RNA–Protein interactions for RNA: ENST00000576958.1

PRPF8-215, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 416 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-215ENST00000576958 TMEM208Q9BTX3 173 aa8.42□□□□□ -1.06
PRPF8-215ENST00000576958 MRPS26Q9BYN8 205 aaKnown RBP8.42□□□□□ -1.06
PRPF8-215ENST00000576958 CCDC59Q9P031 241 aaKnown RBP8.42□□□□□ -1.06
PRPF8-215ENST00000576958 SCP2D1Q9UJQ7 156 aa8.42□□□□□ -1.06
PRPF8-215ENST00000576958 LINC00588Q9Y4M8 146 aa8.42□□□□□ -1.06
PRPF8-215ENST00000576958 F5H768 121 aa8.41□□□□□ -1.06
PRPF8-215ENST00000576958 H3BRN7 92 aa8.41□□□□□ -1.06
PRPF8-215ENST00000576958 H3BTX0 84 aa8.41□□□□□ -1.06
PRPF8-215ENST00000576958 ADAP1O75689 374 aa8.41□□□□□ -1.06
PRPF8-215ENST00000576958 HTN1P15515 57 aa8.41□□□□□ -1.06
PRPF8-215ENST00000576958 SPANXN5Q5MJ07 72 aa8.41□□□□□ -1.06
PRPF8-215ENST00000576958 FABP12A6NFH5 140 aa8.4□□□□□ -1.06
PRPF8-215ENST00000576958 C16orf90A8MZG2 172 aa8.4□□□□□ -1.06
PRPF8-215ENST00000576958 SYNGR2O43760 224 aa8.4□□□□□ -1.06
PRPF8-215ENST00000576958 FUSP35637 526 aaKnown RBP eCLIP8.4□□□□□ -1.06
PRPF8-215ENST00000576958 NUP62P37198 522 aaPredicted RBP8.4□□□□□ -1.06
PRPF8-215ENST00000576958 GALR1P47211 349 aa8.4□□□□□ -1.06
PRPF8-215ENST00000576958 HIST1H1AQ02539 215 aaPredicted RBP8.4□□□□□ -1.06
PRPF8-215ENST00000576958 GGNBP1Q5YKI7 109 aa8.4□□□□□ -1.06
PRPF8-215ENST00000576958 PATE2Q6UY27 113 aa8.4□□□□□ -1.06
PRPF8-215ENST00000576958 RNF141Q8WVD5 230 aa8.4□□□□□ -1.06
PRPF8-215ENST00000576958 FAM210BQ96KR6 192 aa8.4□□□□□ -1.06
PRPF8-215ENST00000576958 V9GYH0 126 aa8.4□□□□□ -1.06
PRPF8-215ENST00000576958 HERC1Q15751 4861 aa8.39□□□□□ -1.07
PRPF8-215ENST00000576958 NBDYA0A0U1RRE5 68 aa8.39□□□□□ -1.07
PRPF8-215ENST00000576958 SMCO3A2RU48 225 aa8.39□□□□□ -1.07
PRPF8-215ENST00000576958 PMS2P5A8MQ11 134 aa8.39□□□□□ -1.07
PRPF8-215ENST00000576958 H3BMQ9 156 aa8.39□□□□□ -1.07
PRPF8-215ENST00000576958 SFT2D2O95562 160 aa8.39□□□□□ -1.07
PRPF8-215ENST00000576958 INSP01308 110 aa8.39□□□□□ -1.07
PRPF8-215ENST00000576958 RRAS2P62070 204 aaPredicted RBP8.39□□□□□ -1.07
PRPF8-215ENST00000576958 POLR2GP62487 172 aaKnown RBP eCLIP8.39□□□□□ -1.07
PRPF8-215ENST00000576958 RAB11AP62491 216 aa8.39□□□□□ -1.07
PRPF8-215ENST00000576958 AKR1C1Q04828 323 aa8.39□□□□□ -1.07
PRPF8-215ENST00000576958 MORN5Q5VZ52 161 aa8.39□□□□□ -1.07
PRPF8-215ENST00000576958 MAPKAPK5-AS1Q8N8E1 139 aa8.39□□□□□ -1.07
PRPF8-215ENST00000576958 ZNF738Q8NE65 137 aa8.39□□□□□ -1.07
PRPF8-215ENST00000576958 FLVCR2Q9UPI3 526 aa8.39□□□□□ -1.07
PRPF8-215ENST00000576958 TMED3Q9Y3Q3 217 aa8.39□□□□□ -1.07
PRPF8-215ENST00000576958 PRAC2D3DTV9 90 aa8.38□□□□□ -1.07
PRPF8-215ENST00000576958 BOLA2-SMG1P6H3BVE0 249 aa8.38□□□□□ -1.07
PRPF8-215ENST00000576958 ANXA3P12429 323 aa8.38□□□□□ -1.07
PRPF8-215ENST00000576958 CXCL3P19876 107 aa8.38□□□□□ -1.07
PRPF8-215ENST00000576958 KRTAP10-2P60368 255 aa8.38□□□□□ -1.07
PRPF8-215ENST00000576958 PYDC2Q56P42 97 aa8.38□□□□□ -1.07
PRPF8-215ENST00000576958 TMEM128Q5BJH2 165 aa8.38□□□□□ -1.07
PRPF8-215ENST00000576958 SPATA31B1PQ5VZV4 182 aa8.38□□□□□ -1.07
PRPF8-215ENST00000576958 CYP2G1PQ6ZSU1 146 aa8.38□□□□□ -1.07
PRPF8-215ENST00000576958 LRTM2Q8N967 370 aa8.38□□□□□ -1.07
PRPF8-215ENST00000576958 BPIFCQ8NFQ6 507 aa8.38□□□□□ -1.07
PRPF8-215ENST00000576958 ATG101Q9BSB4 218 aa8.38□□□□□ -1.07
PRPF8-215ENST00000576958 SHANK2-AS3Q9BTD1 123 aa8.38□□□□□ -1.07
PRPF8-215ENST00000576958 TMEM147Q9BVK8 224 aa8.38□□□□□ -1.07
PRPF8-215ENST00000576958 RSL24D1Q9UHA3 163 aaKnown RBP8.38□□□□□ -1.07
PRPF8-215ENST00000576958 RABL2BQ9UNT1 228 aa8.38□□□□□ -1.07
PRPF8-215ENST00000576958 TEX48A0A1B0GUV7 120 aa8.37□□□□□ -1.07
PRPF8-215ENST00000576958 SLC17A3O00476 420 aa8.37□□□□□ -1.07
PRPF8-215ENST00000576958 MRPS12O15235 138 aaKnown RBP8.37□□□□□ -1.07
PRPF8-215ENST00000576958 FABP1P07148 127 aa8.37□□□□□ -1.07
PRPF8-215ENST00000576958 LINC00869P0C866 280 aa8.37□□□□□ -1.07
PRPF8-215ENST00000576958 MEOX2P50222 304 aa8.37□□□□□ -1.07
PRPF8-215ENST00000576958 SRPXP78539 464 aa8.37□□□□□ -1.07
PRPF8-215ENST00000576958 SLC38A11Q08AI6 406 aa8.37□□□□□ -1.07
PRPF8-215ENST00000576958 ARL16Q0P5N6 197 aa8.37□□□□□ -1.07
PRPF8-215ENST00000576958 C6orf223Q8N319 242 aa8.37□□□□□ -1.07
PRPF8-215ENST00000576958 OR8A1Q8NGG7 326 aa8.37□□□□□ -1.07
PRPF8-215ENST00000576958 MCFD2Q8NI22 146 aa8.37□□□□□ -1.07
PRPF8-215ENST00000576958 RAB2BQ8WUD1 216 aa8.37□□□□□ -1.07
PRPF8-215ENST00000576958 SCGB3A2Q96PL1 93 aa8.37□□□□□ -1.07
PRPF8-215ENST00000576958 LINC01587Q99440 93 aa8.37□□□□□ -1.07
PRPF8-215ENST00000576958 NOP10Q9NPE3 64 aaKnown RBP8.37□□□□□ -1.07
PRPF8-215ENST00000576958 PFDN2Q9UHV9 154 aa8.37□□□□□ -1.07
PRPF8-215ENST00000576958 A0A0J9YY99 117 aa8.36□□□□□ -1.07
PRPF8-215ENST00000576958 LYRM9A8MSI8 78 aa8.36□□□□□ -1.07
PRPF8-215ENST00000576958 J3KRW8 73 aa8.36□□□□□ -1.07
PRPF8-215ENST00000576958 SSSCA1O60232 199 aa8.36□□□□□ -1.07
PRPF8-215ENST00000576958 OR5G3P0C626 314 aa8.36□□□□□ -1.07
PRPF8-215ENST00000576958 HOXA5P20719 270 aa8.36□□□□□ -1.07
PRPF8-215ENST00000576958 ATP5IP56385 69 aaPredicted RBP8.36□□□□□ -1.07
PRPF8-215ENST00000576958 UBE2MP61081 183 aaKnown RBP8.36□□□□□ -1.07
PRPF8-215ENST00000576958 RHOBP62745 196 aa8.36□□□□□ -1.07
PRPF8-215ENST00000576958 DLK1P80370 383 aa8.36□□□□□ -1.07
PRPF8-215ENST00000576958 SOHLH1Q5JUK2 328 aa8.36□□□□□ -1.07
PRPF8-215ENST00000576958 TOMM5Q8N4H5 51 aa8.36□□□□□ -1.07
PRPF8-215ENST00000576958 C15orf53Q8NAA6 179 aa8.36□□□□□ -1.07
PRPF8-215ENST00000576958 ZBTB8BQ8NAP8 495 aaPredicted RBP8.36□□□□□ -1.07
PRPF8-215ENST00000576958 HIGD1AQ9Y241 93 aa8.36□□□□□ -1.07
PRPF8-215ENST00000576958 LINC00854A0A1B0GVQ3 168 aa8.35□□□□□ -1.07
PRPF8-215ENST00000576958 DUXBA0A1W2PPF3 345 aa8.35□□□□□ -1.07
PRPF8-215ENST00000576958 DUSP14O95147 198 aaKnown RBP8.35□□□□□ -1.07
PRPF8-215ENST00000576958 IL5P05113 134 aa8.35□□□□□ -1.07
PRPF8-215ENST00000576958 METTL15P1P0C7V9 234 aa8.35□□□□□ -1.07
PRPF8-215ENST00000576958 SLC25A6P12236 298 aa8.35□□□□□ -1.07
PRPF8-215ENST00000576958 TMBIM6P55061 237 aa8.35□□□□□ -1.07
PRPF8-215ENST00000576958 PSG3Q16557 428 aa8.35□□□□□ -1.07
PRPF8-215ENST00000576958 SSX7Q7RTT5 188 aa8.35□□□□□ -1.07
PRPF8-215ENST00000576958 TMEM144Q7Z5S9 345 aa8.35□□□□□ -1.07
PRPF8-215ENST00000576958 SPATA12Q7Z6I5 190 aa8.35□□□□□ -1.07
PRPF8-215ENST00000576958 OR4D5Q8NGN0 318 aa8.35□□□□□ -1.07
PRPF8-215ENST00000576958 RNASE8Q8TDE3 154 aaKnown RBP8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms