RNA–Protein interactions for RNA: ENST00000577751.5

SS18-208, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-208ENST00000577751 SPRY2O43597 315 aa14.18□□□□□ -0.14
SS18-208ENST00000577751 PET100P0DJ07 73 aa14.18□□□□□ -0.14
SS18-208ENST00000577751 PSMB3P49720 205 aa14.18□□□□□ -0.14
SS18-208ENST00000577751 BAXQ07812 192 aa14.18□□□□□ -0.14
SS18-208ENST00000577751 DEFB135Q30KP9 77 aa14.18□□□□□ -0.14
SS18-208ENST00000577751 OR5C1Q8NGR4 320 aa14.18□□□□□ -0.14
SS18-208ENST00000577751 TMEM37Q8WXS4 190 aa14.18□□□□□ -0.14
SS18-208ENST00000577751 RSG1Q9BU20 258 aa14.18□□□□□ -0.14
SS18-208ENST00000577751 ISLRO14498 428 aa14.17□□□□□ -0.14
SS18-208ENST00000577751 MPDU1O75352 247 aa14.17□□□□□ -0.14
SS18-208ENST00000577751 ID1P41134 155 aa14.17□□□□□ -0.14
SS18-208ENST00000577751 RPL29P47914 159 aaKnown RBP14.17□□□□□ -0.14
SS18-208ENST00000577751 MEOX2P50222 304 aa14.17□□□□□ -0.14
SS18-208ENST00000577751 RGS21Q2M5E4 152 aa14.17□□□□□ -0.14
SS18-208ENST00000577751 ACTL10Q5JWF8 245 aa14.17□□□□□ -0.14
SS18-208ENST00000577751 SAMD13Q5VXD3 122 aa14.17□□□□□ -0.14
SS18-208ENST00000577751 OR11H7Q8NGC8 314 aa14.17□□□□□ -0.14
SS18-208ENST00000577751 ELOA3CA0A087WX78 387 aaPredicted RBP14.16□□□□□ -0.14
SS18-208ENST00000577751 LYL1P12980 280 aa14.16□□□□□ -0.14
SS18-208ENST00000577751 RPL7P18124 248 aaKnown RBP14.16□□□□□ -0.14
SS18-208ENST00000577751 OPCMLQ14982 345 aa14.16□□□□□ -0.14
SS18-208ENST00000577751 MIC13Q5XKP0 118 aa14.16□□□□□ -0.14
SS18-208ENST00000577751 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.16□□□□□ -0.14
SS18-208ENST00000577751 LINC00305Q7Z4B0 112 aa14.16□□□□□ -0.14
SS18-208ENST00000577751 MUC7Q8TAX7 377 aa14.16□□□□□ -0.14
SS18-208ENST00000577751 MED28Q9H204 178 aa14.16□□□□□ -0.14
SS18-208ENST00000577751 RNF24Q9Y225 148 aa14.16□□□□□ -0.14
SS18-208ENST00000577751 C3orf84H3BNL1 204 aa14.15□□□□□ -0.14
SS18-208ENST00000577751 MRPS12O15235 138 aaKnown RBP14.15□□□□□ -0.14
SS18-208ENST00000577751 OXA1LQ15070 435 aa14.15□□□□□ -0.14
SS18-208ENST00000577751 FCN2Q15485 313 aa14.15□□□□□ -0.14
SS18-208ENST00000577751 MORN3Q6PF18 240 aaPredicted RBP14.15□□□□□ -0.14
SS18-208ENST00000577751 Q6ZRG5 221 aa14.15□□□□□ -0.14
SS18-208ENST00000577751 DNAJC4Q9NNZ3 241 aa14.15□□□□□ -0.14
SS18-208ENST00000577751 H3BMM0 161 aa14.14□□□□□ -0.15
SS18-208ENST00000577751 COX7A2P2O60397 106 aa14.14□□□□□ -0.15
SS18-208ENST00000577751 CA1P00915 261 aaPredicted RBP14.14□□□□□ -0.15
SS18-208ENST00000577751 GIG44P09565 113 aaPredicted RBP14.14□□□□□ -0.15
SS18-208ENST00000577751 SPP1P10451 314 aa14.14□□□□□ -0.15
SS18-208ENST00000577751 FGF7P21781 194 aa14.14□□□□□ -0.15
SS18-208ENST00000577751 GATAD1Q8WUU5 269 aa14.14□□□□□ -0.15
SS18-208ENST00000577751 C16orf92Q96LL3 132 aa14.14□□□□□ -0.15
SS18-208ENST00000577751 LINC00052Q96N35 136 aa14.14□□□□□ -0.15
SS18-208ENST00000577751 SLC39A9Q9NUM3 307 aa14.14□□□□□ -0.15
SS18-208ENST00000577751 MBD2Q9UBB5 411 aa14.14□□□□□ -0.15
SS18-208ENST00000577751 HLA-DRB4P13762 266 aa14.13□□□□□ -0.15
SS18-208ENST00000577751 RPL12P30050 165 aaKnown RBP14.13□□□□□ -0.15
SS18-208ENST00000577751 B2MP61769 119 aa14.13□□□□□ -0.15
SS18-208ENST00000577751 GDF5OSQ5U4N7 250 aa14.13□□□□□ -0.15
SS18-208ENST00000577751 C10orf113Q5VZT2 155 aa14.13□□□□□ -0.15
SS18-208ENST00000577751 OR1L4Q8NGR5 311 aa14.13□□□□□ -0.15
SS18-208ENST00000577751 NPCDR1Q9BY65 106 aa14.13□□□□□ -0.15
SS18-208ENST00000577751 SAV1Q9H4B6 383 aaPredicted RBP14.13□□□□□ -0.15
SS18-208ENST00000577751 HSPB11Q9Y547 144 aa14.13□□□□□ -0.15
SS18-208ENST00000577751 PXMP4Q9Y6I8 212 aa14.13□□□□□ -0.15
SS18-208ENST00000577751 HLA-DRB4X5D2U9 266 aa14.13□□□□□ -0.15
SS18-208ENST00000577751 A0A087X0K7 114 aa14.12□□□□□ -0.15
SS18-208ENST00000577751 TRAV8-2A0A0B4J237 113 aa14.12□□□□□ -0.15
SS18-208ENST00000577751 ATF4P18848 351 aaPredicted RBP14.12□□□□□ -0.15
SS18-208ENST00000577751 DEFB1P60022 68 aa14.12□□□□□ -0.15
SS18-208ENST00000577751 CLINT1Q14677 625 aa14.12□□□□□ -0.15
SS18-208ENST00000577751 TMEM41BQ5BJD5 291 aa14.12□□□□□ -0.15
SS18-208ENST00000577751 MORN5Q5VZ52 161 aa14.12□□□□□ -0.15
SS18-208ENST00000577751 FOXI2Q6ZQN5 318 aa14.12□□□□□ -0.15
SS18-208ENST00000577751 THAP6Q8TBB0 222 aa14.12□□□□□ -0.15
SS18-208ENST00000577751 C20orf173Q96LM9 149 aa14.12□□□□□ -0.15
SS18-208ENST00000577751 PFDN5Q99471 154 aa14.12□□□□□ -0.15
SS18-208ENST00000577751 WDR61Q9GZS3 305 aaKnown RBP14.12□□□□□ -0.15
SS18-208ENST00000577751 C4BPBP20851 252 aa14.11□□□□□ -0.15
SS18-208ENST00000577751 CLUHP3Q96NS8 147 aa14.11□□□□□ -0.15
SS18-208ENST00000577751 SPATA31B1PQ5VZV4 182 aa14.1□□□□□ -0.15
SS18-208ENST00000577751 BPIFA4PQ86YQ2 179 aa14.1□□□□□ -0.15
SS18-208ENST00000577751 ASB13Q8WXK3 278 aa14.1□□□□□ -0.15
SS18-208ENST00000577751 ATP5SQ99766 215 aa14.1□□□□□ -0.15
SS18-208ENST00000577751 RPRMQ9NS64 109 aa14.1□□□□□ -0.15
SS18-208ENST00000577751 DNAH7Q8WXX0 4024 aa14.1□□□□□ -0.15
SS18-208ENST00000577751 FGL1Q08830 312 aa14.09□□□□□ -0.15
SS18-208ENST00000577751 CSNK1G2-AS1Q8NCQ2 148 aa14.09□□□□□ -0.15
SS18-208ENST00000577751 RARRES2Q99969 163 aa14.09□□□□□ -0.15
SS18-208ENST00000577751 A0A0J9YX75 114 aa14.08□□□□□ -0.16
SS18-208ENST00000577751 F6UB75 175 aa14.08□□□□□ -0.16
SS18-208ENST00000577751 GIPP09681 153 aaPredicted RBP14.08□□□□□ -0.16
SS18-208ENST00000577751 NUTF2P61970 127 aaKnown RBP14.08□□□□□ -0.16
SS18-208ENST00000577751 CASC10Q5T4H9 136 aa14.08□□□□□ -0.16
SS18-208ENST00000577751 IGFL4Q6B9Z1 124 aa14.08□□□□□ -0.16
SS18-208ENST00000577751 OR11H2Q8NH07 326 aa14.08□□□□□ -0.16
SS18-208ENST00000577751 TRAV5A0A0B4J249 113 aa14.07□□□□□ -0.16
SS18-208ENST00000577751 A0A0J9YWU9 116 aa14.07□□□□□ -0.16
SS18-208ENST00000577751 A8MTW9 85 aa14.07□□□□□ -0.16
SS18-208ENST00000577751 IGLC2P0DOY2 106 aa14.07□□□□□ -0.16
SS18-208ENST00000577751 CXCL2P19875 107 aa14.07□□□□□ -0.16
SS18-208ENST00000577751 Q5BKY6 102 aa14.07□□□□□ -0.16
SS18-208ENST00000577751 EBLN2Q6P2I7 272 aa14.07□□□□□ -0.16
SS18-208ENST00000577751 RNF182Q8N6D2 247 aa14.07□□□□□ -0.16
SS18-208ENST00000577751 GCSAMLQ5JQS6 135 aa14.06□□□□□ -0.16
SS18-208ENST00000577751 FAM78BQ5VT40 261 aa14.06□□□□□ -0.16
SS18-208ENST00000577751 LCN15Q6UWW0 184 aa14.06□□□□□ -0.16
SS18-208ENST00000577751 ZNF709Q8N972 641 aa14.06□□□□□ -0.16
SS18-208ENST00000577751 IL17DQ8TAD2 202 aa14.06□□□□□ -0.16
SS18-208ENST00000577751 C1QTNF4Q9BXJ3 329 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms