RNA–Protein interactions for RNA: ENST00000578996.1

CDK5RAP3-211, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 566 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-211ENST00000578996 OXA1LQ15070 435 aa6.59□□□□□ -1.35
CDK5RAP3-211ENST00000578996 IGFL4Q6B9Z1 124 aa6.59□□□□□ -1.35
CDK5RAP3-211ENST00000578996 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.59□□□□□ -1.35
CDK5RAP3-211ENST00000578996 Q6ZNX1 250 aa6.59□□□□□ -1.35
CDK5RAP3-211ENST00000578996 TMEM182Q6ZP80 229 aaPredicted RBP6.59□□□□□ -1.35
CDK5RAP3-211ENST00000578996 DEDD2Q8WXF8 326 aa6.59□□□□□ -1.35
CDK5RAP3-211ENST00000578996 SDHCQ99643 169 aaPredicted RBP6.59□□□□□ -1.35
CDK5RAP3-211ENST00000578996 NIPSNAP3BQ9BS92 247 aa6.59□□□□□ -1.35
CDK5RAP3-211ENST00000578996 SRRQ9GZT4 340 aa6.59□□□□□ -1.35
CDK5RAP3-211ENST00000578996 PSENENQ9NZ42 101 aa6.59□□□□□ -1.35
CDK5RAP3-211ENST00000578996 PLA2G2EQ9NZK7 142 aa6.59□□□□□ -1.35
CDK5RAP3-211ENST00000578996 FLVCR2Q9UPI3 526 aa6.59□□□□□ -1.35
CDK5RAP3-211ENST00000578996 TEX48A0A1B0GUV7 120 aa6.58□□□□□ -1.36
CDK5RAP3-211ENST00000578996 PTTG1O95997 202 aa6.58□□□□□ -1.36
CDK5RAP3-211ENST00000578996 IFNA21P01568 189 aa6.58□□□□□ -1.36
CDK5RAP3-211ENST00000578996 IL5P05113 134 aa6.58□□□□□ -1.36
CDK5RAP3-211ENST00000578996 OR5G3P0C626 314 aa6.58□□□□□ -1.36
CDK5RAP3-211ENST00000578996 PAX9P55771 341 aa6.58□□□□□ -1.36
CDK5RAP3-211ENST00000578996 DEFA1P59665 94 aa6.58□□□□□ -1.36
CDK5RAP3-211ENST00000578996 DEFA3P59666 94 aa6.58□□□□□ -1.36
CDK5RAP3-211ENST00000578996 RAP2BP61225 183 aa6.58□□□□□ -1.36
CDK5RAP3-211ENST00000578996 SPINK13Q1W4C9 94 aa6.58□□□□□ -1.36
CDK5RAP3-211ENST00000578996 RRN3P1Q2M238 152 aa6.58□□□□□ -1.36
CDK5RAP3-211ENST00000578996 C4orf46Q504U0 113 aa6.58□□□□□ -1.36
CDK5RAP3-211ENST00000578996 CYP2G1PQ6ZSU1 146 aa6.58□□□□□ -1.36
CDK5RAP3-211ENST00000578996 C1orf158Q8N1D5 194 aa6.58□□□□□ -1.36
CDK5RAP3-211ENST00000578996 RNF182Q8N6D2 247 aa6.58□□□□□ -1.36
CDK5RAP3-211ENST00000578996 POM121L12Q8N7R1 296 aa6.58□□□□□ -1.36
CDK5RAP3-211ENST00000578996 GPR82Q96P67 336 aa6.58□□□□□ -1.36
CDK5RAP3-211ENST00000578996 DKK2Q9UBU2 259 aa6.58□□□□□ -1.36
CDK5RAP3-211ENST00000578996 SLC45A2Q9UMX9 530 aa6.58□□□□□ -1.36
CDK5RAP3-211ENST00000578996 YTHDF2Q9Y5A9 579 aaKnown RBP6.58□□□□□ -1.36
CDK5RAP3-211ENST00000578996 DNAH6Q9C0G6 4158 aa6.58□□□□□ -1.36
CDK5RAP3-211ENST00000578996 IGLV2-18A0A075B6J9 118 aa6.57□□□□□ -1.36
CDK5RAP3-211ENST00000578996 NAP1L6A6NFF2 107 aa6.57□□□□□ -1.36
CDK5RAP3-211ENST00000578996 H3BRN7 92 aa6.57□□□□□ -1.36
CDK5RAP3-211ENST00000578996 M0R2Z0 102 aa6.57□□□□□ -1.36
CDK5RAP3-211ENST00000578996 CCNKO75909 580 aa6.57□□□□□ -1.36
CDK5RAP3-211ENST00000578996 OR4E1P0C645 316 aa6.57□□□□□ -1.36
CDK5RAP3-211ENST00000578996 METTL15P1P0C7V9 234 aa6.57□□□□□ -1.36
CDK5RAP3-211ENST00000578996 LINC00869P0C866 280 aa6.57□□□□□ -1.36
CDK5RAP3-211ENST00000578996 PRB4P10163 310 aaPredicted RBP6.57□□□□□ -1.36
CDK5RAP3-211ENST00000578996 CNN1P51911 297 aaKnown RBP6.57□□□□□ -1.36
CDK5RAP3-211ENST00000578996 UBE2MP61081 183 aaKnown RBP6.57□□□□□ -1.36
CDK5RAP3-211ENST00000578996 DAD1P61803 113 aa6.57□□□□□ -1.36
CDK5RAP3-211ENST00000578996 BAK1Q16611 211 aa6.57□□□□□ -1.36
CDK5RAP3-211ENST00000578996 TMEM144Q7Z5S9 345 aa6.57□□□□□ -1.36
CDK5RAP3-211ENST00000578996 ZNF738Q8NE65 137 aa6.57□□□□□ -1.36
CDK5RAP3-211ENST00000578996 OR4D5Q8NGN0 318 aa6.57□□□□□ -1.36
CDK5RAP3-211ENST00000578996 LRRC20Q8TCA0 184 aa6.57□□□□□ -1.36
CDK5RAP3-211ENST00000578996 CLUHP3Q96NS8 147 aa6.57□□□□□ -1.36
CDK5RAP3-211ENST00000578996 SLC25A39Q9BZJ4 359 aaPredicted RBP6.57□□□□□ -1.36
CDK5RAP3-211ENST00000578996 HIGD1AQ9Y241 93 aa6.57□□□□□ -1.36
CDK5RAP3-211ENST00000578996 DNAH2Q9P225 4427 aa6.56□□□□□ -1.36
CDK5RAP3-211ENST00000578996 CENPXA8MT69 81 aa6.56□□□□□ -1.36
CDK5RAP3-211ENST00000578996 ZNF705GA8MUZ8 300 aaPredicted RBP6.56□□□□□ -1.36
CDK5RAP3-211ENST00000578996 HYPMO75409 117 aa6.56□□□□□ -1.36
CDK5RAP3-211ENST00000578996 NDUFB6O95139 128 aa6.56□□□□□ -1.36
CDK5RAP3-211ENST00000578996 DUSP14O95147 198 aaKnown RBP6.56□□□□□ -1.36
CDK5RAP3-211ENST00000578996 INSP01308 110 aa6.56□□□□□ -1.36
CDK5RAP3-211ENST00000578996 PRM2P04554 102 aa6.56□□□□□ -1.36
CDK5RAP3-211ENST00000578996 IL7P13232 177 aa6.56□□□□□ -1.36
CDK5RAP3-211ENST00000578996 ANXA7P20073 488 aaKnown RBP6.56□□□□□ -1.36
CDK5RAP3-211ENST00000578996 RHOBP62745 196 aa6.56□□□□□ -1.36
CDK5RAP3-211ENST00000578996 ID3Q02535 119 aa6.56□□□□□ -1.36
CDK5RAP3-211ENST00000578996 ASAH1Q13510 395 aa6.56□□□□□ -1.36
CDK5RAP3-211ENST00000578996 LINC00336Q6ZUF6 198 aa6.56□□□□□ -1.36
CDK5RAP3-211ENST00000578996 BAP18Q8IXM2 172 aa6.56□□□□□ -1.36
CDK5RAP3-211ENST00000578996 OR11H7Q8NGC8 314 aa6.56□□□□□ -1.36
CDK5RAP3-211ENST00000578996 OR10P1Q8NGE3 313 aa6.56□□□□□ -1.36
CDK5RAP3-211ENST00000578996 IGF2BP2-AS1Q96M15 143 aa6.56□□□□□ -1.36
CDK5RAP3-211ENST00000578996 C17orf77Q96MU5 243 aa6.56□□□□□ -1.36
CDK5RAP3-211ENST00000578996 UHRF2Q96PU4 802 aa6.56□□□□□ -1.36
CDK5RAP3-211ENST00000578996 ARL6Q9H0F7 186 aa6.56□□□□□ -1.36
CDK5RAP3-211ENST00000578996 PPP1R14DQ9NXH3 145 aa6.56□□□□□ -1.36
CDK5RAP3-211ENST00000578996 GSKIPQ9P0R6 139 aa6.56□□□□□ -1.36
CDK5RAP3-211ENST00000578996 MGAT4CQ9UBM8 478 aa6.56□□□□□ -1.36
CDK5RAP3-211ENST00000578996 TRAV12-2A0A075B6T6 113 aa6.55□□□□□ -1.36
CDK5RAP3-211ENST00000578996 TRAV8-2A0A0B4J237 113 aa6.55□□□□□ -1.36
CDK5RAP3-211ENST00000578996 PRSS29PA6NIE9 313 aa6.55□□□□□ -1.36
CDK5RAP3-211ENST00000578996 RPL7P18124 248 aaKnown RBP6.55□□□□□ -1.36
CDK5RAP3-211ENST00000578996 DLK1P80370 383 aa6.55□□□□□ -1.36
CDK5RAP3-211ENST00000578996 HIST1H1AQ02539 215 aaPredicted RBP6.55□□□□□ -1.36
CDK5RAP3-211ENST00000578996 SLC38A11Q08AI6 406 aa6.55□□□□□ -1.36
CDK5RAP3-211ENST00000578996 IAH1Q2TAA2 248 aaPredicted RBP6.55□□□□□ -1.36
CDK5RAP3-211ENST00000578996 TMEM88Q6PEY1 159 aa6.55□□□□□ -1.36
CDK5RAP3-211ENST00000578996 AMTNQ6UX39 209 aa6.55□□□□□ -1.36
CDK5RAP3-211ENST00000578996 SHANK2-AS3Q9BTD1 123 aa6.55□□□□□ -1.36
CDK5RAP3-211ENST00000578996 PMS2P5A8MQ11 134 aa6.54□□□□□ -1.36
CDK5RAP3-211ENST00000578996 BOLA2-SMG1P6H3BVE0 249 aa6.54□□□□□ -1.36
CDK5RAP3-211ENST00000578996 CCSO14618 274 aa6.54□□□□□ -1.36
CDK5RAP3-211ENST00000578996 GOSR2O14653 212 aa6.54□□□□□ -1.36
CDK5RAP3-211ENST00000578996 SNRPCP09234 159 aaKnown RBP6.54□□□□□ -1.36
CDK5RAP3-211ENST00000578996 DEFB130BP0DP73 79 aa6.54□□□□□ -1.36
CDK5RAP3-211ENST00000578996 DEFB130AP0DP74 79 aa6.54□□□□□ -1.36
CDK5RAP3-211ENST00000578996 HTN1P15515 57 aa6.54□□□□□ -1.36
CDK5RAP3-211ENST00000578996 SELENOTP62341 195 aa6.54□□□□□ -1.36
CDK5RAP3-211ENST00000578996 TEPPQ6URK8 271 aa6.54□□□□□ -1.36
CDK5RAP3-211ENST00000578996 S100A7AQ86SG5 101 aa6.54□□□□□ -1.36
CDK5RAP3-211ENST00000578996 SMIM8Q96KF7 97 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms