RNA–Protein interactions for RNA: ENST00000578299.1

PTP4A1-204, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2 BASIC

Gene PTP4A1, Length 135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-204ENST00000578299 PNMTP11086 282 aa1.43□□□□□ -2.18
PTP4A1-204ENST00000578299 COX5AP20674 150 aa1.43□□□□□ -2.18
PTP4A1-204ENST00000578299 CCL1P22362 96 aa1.43□□□□□ -2.18
PTP4A1-204ENST00000578299 USF1P22415 310 aaPredicted RBP1.43□□□□□ -2.18
PTP4A1-204ENST00000578299 CRYBB3P26998 211 aa1.43□□□□□ -2.18
PTP4A1-204ENST00000578299 BLVRBP30043 206 aaPredicted RBP1.43□□□□□ -2.18
PTP4A1-204ENST00000578299 CMPK1P30085 196 aa1.43□□□□□ -2.18
PTP4A1-204ENST00000578299 KIR2DS4P43632 304 aa1.43□□□□□ -2.18
PTP4A1-204ENST00000578299 VDAC2P45880 294 aaPredicted RBP1.43□□□□□ -2.18
PTP4A1-204ENST00000578299 PSMB3P49720 205 aa1.43□□□□□ -2.18
PTP4A1-204ENST00000578299 GPM6AP51674 278 aa1.43□□□□□ -2.18
PTP4A1-204ENST00000578299 ZNF121P58317 390 aaPredicted RBP1.43□□□□□ -2.18
PTP4A1-204ENST00000578299 RPS15AP62244 130 aaKnown RBP1.43□□□□□ -2.18
PTP4A1-204ENST00000578299 CCL7P80098 99 aa1.43□□□□□ -2.18
PTP4A1-204ENST00000578299 ATP5G2Q06055 141 aa1.43□□□□□ -2.18
PTP4A1-204ENST00000578299 TFF3Q07654 80 aa1.43□□□□□ -2.18
PTP4A1-204ENST00000578299 AESQ08117 197 aa1.43□□□□□ -2.18
PTP4A1-204ENST00000578299 NNATQ16517 81 aa1.43□□□□□ -2.18
PTP4A1-204ENST00000578299 RPEL1Q2QD12 228 aa1.43□□□□□ -2.18
PTP4A1-204ENST00000578299 LRRC75BQ2VPJ9 315 aa1.43□□□□□ -2.18
PTP4A1-204ENST00000578299 NSUN5P1Q3KNT7 163 aa1.43□□□□□ -2.18
PTP4A1-204ENST00000578299 COX19Q49B96 90 aa1.43□□□□□ -2.18
PTP4A1-204ENST00000578299 TMEM97Q5BJF2 176 aa1.43□□□□□ -2.18
PTP4A1-204ENST00000578299 PLCXD3Q63HM9 321 aa1.43□□□□□ -2.18
PTP4A1-204ENST00000578299 Q6P435 159 aa1.43□□□□□ -2.18
PTP4A1-204ENST00000578299 DGAT2L6Q6ZPD8 337 aa1.43□□□□□ -2.18
PTP4A1-204ENST00000578299 ZNF818PQ6ZRF7 136 aa1.43□□□□□ -2.18
PTP4A1-204ENST00000578299 SHISA6Q6ZSJ9 500 aa1.43□□□□□ -2.18
PTP4A1-204ENST00000578299 LINC00173Q6ZV60 143 aa1.43□□□□□ -2.18
PTP4A1-204ENST00000578299 PRSS41Q7RTY9 318 aa1.43□□□□□ -2.18
PTP4A1-204ENST00000578299 C6orf201Q7Z4U5 140 aa1.43□□□□□ -2.18
PTP4A1-204ENST00000578299 VN1R4Q7Z5H5 301 aa1.43□□□□□ -2.18
PTP4A1-204ENST00000578299 ZNF547Q8IVP9 402 aa1.43□□□□□ -2.18
PTP4A1-204ENST00000578299 RPP25LQ8N5L8 163 aaKnown RBP1.43□□□□□ -2.18
PTP4A1-204ENST00000578299 CDRT4Q8N9R6 151 aa1.43□□□□□ -2.18
PTP4A1-204ENST00000578299 GATSQ8NAP1 163 aa1.43□□□□□ -2.18
PTP4A1-204ENST00000578299 OR11H1Q8NG94 326 aa1.43□□□□□ -2.18
PTP4A1-204ENST00000578299 OR8B12Q8NGG6 310 aa1.43□□□□□ -2.18
PTP4A1-204ENST00000578299 OR51T1Q8NGJ9 327 aa1.43□□□□□ -2.18
PTP4A1-204ENST00000578299 OR5D13Q8NGL4 314 aa1.43□□□□□ -2.18
PTP4A1-204ENST00000578299 OR2K2Q8NGT1 345 aa1.43□□□□□ -2.18
PTP4A1-204ENST00000578299 OR11H2Q8NH07 326 aa1.43□□□□□ -2.18
PTP4A1-204ENST00000578299 OR52E5Q8NH55 327 aa1.43□□□□□ -2.18
PTP4A1-204ENST00000578299 OR10D3Q8NH80 312 aa1.43□□□□□ -2.18
PTP4A1-204ENST00000578299 OR10G6Q8NH81 332 aa1.43□□□□□ -2.18
PTP4A1-204ENST00000578299 OR1F12Q8NHA8 337 aa1.43□□□□□ -2.18
PTP4A1-204ENST00000578299 C18orf32Q8TCD1 76 aa1.43□□□□□ -2.18
PTP4A1-204ENST00000578299 SCGB1C1Q8TD33 95 aa1.43□□□□□ -2.18
PTP4A1-204ENST00000578299 LMX1AQ8TE12 382 aa1.43□□□□□ -2.18
PTP4A1-204ENST00000578299 ZNF418Q8TF45 676 aaPredicted RBP1.43□□□□□ -2.18
PTP4A1-204ENST00000578299 RNF133Q8WVZ7 376 aa1.43□□□□□ -2.18
PTP4A1-204ENST00000578299 RLN3Q8WXF3 142 aa1.43□□□□□ -2.18
PTP4A1-204ENST00000578299 RDH5Q92781 318 aa1.43□□□□□ -2.18
PTP4A1-204ENST00000578299 TMEM54Q969K7 222 aa1.43□□□□□ -2.18
PTP4A1-204ENST00000578299 LSM10Q969L4 123 aaKnown RBP1.43□□□□□ -2.18
PTP4A1-204ENST00000578299 FAM131CQ96AQ9 280 aa1.43□□□□□ -2.18
PTP4A1-204ENST00000578299 BORCS7Q96B45 105 aa1.43□□□□□ -2.18
PTP4A1-204ENST00000578299 C10orf35Q96D05 121 aa1.43□□□□□ -2.18
PTP4A1-204ENST00000578299 OR4C12Q96R67 309 aa1.43□□□□□ -2.18
PTP4A1-204ENST00000578299 PBOV1Q9GZY1 135 aa1.43□□□□□ -2.18
PTP4A1-204ENST00000578299 TMEM222Q9H0R3 208 aa1.43□□□□□ -2.18
PTP4A1-204ENST00000578299 METTL7AQ9H8H3 244 aa1.43□□□□□ -2.18
PTP4A1-204ENST00000578299 KCNIP2Q9NS61 270 aa1.43□□□□□ -2.18
PTP4A1-204ENST00000578299 HRASLS2Q9NWW9 162 aa1.43□□□□□ -2.18
PTP4A1-204ENST00000578299 KCNIP1Q9NZI2 227 aa1.43□□□□□ -2.18
PTP4A1-204ENST00000578299 ARL2-SNX15V9GYD0 113 aa1.43□□□□□ -2.18
PTP4A1-204ENST00000578299 V9GYV3 84 aa1.43□□□□□ -2.18
PTP4A1-204ENST00000578299 MUC22E2RYF6 1773 aaPredicted RBP1.43□□□□□ -2.18
PTP4A1-204ENST00000578299 LRRK1Q38SD2 2015 aa1.43□□□□□ -2.18
PTP4A1-204ENST00000578299 SCN3AQ9NY46 2000 aa1.43□□□□□ -2.18
PTP4A1-204ENST00000578299 FREM3P0C091 2139 aa1.43□□□□□ -2.18
PTP4A1-204ENST00000578299 THADAQ6YHU6 1953 aa1.43□□□□□ -2.18
PTP4A1-204ENST00000578299 A0A0C4DFX4 3053 aa1.43□□□□□ -2.18
PTP4A1-204ENST00000578299 SZT2Q5T011 3432 aa1.43□□□□□ -2.18
PTP4A1-204ENST00000578299 SHANK1Q9Y566 2161 aa1.42□□□□□ -2.18
PTP4A1-204ENST00000578299 ATRXP46100 2492 aa1.42□□□□□ -2.18
PTP4A1-204ENST00000578299 KIAA1549Q9HCM3 1950 aa1.42□□□□□ -2.18
PTP4A1-204ENST00000578299 SCN10AQ9Y5Y9 1956 aa1.42□□□□□ -2.18
PTP4A1-204ENST00000578299 TRAV36DV7A0A075B6V5 113 aa1.42□□□□□ -2.18
PTP4A1-204ENST00000578299 A0A087WX48 190 aa1.42□□□□□ -2.18
PTP4A1-204ENST00000578299 IGKV1D-13A0A0B4J2D9 117 aa1.42□□□□□ -2.18
PTP4A1-204ENST00000578299 IGHV1-24A0A0C4DH33 117 aa1.42□□□□□ -2.18
PTP4A1-204ENST00000578299 C3orf85A0A1B0GTC6 90 aa1.42□□□□□ -2.18
PTP4A1-204ENST00000578299 TMEM189A5PLL7 270 aa1.42□□□□□ -2.18
PTP4A1-204ENST00000578299 C5orf63A6NC05 138 aa1.42□□□□□ -2.18
PTP4A1-204ENST00000578299 CD300LBA8K4G0 201 aa1.42□□□□□ -2.18
PTP4A1-204ENST00000578299 ZNF850A8MQ14 1090 aa1.42□□□□□ -2.18
PTP4A1-204ENST00000578299 C9JCJ5 164 aa1.42□□□□□ -2.18
PTP4A1-204ENST00000578299 H0Y980 276 aa1.42□□□□□ -2.18
PTP4A1-204ENST00000578299 SYS1-DBNDD2H3BUS1 97 aa1.42□□□□□ -2.18
PTP4A1-204ENST00000578299 RTL8CO15255 209 aa1.42□□□□□ -2.18
PTP4A1-204ENST00000578299 CHST1O43916 411 aa1.42□□□□□ -2.18
PTP4A1-204ENST00000578299 PDE6DO43924 150 aa1.42□□□□□ -2.18
PTP4A1-204ENST00000578299 SPINK4O60575 86 aa1.42□□□□□ -2.18
PTP4A1-204ENST00000578299 SLC16A7O60669 478 aa1.42□□□□□ -2.18
PTP4A1-204ENST00000578299 HSBP1O75506 76 aa1.42□□□□□ -2.18
PTP4A1-204ENST00000578299 PPYP01298 95 aa1.42□□□□□ -2.18
PTP4A1-204ENST00000578299 HLA-DQA1P01909 254 aa1.42□□□□□ -2.18
PTP4A1-204ENST00000578299 APOA2P02652 100 aa1.42□□□□□ -2.18
PTP4A1-204ENST00000578299 APCSP02743 223 aa1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 160.7 ms