RNA–Protein interactions for RNA: ENST00000578896.1

GGA3-207, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-207ENST00000578896 CNN1P51911 297 aaKnown RBP6.32□□□□□ -1.4
GGA3-207ENST00000578896 ATP5IP56385 69 aaPredicted RBP6.32□□□□□ -1.4
GGA3-207ENST00000578896 DAD1P61803 113 aa6.32□□□□□ -1.4
GGA3-207ENST00000578896 AKR1C1Q04828 323 aa6.32□□□□□ -1.4
GGA3-207ENST00000578896 RRN3P1Q2M238 152 aa6.32□□□□□ -1.4
GGA3-207ENST00000578896 LGALS9BQ3B8N2 356 aa6.32□□□□□ -1.4
GGA3-207ENST00000578896 ACOT7LQ6ZUV0 252 aa6.32□□□□□ -1.4
GGA3-207ENST00000578896 ZNF575Q86XF7 245 aa6.32□□□□□ -1.4
GGA3-207ENST00000578896 BAP18Q8IXM2 172 aa6.32□□□□□ -1.4
GGA3-207ENST00000578896 OR11H7Q8NGC8 314 aa6.32□□□□□ -1.4
GGA3-207ENST00000578896 CLUHP3Q96NS8 147 aa6.32□□□□□ -1.4
GGA3-207ENST00000578896 SLC25A39Q9BZJ4 359 aaPredicted RBP6.32□□□□□ -1.4
GGA3-207ENST00000578896 V9GYH0 126 aa6.32□□□□□ -1.4
GGA3-207ENST00000578896 DUXBA0A1W2PPF3 345 aa6.31□□□□□ -1.4
GGA3-207ENST00000578896 CRXO43186 299 aaPredicted RBP6.31□□□□□ -1.4
GGA3-207ENST00000578896 NOL3O60936 208 aaKnown RBP6.31□□□□□ -1.4
GGA3-207ENST00000578896 MED6O75586 246 aa6.31□□□□□ -1.4
GGA3-207ENST00000578896 DEFB130BP0DP73 79 aa6.31□□□□□ -1.4
GGA3-207ENST00000578896 DEFB130AP0DP74 79 aa6.31□□□□□ -1.4
GGA3-207ENST00000578896 FAUP35544 74 aaKnown RBP6.31□□□□□ -1.4
GGA3-207ENST00000578896 RRAS2P62070 204 aaPredicted RBP6.31□□□□□ -1.4
GGA3-207ENST00000578896 POLR2GP62487 172 aaKnown RBP eCLIP6.31□□□□□ -1.4
GGA3-207ENST00000578896 SPATA31B1PQ5VZV4 182 aa6.31□□□□□ -1.4
GGA3-207ENST00000578896 Q6ZR54 194 aa6.31□□□□□ -1.4
GGA3-207ENST00000578896 LRTM2Q8N967 370 aa6.31□□□□□ -1.4
GGA3-207ENST00000578896 BPIFCQ8NFQ6 507 aa6.31□□□□□ -1.4
GGA3-207ENST00000578896 IGF2BP2-AS1Q96M15 143 aa6.31□□□□□ -1.4
GGA3-207ENST00000578896 UHRF2Q96PU4 802 aa6.31□□□□□ -1.4
GGA3-207ENST00000578896 TMEM147Q9BVK8 224 aa6.31□□□□□ -1.4
GGA3-207ENST00000578896 FLVCR2Q9UPI3 526 aa6.31□□□□□ -1.4
GGA3-207ENST00000578896 LINC00854A0A1B0GVQ3 168 aa6.3□□□□□ -1.4
GGA3-207ENST00000578896 A8MTW9 85 aa6.3□□□□□ -1.4
GGA3-207ENST00000578896 IL5P05113 134 aa6.3□□□□□ -1.4
GGA3-207ENST00000578896 SLC25A6P12236 298 aa6.3□□□□□ -1.4
GGA3-207ENST00000578896 HTN1P15515 57 aa6.3□□□□□ -1.4
GGA3-207ENST00000578896 MEOX2P50222 304 aa6.3□□□□□ -1.4
GGA3-207ENST00000578896 CYP2G1PQ6ZSU1 146 aa6.3□□□□□ -1.4
GGA3-207ENST00000578896 ZNF738Q8NE65 137 aa6.3□□□□□ -1.4
GGA3-207ENST00000578896 CIB3Q96Q77 187 aaPredicted RBP6.3□□□□□ -1.4
GGA3-207ENST00000578896 BCL7BQ9BQE9 202 aa6.3□□□□□ -1.4
GGA3-207ENST00000578896 KRTAP4-5Q9BYR2 181 aa6.3□□□□□ -1.4
GGA3-207ENST00000578896 STRAPQ9Y3F4 350 aaKnown RBP6.3□□□□□ -1.4
GGA3-207ENST00000578896 TMED3Q9Y3Q3 217 aa6.3□□□□□ -1.4
GGA3-207ENST00000578896 C9orf170A2RU37 121 aa6.29□□□□□ -1.4
GGA3-207ENST00000578896 CCDC160A6NGH7 325 aa6.29□□□□□ -1.4
GGA3-207ENST00000578896 H3BRN7 92 aa6.29□□□□□ -1.4
GGA3-207ENST00000578896 SSSCA1O60232 199 aa6.29□□□□□ -1.4
GGA3-207ENST00000578896 CFDP00746 253 aaPredicted RBP6.29□□□□□ -1.4
GGA3-207ENST00000578896 INSP01308 110 aa6.29□□□□□ -1.4
GGA3-207ENST00000578896 OR5G3P0C626 314 aa6.29□□□□□ -1.4
GGA3-207ENST00000578896 MED14OSP0DP75 135 aa6.29□□□□□ -1.4
GGA3-207ENST00000578896 AP3S2P59780 193 aa6.29□□□□□ -1.4
GGA3-207ENST00000578896 RHOBP62745 196 aa6.29□□□□□ -1.4
GGA3-207ENST00000578896 RPP30P78346 268 aaKnown RBP6.29□□□□□ -1.4
GGA3-207ENST00000578896 HIST1H1AQ02539 215 aaPredicted RBP6.29□□□□□ -1.4
GGA3-207ENST00000578896 OXA1LQ15070 435 aa6.29□□□□□ -1.4
GGA3-207ENST00000578896 TMEM144Q7Z5S9 345 aa6.29□□□□□ -1.4
GGA3-207ENST00000578896 FAM210BQ96KR6 192 aa6.29□□□□□ -1.4
GGA3-207ENST00000578896 SLC25A21Q9BQT8 299 aaPredicted RBP6.29□□□□□ -1.4
GGA3-207ENST00000578896 SHANK2-AS3Q9BTD1 123 aa6.29□□□□□ -1.4
GGA3-207ENST00000578896 PARD6GQ9BYG4 376 aaPredicted RBP6.29□□□□□ -1.4
GGA3-207ENST00000578896 PSENENQ9NZ42 101 aa6.29□□□□□ -1.4
GGA3-207ENST00000578896 HIGD1AQ9Y241 93 aa6.29□□□□□ -1.4
GGA3-207ENST00000578896 TEX48A0A1B0GUV7 120 aa6.28□□□□□ -1.4
GGA3-207ENST00000578896 PLAC8L1A1L4L8 177 aa6.28□□□□□ -1.4
GGA3-207ENST00000578896 PMS2P5A8MQ11 134 aa6.28□□□□□ -1.4
GGA3-207ENST00000578896 F5H768 121 aa6.28□□□□□ -1.4
GGA3-207ENST00000578896 H3BTX0 84 aa6.28□□□□□ -1.4
GGA3-207ENST00000578896 HYPMO75409 117 aa6.28□□□□□ -1.4
GGA3-207ENST00000578896 DUSP14O95147 198 aaKnown RBP6.28□□□□□ -1.4
GGA3-207ENST00000578896 SCGB1D2O95969 90 aa6.28□□□□□ -1.4
GGA3-207ENST00000578896 NUDT3O95989 172 aa6.28□□□□□ -1.4
GGA3-207ENST00000578896 METTL15P1P0C7V9 234 aa6.28□□□□□ -1.4
GGA3-207ENST00000578896 LINC00869P0C866 280 aa6.28□□□□□ -1.4
GGA3-207ENST00000578896 UBE2MP61081 183 aaKnown RBP6.28□□□□□ -1.4
GGA3-207ENST00000578896 ID3Q02535 119 aa6.28□□□□□ -1.4
GGA3-207ENST00000578896 SLC38A11Q08AI6 406 aa6.28□□□□□ -1.4
GGA3-207ENST00000578896 KIR3DS1Q14943 382 aa6.28□□□□□ -1.4
GGA3-207ENST00000578896 BAK1Q16611 211 aa6.28□□□□□ -1.4
GGA3-207ENST00000578896 C1orf134Q5TEV5 83 aa6.28□□□□□ -1.4
GGA3-207ENST00000578896 PATE2Q6UY27 113 aa6.28□□□□□ -1.4
GGA3-207ENST00000578896 CCDC190Q86UF4 302 aa6.28□□□□□ -1.4
GGA3-207ENST00000578896 OR4D5Q8NGN0 318 aa6.28□□□□□ -1.4
GGA3-207ENST00000578896 LINC01587Q99440 93 aa6.28□□□□□ -1.4
GGA3-207ENST00000578896 SLC45A2Q9UMX9 530 aa6.28□□□□□ -1.4
GGA3-207ENST00000578896 BOLA2-SMG1P6H3BVE0 249 aa6.27□□□□□ -1.41
GGA3-207ENST00000578896 CXCL3P19876 107 aa6.27□□□□□ -1.41
GGA3-207ENST00000578896 ANXA7P20073 488 aaKnown RBP6.27□□□□□ -1.41
GGA3-207ENST00000578896 S100A5P33763 92 aa6.27□□□□□ -1.41
GGA3-207ENST00000578896 RAP2BP61225 183 aa6.27□□□□□ -1.41
GGA3-207ENST00000578896 TNP2Q05952 138 aa6.27□□□□□ -1.41
GGA3-207ENST00000578896 ARL16Q0P5N6 197 aa6.27□□□□□ -1.41
GGA3-207ENST00000578896 PSG3Q16557 428 aa6.27□□□□□ -1.41
GGA3-207ENST00000578896 RNF212Q495C1 297 aa6.27□□□□□ -1.41
GGA3-207ENST00000578896 SAMD13Q5VXD3 122 aa6.27□□□□□ -1.41
GGA3-207ENST00000578896 OR8A1Q8NGG7 326 aa6.27□□□□□ -1.41
GGA3-207ENST00000578896 LRRC20Q8TCA0 184 aa6.27□□□□□ -1.41
GGA3-207ENST00000578896 GPR82Q96P67 336 aa6.27□□□□□ -1.41
GGA3-207ENST00000578896 ATG101Q9BSB4 218 aa6.27□□□□□ -1.41
GGA3-207ENST00000578896 SRRQ9GZT4 340 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms