RNA–Protein interactions for RNA: ENST00000577716.5

RNF43-203, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 4,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-203ENST00000577716 SNHG12Q9BXW3 62 aa8.86□□□□□ -0.99
RNF43-203ENST00000577716 A0A1W2PPI3 338 aa8.86□□□□□ -0.99
RNF43-203ENST00000577716 D6R8Y8 96 aa8.86□□□□□ -0.99
RNF43-203ENST00000577716 APOMO95445 188 aa8.86□□□□□ -0.99
RNF43-203ENST00000577716 ORAOV1Q8WV07 137 aa8.86□□□□□ -0.99
RNF43-203ENST00000577716 MS4A6AQ9H2W1 248 aa8.86□□□□□ -0.99
RNF43-203ENST00000577716 KLF2Q9Y5W3 355 aaPredicted RBP8.86□□□□□ -0.99
RNF43-203ENST00000577716 A0A1B0GWB2 263 aa8.85□□□□□ -0.99
RNF43-203ENST00000577716 CRXO43186 299 aaPredicted RBP8.85□□□□□ -0.99
RNF43-203ENST00000577716 RPL15P61313 204 aaKnown RBP8.85□□□□□ -0.99
RNF43-203ENST00000577716 PAPPA-AS1Q5QFB9 102 aa8.85□□□□□ -0.99
RNF43-203ENST00000577716 FAM169BQ8N8A8 192 aa8.85□□□□□ -0.99
RNF43-203ENST00000577716 OR4X2Q8NGF9 303 aa8.85□□□□□ -0.99
RNF43-203ENST00000577716 TDGF1P3P51864 188 aa8.85□□□□□ -0.99
RNF43-203ENST00000577716 LYZL1Q6UWQ5 148 aa8.85□□□□□ -0.99
RNF43-203ENST00000577716 OR2K2Q8NGT1 345 aa8.85□□□□□ -0.99
RNF43-203ENST00000577716 C20orf144Q9BQM9 153 aa8.85□□□□□ -0.99
RNF43-203ENST00000577716 MCRIP2Q9BUT9 160 aaKnown RBP8.85□□□□□ -0.99
RNF43-203ENST00000577716 SELENOKQ9Y6D0 94 aa8.85□□□□□ -0.99
RNF43-203ENST00000577716 A0A0G2JLM5 398 aa8.85□□□□□ -0.99
RNF43-203ENST00000577716 Q6ZS92 163 aa8.85□□□□□ -0.99
RNF43-203ENST00000577716 GLMPQ8WWB7 406 aa8.85□□□□□ -0.99
RNF43-203ENST00000577716 BEX4Q9NWD9 120 aaPredicted RBP8.85□□□□□ -0.99
RNF43-203ENST00000577716 SYS1-DBNDD2H3BUS1 97 aa8.84□□□□□ -0.99
RNF43-203ENST00000577716 DKK1O94907 266 aa8.84□□□□□ -0.99
RNF43-203ENST00000577716 YPEL3P61236 119 aaPredicted RBP8.84□□□□□ -0.99
RNF43-203ENST00000577716 AMMECR1LQ6DCA0 310 aa8.84□□□□□ -0.99
RNF43-203ENST00000577716 ZNF329Q86UD4 541 aa8.84□□□□□ -0.99
RNF43-203ENST00000577716 FGF23Q9GZV9 251 aaPredicted RBP8.84□□□□□ -0.99
RNF43-203ENST00000577716 A0A0G2JNJ9 132 aa8.84□□□□□ -0.99
RNF43-203ENST00000577716 GGTLC3B5MD39 225 aa8.84□□□□□ -0.99
RNF43-203ENST00000577716 DPM2O94777 84 aa8.84□□□□□ -0.99
RNF43-203ENST00000577716 DUX4L9Q6RFH8 374 aaPredicted RBP8.84□□□□□ -0.99
RNF43-203ENST00000577716 C18orf32Q8TCD1 76 aa8.84□□□□□ -0.99
RNF43-203ENST00000577716 JKAMPQ9P055 326 aa8.84□□□□□ -0.99
RNF43-203ENST00000577716 Q9UFV3 132 aa8.84□□□□□ -0.99
RNF43-203ENST00000577716 FXYD7P58549 80 aa8.84□□□□□ -0.99
RNF43-203ENST00000577716 SEC11AP67812 179 aa8.84□□□□□ -0.99
RNF43-203ENST00000577716 KLRD1Q13241 179 aa8.84□□□□□ -0.99
RNF43-203ENST00000577716 GEMIN7Q9H840 131 aaKnown RBP8.84□□□□□ -0.99
RNF43-203ENST00000577716 LINC00527Q9UJ94 153 aa8.84□□□□□ -0.99
RNF43-203ENST00000577716 ZNF256Q9Y2P7 627 aaPredicted RBP8.84□□□□□ -0.99
RNF43-203ENST00000577716 C15orf65H3BRN8 121 aa8.84□□□□□ -0.99
RNF43-203ENST00000577716 RNASE4P34096 147 aaKnown RBP8.84□□□□□ -0.99
RNF43-203ENST00000577716 ZNF134P52741 427 aa8.84□□□□□ -0.99
RNF43-203ENST00000577716 RPRMLQ8N4K4 120 aa8.84□□□□□ -0.99
RNF43-203ENST00000577716 NUP37Q8NFH4 326 aa8.84□□□□□ -0.99
RNF43-203ENST00000577716 Q8TAT8 98 aa8.84□□□□□ -0.99
RNF43-203ENST00000577716 NAA38Q9BRA0 125 aaKnown RBP8.84□□□□□ -0.99
RNF43-203ENST00000577716 MEGF9Q9H1U4 602 aa8.84□□□□□ -0.99
RNF43-203ENST00000577716 DYSFO75923 2080 aa8.83□□□□□ -1
RNF43-203ENST00000577716 TOMM40O96008 361 aa8.83□□□□□ -1
RNF43-203ENST00000577716 THBDP07204 575 aa8.83□□□□□ -1
RNF43-203ENST00000577716 C15orf32Q32M92 178 aa8.83□□□□□ -1
RNF43-203ENST00000577716 TPTE2P1Q5T6R2 138 aa8.83□□□□□ -1
RNF43-203ENST00000577716 CSPG4Q6UVK1 2322 aa8.83□□□□□ -1
RNF43-203ENST00000577716 A0A087X0K7 114 aa8.83□□□□□ -1
RNF43-203ENST00000577716 F2Z2F3 143 aa8.83□□□□□ -1
RNF43-203ENST00000577716 C19orf54Q5BKX5 351 aa8.83□□□□□ -1
RNF43-203ENST00000577716 CDPF1Q6NVV7 123 aa8.83□□□□□ -1
RNF43-203ENST00000577716 RNF5Q99942 180 aa8.83□□□□□ -1
RNF43-203ENST00000577716 BUB1B-PAK6H3BSN5 160 aa8.83□□□□□ -1
RNF43-203ENST00000577716 C5orf64Q2M2E5 130 aa8.83□□□□□ -1
RNF43-203ENST00000577716 SFTA2Q6UW10 78 aa8.83□□□□□ -1
RNF43-203ENST00000577716 ZNF418Q8TF45 676 aaPredicted RBP8.83□□□□□ -1
RNF43-203ENST00000577716 C7orf69Q9H7B7 122 aa8.83□□□□□ -1
RNF43-203ENST00000577716 C17orf58Q2M2W7 97 aa8.82□□□□□ -1
RNF43-203ENST00000577716 Q6ZSR3 168 aa8.82□□□□□ -1
RNF43-203ENST00000577716 Q6ZWC4 215 aa8.82□□□□□ -1
RNF43-203ENST00000577716 RAX2Q96IS3 184 aa8.82□□□□□ -1
RNF43-203ENST00000577716 EML6Q6ZMW3 1958 aa8.82□□□□□ -1
RNF43-203ENST00000577716 NOTCH2Q04721 2471 aa8.82□□□□□ -1
RNF43-203ENST00000577716 GUSBP1Q15486 140 aa8.82□□□□□ -1
RNF43-203ENST00000577716 SPACA3Q8IXA5 215 aa8.82□□□□□ -1
RNF43-203ENST00000577716 NDUFA4L2Q9NRX3 87 aa8.82□□□□□ -1
RNF43-203ENST00000577716 V9GYV3 84 aa8.82□□□□□ -1
RNF43-203ENST00000577716 LY6HO94772 140 aa8.82□□□□□ -1
RNF43-203ENST00000577716 SRSF1Q07955 248 aaKnown RBP eCLIP8.82□□□□□ -12e-7■■□□□ 11.6
RNF43-203ENST00000577716 HSD52Q0P140 79 aa8.82□□□□□ -1
RNF43-203ENST00000577716 CENPVQ7Z7K6 275 aaPredicted RBP8.82□□□□□ -1
RNF43-203ENST00000577716 WNK1Q9H4A3 2382 aa8.82□□□□□ -1
RNF43-203ENST00000577716 TRAV21A0A0B4J279 112 aa8.82□□□□□ -1
RNF43-203ENST00000577716 MMP23AO75900 390 aa8.82□□□□□ -1
RNF43-203ENST00000577716 SMAGPQ0VAQ4 97 aa8.82□□□□□ -1
RNF43-203ENST00000577716 Q86TA4 180 aa8.82□□□□□ -1
RNF43-203ENST00000577716 FAM168AQ92567 244 aa8.82□□□□□ -1
RNF43-203ENST00000577716 DUX5Q96PT3 197 aa8.82□□□□□ -1
RNF43-203ENST00000577716 PLXNB1O43157 2135 aa8.81□□□□□ -1
RNF43-203ENST00000577716 AMN1Q8IY45 258 aa8.81□□□□□ -1
RNF43-203ENST00000577716 JMJD8Q96S16 334 aa8.81□□□□□ -1
RNF43-203ENST00000577716 IGKCP01834 107 aa8.81□□□□□ -1
RNF43-203ENST00000577716 ARMS2P0C7Q2 107 aa8.81□□□□□ -1
RNF43-203ENST00000577716 CFHR2P36980 270 aa8.81□□□□□ -1
RNF43-203ENST00000577716 CIRBPQ14011 172 aaKnown RBP8.81□□□□□ -1
RNF43-203ENST00000577716 PSG3Q16557 428 aa8.81□□□□□ -1
RNF43-203ENST00000577716 IGFL4Q6B9Z1 124 aa8.81□□□□□ -1
RNF43-203ENST00000577716 GATA4P43694 442 aa8.81□□□□□ -1
RNF43-203ENST00000577716 VMO1Q7Z5L0 202 aa8.81□□□□□ -1
RNF43-203ENST00000577716 MRPL52Q86TS9 123 aaKnown RBP8.81□□□□□ -1
RNF43-203ENST00000577716 OR9G4Q8NGQ1 327 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms