RNA–Protein interactions for RNA: ENST00000576218.5

SMG6-220, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-220ENST00000576218 Q6ZRG5 221 aa11.19□□□□□ -0.62
SMG6-220ENST00000576218 TMEM252Q8N6L7 170 aa11.19□□□□□ -0.62
SMG6-220ENST00000576218 UHRF2Q96PU4 802 aa11.19□□□□□ -0.62
SMG6-220ENST00000576218 SHANK2-AS3Q9BTD1 123 aa11.19□□□□□ -0.62
SMG6-220ENST00000576218 NMES1Q9C002 83 aa11.19□□□□□ -0.62
SMG6-220ENST00000576218 SLC25A31Q9H0C2 315 aa11.19□□□□□ -0.62
SMG6-220ENST00000576218 ARV1Q9H2C2 271 aa11.19□□□□□ -0.62
SMG6-220ENST00000576218 IGSF23A1L1A6 192 aa11.18□□□□□ -0.62
SMG6-220ENST00000576218 E5RGE8 158 aa11.18□□□□□ -0.62
SMG6-220ENST00000576218 IGKV3-20P01619 116 aa11.18□□□□□ -0.62
SMG6-220ENST00000576218 PET100P0DJ07 73 aa11.18□□□□□ -0.62
SMG6-220ENST00000576218 OR4B1Q8NGF8 309 aa11.18□□□□□ -0.62
SMG6-220ENST00000576218 MGST2Q99735 147 aa11.18□□□□□ -0.62
SMG6-220ENST00000576218 C1QTNF4Q9BXJ3 329 aa11.18□□□□□ -0.62
SMG6-220ENST00000576218 RPRMQ9NS64 109 aa11.18□□□□□ -0.62
SMG6-220ENST00000576218 HLA-DRB4P13762 266 aa11.17□□□□□ -0.62
SMG6-220ENST00000576218 FGF7P21781 194 aa11.17□□□□□ -0.62
SMG6-220ENST00000576218 PLP1P60201 277 aa11.17□□□□□ -0.62
SMG6-220ENST00000576218 IL15RAQ13261 267 aa11.17□□□□□ -0.62
SMG6-220ENST00000576218 ATP6V1FQ16864 119 aa11.17□□□□□ -0.62
SMG6-220ENST00000576218 FOXI2Q6ZQN5 318 aa11.17□□□□□ -0.62
SMG6-220ENST00000576218 CLEC5AQ9NY25 188 aa11.17□□□□□ -0.62
SMG6-220ENST00000576218 HLA-DRB4X5D2U9 266 aa11.17□□□□□ -0.62
SMG6-220ENST00000576218 H3BMM0 161 aa11.16□□□□□ -0.62
SMG6-220ENST00000576218 C4BPBP20851 252 aa11.16□□□□□ -0.62
SMG6-220ENST00000576218 C10orf113Q5VZT2 155 aa11.16□□□□□ -0.62
SMG6-220ENST00000576218 LINC00305Q7Z4B0 112 aa11.16□□□□□ -0.62
SMG6-220ENST00000576218 OR1L4Q8NGR5 311 aa11.16□□□□□ -0.62
SMG6-220ENST00000576218 SAV1Q9H4B6 383 aaPredicted RBP11.16□□□□□ -0.62
SMG6-220ENST00000576218 C11orf1Q9H5F2 150 aa11.16□□□□□ -0.62
SMG6-220ENST00000576218 ELOA3CA0A087WX78 387 aaPredicted RBP11.15□□□□□ -0.62
SMG6-220ENST00000576218 SOCS3O14543 225 aa11.15□□□□□ -0.62
SMG6-220ENST00000576218 PTTG1O95997 202 aa11.15□□□□□ -0.62
SMG6-220ENST00000576218 DEFB1P60022 68 aa11.15□□□□□ -0.62
SMG6-220ENST00000576218 SPATA31B1PQ5VZV4 182 aa11.15□□□□□ -0.62
SMG6-220ENST00000576218 MIC13Q5XKP0 118 aa11.15□□□□□ -0.62
SMG6-220ENST00000576218 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.15□□□□□ -0.62
SMG6-220ENST00000576218 ZNF738Q8NE65 137 aa11.15□□□□□ -0.62
SMG6-220ENST00000576218 PPP1R1CQ8WVI7 109 aa11.15□□□□□ -0.62
SMG6-220ENST00000576218 PFDN5Q99471 154 aa11.15□□□□□ -0.62
SMG6-220ENST00000576218 XCL2Q9UBD3 114 aa11.15□□□□□ -0.62
SMG6-220ENST00000576218 WDR83OSQ9Y284 106 aa11.15□□□□□ -0.62
SMG6-220ENST00000576218 AGRNO00468 2067 aa11.14□□□□□ -0.63
SMG6-220ENST00000576218 DEFB4AO15263 64 aa11.14□□□□□ -0.63
SMG6-220ENST00000576218 JTBO76095 146 aa11.14□□□□□ -0.63
SMG6-220ENST00000576218 H2BFSP57053 126 aa11.14□□□□□ -0.63
SMG6-220ENST00000576218 FXYD7P58549 80 aa11.14□□□□□ -0.63
SMG6-220ENST00000576218 B2MP61769 119 aa11.14□□□□□ -0.63
SMG6-220ENST00000576218 EWSR1Q01844 656 aaKnown RBP eCLIP11.14□□□□□ -0.63
SMG6-220ENST00000576218 CLINT1Q14677 625 aa11.14□□□□□ -0.63
SMG6-220ENST00000576218 GDF5OSQ5U4N7 250 aa11.14□□□□□ -0.63
SMG6-220ENST00000576218 BPIFA4PQ86YQ2 179 aa11.14□□□□□ -0.63
SMG6-220ENST00000576218 OR5C1Q8NGR4 320 aa11.14□□□□□ -0.63
SMG6-220ENST00000576218 OR5AC2Q9NZP5 309 aa11.14□□□□□ -0.63
SMG6-220ENST00000576218 F6UB75 175 aa11.13□□□□□ -0.63
SMG6-220ENST00000576218 MPDU1O75352 247 aa11.13□□□□□ -0.63
SMG6-220ENST00000576218 NHLH2Q02577 135 aa11.13□□□□□ -0.63
SMG6-220ENST00000576218 VWC2Q2TAL6 325 aa11.13□□□□□ -0.63
SMG6-220ENST00000576218 FAM78BQ5VT40 261 aa11.13□□□□□ -0.63
SMG6-220ENST00000576218 PATE2Q6UY27 113 aa11.13□□□□□ -0.63
SMG6-220ENST00000576218 RNF182Q8N6D2 247 aa11.13□□□□□ -0.63
SMG6-220ENST00000576218 ZNF709Q8N972 641 aa11.13□□□□□ -0.63
SMG6-220ENST00000576218 THAP6Q8TBB0 222 aa11.13□□□□□ -0.63
SMG6-220ENST00000576218 C11orf68Q9H3H3 251 aaKnown RBP11.13□□□□□ -0.63
SMG6-220ENST00000576218 DNAJC4Q9NNZ3 241 aa11.13□□□□□ -0.63
SMG6-220ENST00000576218 SLC39A9Q9NUM3 307 aa11.13□□□□□ -0.63
SMG6-220ENST00000576218 PPP1R14DQ9NXH3 145 aa11.13□□□□□ -0.63
SMG6-220ENST00000576218 ALG5Q9Y673 324 aa11.13□□□□□ -0.63
SMG6-220ENST00000576218 IGHV3OR16-12A0A075B7B8 117 aa11.12□□□□□ -0.63
SMG6-220ENST00000576218 NUPR2A6NF83 97 aa11.12□□□□□ -0.63
SMG6-220ENST00000576218 MIFP14174 115 aa11.12□□□□□ -0.63
SMG6-220ENST00000576218 PSG9Q00887 426 aa11.12□□□□□ -0.63
SMG6-220ENST00000576218 IGFL4Q6B9Z1 124 aa11.12□□□□□ -0.63
SMG6-220ENST00000576218 C11orf45Q8TAV5 145 aa11.12□□□□□ -0.63
SMG6-220ENST00000576218 C20orf173Q96LM9 149 aa11.12□□□□□ -0.63
SMG6-220ENST00000576218 MFFQ9GZY8 342 aa11.12□□□□□ -0.63
SMG6-220ENST00000576218 KCNIP2Q9NS61 270 aa11.12□□□□□ -0.63
SMG6-220ENST00000576218 PXMP4Q9Y6I8 212 aa11.12□□□□□ -0.63
SMG6-220ENST00000576218 A0A0J9YX75 114 aa11.11□□□□□ -0.63
SMG6-220ENST00000576218 DUSP14O95147 198 aaKnown RBP11.11□□□□□ -0.63
SMG6-220ENST00000576218 MPC2O95563 127 aa11.11□□□□□ -0.63
SMG6-220ENST00000576218 GIG44P09565 113 aaPredicted RBP11.11□□□□□ -0.63
SMG6-220ENST00000576218 RPL29P47914 159 aaKnown RBP11.11□□□□□ -0.63
SMG6-220ENST00000576218 OPCMLQ14982 345 aa11.11□□□□□ -0.63
SMG6-220ENST00000576218 LCN15Q6UWW0 184 aa11.11□□□□□ -0.63
SMG6-220ENST00000576218 TMEM37Q8WXS4 190 aa11.11□□□□□ -0.63
SMG6-220ENST00000576218 NPCDR1Q9BY65 106 aa11.11□□□□□ -0.63
SMG6-220ENST00000576218 MED28Q9H204 178 aa11.11□□□□□ -0.63
SMG6-220ENST00000576218 A0A087X0K7 114 aa11.1□□□□□ -0.63
SMG6-220ENST00000576218 IGHV4-28A0A0C4DH34 117 aa11.1□□□□□ -0.63
SMG6-220ENST00000576218 C17orf112F2Z3M2 114 aa11.1□□□□□ -0.63
SMG6-220ENST00000576218 SNRPCP09234 159 aaKnown RBP11.1□□□□□ -0.63
SMG6-220ENST00000576218 CXCL2P19875 107 aa11.1□□□□□ -0.63
SMG6-220ENST00000576218 HIST1H1AQ02539 215 aaPredicted RBP11.1□□□□□ -0.63
SMG6-220ENST00000576218 SLC50A1Q9BRV3 221 aa11.1□□□□□ -0.63
SMG6-220ENST00000576218 TMEM208Q9BTX3 173 aa11.1□□□□□ -0.63
SMG6-220ENST00000576218 MBD2Q9UBB5 411 aa11.1□□□□□ -0.63
SMG6-220ENST00000576218 KLK5Q9Y337 293 aaPredicted RBP11.1□□□□□ -0.63
SMG6-220ENST00000576218 GOLT1BQ9Y3E0 138 aa11.1□□□□□ -0.63
SMG6-220ENST00000576218 H0YIZ8 118 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms