RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 WFDC3Q8IUB2 231 aa10.48□□□□□ -0.73
RPAIN-217ENST00000575711 HYLS1Q96M11 299 aa10.48□□□□□ -0.73
RPAIN-217ENST00000575711 GPR82Q96P67 336 aa10.48□□□□□ -0.73
RPAIN-217ENST00000575711 SLC25A32Q9H2D1 315 aa10.48□□□□□ -0.73
RPAIN-217ENST00000575711 KANTRA0A1W2PQU2 76 aa10.47□□□□□ -0.73
RPAIN-217ENST00000575711 CD7P09564 240 aa10.47□□□□□ -0.73
RPAIN-217ENST00000575711 RPL7P18124 248 aaKnown RBP10.47□□□□□ -0.73
RPAIN-217ENST00000575711 CXCL2P19875 107 aa10.47□□□□□ -0.73
RPAIN-217ENST00000575711 ZFP69Q49AA0 526 aa10.47□□□□□ -0.73
RPAIN-217ENST00000575711 PSMG3Q9BT73 122 aaPredicted RBP10.47□□□□□ -0.73
RPAIN-217ENST00000575711 K7EIL1 84 aa10.46□□□□□ -0.73
RPAIN-217ENST00000575711 BCL2L11O43521 198 aa10.46□□□□□ -0.73
RPAIN-217ENST00000575711 PFDN1O60925 122 aa10.46□□□□□ -0.73
RPAIN-217ENST00000575711 ATP6V0CP27449 155 aa10.46□□□□□ -0.73
RPAIN-217ENST00000575711 CD300CQ08708 224 aa10.46□□□□□ -0.73
RPAIN-217ENST00000575711 GCSAMLQ5JQS6 135 aa10.46□□□□□ -0.73
RPAIN-217ENST00000575711 FAM78BQ5VT40 261 aa10.46□□□□□ -0.73
RPAIN-217ENST00000575711 GNPNAT1Q96EK6 184 aaPredicted RBP10.46□□□□□ -0.73
RPAIN-217ENST00000575711 NRN1Q9NPD7 142 aa10.46□□□□□ -0.73
RPAIN-217ENST00000575711 CYTL1Q9NRR1 136 aa10.46□□□□□ -0.73
RPAIN-217ENST00000575711 DNAH3Q8TD57 4116 aa10.45□□□□□ -0.74
RPAIN-217ENST00000575711 K7EQG2 157 aa10.45□□□□□ -0.74
RPAIN-217ENST00000575711 ATF4P18848 351 aaPredicted RBP10.45□□□□□ -0.74
RPAIN-217ENST00000575711 CMC4P56277 68 aaPredicted RBP10.45□□□□□ -0.74
RPAIN-217ENST00000575711 ACOT6Q3I5F7 207 aaPredicted RBP10.45□□□□□ -0.74
RPAIN-217ENST00000575711 MORN5Q5VZ52 161 aa10.45□□□□□ -0.74
RPAIN-217ENST00000575711 TMUB2Q71RG4 321 aa10.45□□□□□ -0.74
RPAIN-217ENST00000575711 BPIFA4PQ86YQ2 179 aa10.45□□□□□ -0.74
RPAIN-217ENST00000575711 Q8N1Y9 231 aa10.45□□□□□ -0.74
RPAIN-217ENST00000575711 MRAPQ8TCY5 172 aa10.45□□□□□ -0.74
RPAIN-217ENST00000575711 DCANP1Q8TF63 244 aa10.45□□□□□ -0.74
RPAIN-217ENST00000575711 MRPL32Q9BYC8 188 aaKnown RBP10.45□□□□□ -0.74
RPAIN-217ENST00000575711 RFNGQ9Y644 331 aa10.45□□□□□ -0.74
RPAIN-217ENST00000575711 OR11H12B2RN74 326 aa10.44□□□□□ -0.74
RPAIN-217ENST00000575711 M6PRP20645 277 aa10.44□□□□□ -0.74
RPAIN-217ENST00000575711 MEOX2P50222 304 aa10.44□□□□□ -0.74
RPAIN-217ENST00000575711 SERF2P84101 59 aa10.44□□□□□ -0.74
RPAIN-217ENST00000575711 SAMD13Q5VXD3 122 aa10.44□□□□□ -0.74
RPAIN-217ENST00000575711 DMRTA1Q5VZB9 504 aa10.44□□□□□ -0.74
RPAIN-217ENST00000575711 OR2G3Q8NGZ4 309 aa10.44□□□□□ -0.74
RPAIN-217ENST00000575711 ZNF471Q9BX82 626 aaPredicted RBP10.44□□□□□ -0.74
RPAIN-217ENST00000575711 SH3BGRL3Q9H299 93 aa10.44□□□□□ -0.74
RPAIN-217ENST00000575711 SEPSECSQ9HD40 501 aaKnown RBP10.44□□□□□ -0.74
RPAIN-217ENST00000575711 UBQLN2Q9UHD9 624 aa10.44□□□□□ -0.74
RPAIN-217ENST00000575711 SMAD5-AS1Q9Y6J3 95 aa10.44□□□□□ -0.74
RPAIN-217ENST00000575711 TRAV5A0A0B4J249 113 aa10.43□□□□□ -0.74
RPAIN-217ENST00000575711 MBP02144 154 aa10.43□□□□□ -0.74
RPAIN-217ENST00000575711 SNRPD3P62318 126 aaKnown RBP10.43□□□□□ -0.74
RPAIN-217ENST00000575711 RHOBP62745 196 aa10.43□□□□□ -0.74
RPAIN-217ENST00000575711 EIF5AP63241 154 aaKnown RBP10.43□□□□□ -0.74
RPAIN-217ENST00000575711 LGALSLQ3ZCW2 172 aaPredicted RBP10.43□□□□□ -0.74
RPAIN-217ENST00000575711 DEFB121Q5J5C9 76 aa10.43□□□□□ -0.74
RPAIN-217ENST00000575711 MIR17HGQ75NE6 70 aa10.43□□□□□ -0.74
RPAIN-217ENST00000575711 FAM110AQ9BQ89 295 aa10.43□□□□□ -0.74
RPAIN-217ENST00000575711 FUT9Q9Y231 359 aa10.43□□□□□ -0.74
RPAIN-217ENST00000575711 SORL1Q92673 2214 aa10.42□□□□□ -0.74
RPAIN-217ENST00000575711 NOTCH1P46531 2555 aa10.42□□□□□ -0.74
RPAIN-217ENST00000575711 A0A087X0K7 114 aa10.42□□□□□ -0.74
RPAIN-217ENST00000575711 A0A1W2PPV4 95 aa10.42□□□□□ -0.74
RPAIN-217ENST00000575711 MRPS12O15235 138 aaKnown RBP10.42□□□□□ -0.74
RPAIN-217ENST00000575711 ZNF688P0C7X2 276 aa10.42□□□□□ -0.74
RPAIN-217ENST00000575711 C4BPBP20851 252 aa10.42□□□□□ -0.74
RPAIN-217ENST00000575711 ID1P41134 155 aa10.42□□□□□ -0.74
RPAIN-217ENST00000575711 ODF3L2Q3SX64 289 aa10.42□□□□□ -0.74
RPAIN-217ENST00000575711 SPATA31B1PQ5VZV4 182 aa10.42□□□□□ -0.74
RPAIN-217ENST00000575711 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.42□□□□□ -0.74
RPAIN-217ENST00000575711 FAM24BQ8N5W8 94 aa10.42□□□□□ -0.74
RPAIN-217ENST00000575711 DEFB125Q8N687 156 aa10.42□□□□□ -0.74
RPAIN-217ENST00000575711 OR10G4Q8NGN3 311 aa10.42□□□□□ -0.74
RPAIN-217ENST00000575711 OR10G9Q8NGN4 311 aa10.42□□□□□ -0.74
RPAIN-217ENST00000575711 OR10G7Q8NGN6 311 aa10.42□□□□□ -0.74
RPAIN-217ENST00000575711 C16orf92Q96LL3 132 aa10.42□□□□□ -0.74
RPAIN-217ENST00000575711 WFDC10AQ9H1F0 79 aa10.42□□□□□ -0.74
RPAIN-217ENST00000575711 TUBA4BQ9H853 241 aa10.42□□□□□ -0.74
RPAIN-217ENST00000575711 MAP6D1Q9H9H5 199 aa10.42□□□□□ -0.74
RPAIN-217ENST00000575711 C19orf73Q9NVV2 129 aa10.42□□□□□ -0.74
RPAIN-217ENST00000575711 NBEAL1Q6ZS30 2694 aa10.42□□□□□ -0.74
RPAIN-217ENST00000575711 SOCS3O14543 225 aa10.41□□□□□ -0.74
RPAIN-217ENST00000575711 IGHV4-30-4P0DP06 118 aa10.41□□□□□ -0.74
RPAIN-217ENST00000575711 PSMB3P49720 205 aa10.41□□□□□ -0.74
RPAIN-217ENST00000575711 TAS2R45P59539 299 aa10.41□□□□□ -0.74
RPAIN-217ENST00000575711 DEFB131AP59861 70 aa10.41□□□□□ -0.74
RPAIN-217ENST00000575711 RAB2AP61019 212 aa10.41□□□□□ -0.74
RPAIN-217ENST00000575711 FAM122CQ6P4D5 195 aa10.41□□□□□ -0.74
RPAIN-217ENST00000575711 LRRC20Q8TCA0 184 aa10.41□□□□□ -0.74
RPAIN-217ENST00000575711 SLC25A2Q9BXI2 301 aa10.41□□□□□ -0.74
RPAIN-217ENST00000575711 TMEM14CQ9P0S9 112 aa10.41□□□□□ -0.74
RPAIN-217ENST00000575711 ISLRO14498 428 aa10.4□□□□□ -0.74
RPAIN-217ENST00000575711 IGLC2P0DOY2 106 aa10.4□□□□□ -0.74
RPAIN-217ENST00000575711 SPP1P10451 314 aa10.4□□□□□ -0.74
RPAIN-217ENST00000575711 TPT1P13693 172 aaKnown RBP10.4□□□□□ -0.74
RPAIN-217ENST00000575711 KHDC3LQ587J8 217 aa10.4□□□□□ -0.74
RPAIN-217ENST00000575711 TMEM41BQ5BJD5 291 aa10.4□□□□□ -0.74
RPAIN-217ENST00000575711 PSMG4Q5JS54 123 aa10.4□□□□□ -0.74
RPAIN-217ENST00000575711 AKR1C8PQ5T2L2 129 aa10.4□□□□□ -0.74
RPAIN-217ENST00000575711 LCN15Q6UWW0 184 aa10.4□□□□□ -0.74
RPAIN-217ENST00000575711 C9orf62Q8N4C0 152 aa10.4□□□□□ -0.74
RPAIN-217ENST00000575711 HRH4Q9H3N8 390 aa10.4□□□□□ -0.74
RPAIN-217ENST00000575711 SRD5A3Q9H8P0 318 aa10.4□□□□□ -0.74
RPAIN-217ENST00000575711 A8MZ25 164 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms