aa12.8□□□□□ -0.36
ITGB4-205ENST00000579211 PATE2Q6UY27 113 aa12.8□□□□□ -0.36
ITGB4-205ENST00000579211 FOXI2Q6ZQN5 318 aa12.8□□□□□ -0.36
ITGB4-205ENST00000579211 OR5C1Q8NGR4 320 aa12.8□□□□□ -0.36
ITGB4-205ENST00000579211 PFDN5Q99471 154 aa12.8□□□□□ -0.36
ITGB4-205ENST00000579211 SAV1Q9H4B6 383 aaPredicted RBP12.8□□□□□ -0.36
ITGB4-205ENST00000579211 DNAJC4Q9NNZ3 241 aa12.8□□□□□ -0.36
ITGB4-205ENST00000579211 ALG5Q9Y673 324 aa12.8□□□□□ -0.36
ITGB4-205ENST00000579211 HLA-DRB4X5D2U9 266 aa12.8□□□□□ -0.36
ITGB4-205ENST00000579211 SOCS3O14543 225 aa12.79□□□□□ -0.36
ITGB4-205ENST00000579211 MPDU1O75352 247 aa12.79□□□□□ -0.36
ITGB4-205ENST00000579211 VWC2Q2TAL6 325 aa12.79□□□□□ -0.36
ITGB4-205ENST00000579211 SPATA31B1PQ5VZV4 182 aa12.79□□□□□ -0.36
ITGB4-205ENST00000579211 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.79□□□□□ -0.36
ITGB4-205ENST00000579211 CLEC5AQ9NY25 188 aa12.79□□□□□ -0.36
ITGB4-205ENST00000579211 MPC2O95563 127 aa12.78□□□□□ -0.36
ITGB4-205ENST00000579211 DEFB1P60022 68 aa12.78□□□□□ -0.36
ITGB4-205ENST00000579211 CLINT1Q14677 625 aa12.78□□□□□ -0.36
ITGB4-205ENST00000579211 GDF5OSQ5U4N7 250 aa12.78□□□□□ -0.36
ITGB4-205ENST00000579211 BPIFA4PQ86YQ2 179 aa12.78□□□□□ -0.36
ITGB4-205ENST00000579211 MED28Q9H204 178 aa12.78□□□□□ -0.36
ITGB4-205ENST00000579211 XCL2Q9UBD3 114 aa12.78□□□□□ -0.36
ITGB4-205ENST00000579211 CXorf65A6NEN9 183 aa12.77□□□□□ -0.37
ITGB4-205ENST00000579211 H0YIZ8 118 aa12.77□□□□□ -0.37
ITGB4-205ENST00000579211 C4BPBP20851 252 aa12.77□□□□□ -0.37
ITGB4-205ENST00000579211 RPL29P47914 159 aaKnown RBP12.77□□□□□ -0.37
ITGB4-205ENST00000579211 B2MP61769 119 aa12.77□□□□□ -0.37
ITGB4-205ENST00000579211 PMS2P11Q13670 270 aa12.77□□□□□ -0.37
ITGB4-205ENST00000579211 IGFL4Q6B9Z1 124 aa12.77□□□□□ -0.37
ITGB4-205ENST00000579211 ZNF709Q8N972 641 aa12.77□□□□□ -0.37
ITGB4-205ENST00000579211 TMEM37Q8WXS4 190 aa12.77□□□□□ -0.37
ITGB4-205ENST00000579211 SLC39A9Q9NUM3 307 aa12.77□□□□□ -0.37
ITGB4-205ENST00000579211 PXMP4Q9Y6I8 212 aa12.77□□□□□ -0.37
ITGB4-205ENST00000579211 F6UB75 175 aa12.76□□□□□ -0.37
ITGB4-205ENST00000579211 FXYD7P58549 80 aa12.76□□□□□ -0.37
ITGB4-205ENST00000579211 OPCMLQ14982 345 aa12.76□□□□□ -0.37
ITGB4-205ENST00000579211 ZNF738Q8NE65 137 aa12.76□□□□□ -0.37
ITGB4-205ENST00000579211 THAP6Q8TBB0 222 aa12.76□□□□□ -0.37
ITGB4-205ENST00000579211 C20orf173Q96LM9 149 aa12.76□□□□□ -0.37
ITGB4-205ENST00000579211 PRR20EP86478 221 aa12.75□□□□□ -0.37
ITGB4-205ENST00000579211 PRR20CP86479 221 aa12.75□□□□□ -0.37
ITGB4-205ENST00000579211 PRR20DP86480 221 aa12.75□□□□□ -0.37
ITGB4-205ENST00000579211 PRR20BP86481 221 aa12.75□□□□□ -0.37
ITGB4-205ENST00000579211 PRR20AP86496 221 aa12.75□□□□□ -0.37
ITGB4-205ENST00000579211 PSG9Q00887 426 aa12.75□□□□□ -0.37
ITGB4-205ENST00000579211 FAM78BQ5VT40 261 aa12.75□□□□□ -0.37
ITGB4-205ENST00000579211 CSMD3Q7Z407 3707 aa12.75□□□□□ -0.37
ITGB4-205ENST00000579211 RNF182Q8N6D2 247 aa12.75□□□□□ -0.37
ITGB4-205ENST00000579211 NPCDR1Q9BY65 106 aa12.75□□□□□ -0.37
ITGB4-205ENST00000579211 A0A087X0K7 114 aa12.74□□□□□ -0.37
ITGB4-205ENST00000579211 A0A0J9YX75 114 aa12.74□□□□□ -0.37
ITGB4-205ENST00000579211 C17orf112F2Z3M2 114 aa12.74□□□□□ -0.37
ITGB4-205ENST00000579211 DEFB4AO15263 64 aa12.74□□□□□ -0.37
ITGB4-205ENST00000579211 DUSP14O95147 198 aaKnown RBP12.74□□□□□ -0.37
ITGB4-205ENST00000579211 SNRPCP09234 159 aaKnown RBP12.74□□□□□ -0.37
ITGB4-205ENST00000579211 GIG44P09565 113 aaPredicted RBP12.74□□□□□ -0.37
ITGB4-205ENST00000579211 RPL12P30050 165 aaKnown RBP12.74□□□□□ -0.37
ITGB4-205ENST00000579211 RGS21Q2M5E4 152 aa12.74□□□□□ -0.37
ITGB4-205ENST00000579211 LCN15Q6UWW0 184 aa12.74□□□□□ -0.37
ITGB4-205ENST00000579211 RNF126Q9BV68 326 aa12.74□□□□□ -0.37
ITGB4-205ENST00000579211 KCNIP2Q9NS61 270 aa12.74□□□□□ -0.37
ITGB4-205ENST00000579211 PPP1R14DQ9NXH3 145 aa12.74□□□□□ -0.37
ITGB4-205ENST00000579211 MBD2Q9UBB5 411 aa12.74□□□□□ -0.37
ITGB4-205ENST00000579211 IFNA5P01569 189 aa12.73□□□□□ -0.37
ITGB4-205ENST00000579211 MIFP14174 115 aa12.73□□□□□ -0.37
ITGB4-205ENST00000579211 C11orf45Q8TAV5 145 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 279.6 ms