RNA–Protein interactions for RNA: ENST00000575431.1

CCDC40-214, Transcript of coiled-coil domain containing 40, humanhuman

TSL 3

Gene CCDC40, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-214ENST00000575431 ATF4P18848 351 aaPredicted RBP7.11□□□□□ -1.27
CCDC40-214ENST00000575431 PSMB3P49720 205 aa7.11□□□□□ -1.27
CCDC40-214ENST00000575431 DEFB131AP59861 70 aa7.11□□□□□ -1.27
CCDC40-214ENST00000575431 Q5BKY6 102 aa7.11□□□□□ -1.27
CCDC40-214ENST00000575431 BPIFA4PQ86YQ2 179 aa7.11□□□□□ -1.27
CCDC40-214ENST00000575431 TMEM37Q8WXS4 190 aa7.11□□□□□ -1.27
CCDC40-214ENST00000575431 UHRF2Q96PU4 802 aa7.11□□□□□ -1.27
CCDC40-214ENST00000575431 SCRT1Q9BWW7 348 aa7.11□□□□□ -1.27
CCDC40-214ENST00000575431 SMIM3Q9BZL3 60 aa7.11□□□□□ -1.27
CCDC40-214ENST00000575431 SLC25A32Q9H2D1 315 aa7.11□□□□□ -1.27
CCDC40-214ENST00000575431 UBQLN2Q9UHD9 624 aa7.11□□□□□ -1.27
CCDC40-214ENST00000575431 TIMM9Q9Y5J7 89 aa7.11□□□□□ -1.27
CCDC40-214ENST00000575431 BORCS7-ASMTA0A0B4J1R7 106 aa7.1□□□□□ -1.27
CCDC40-214ENST00000575431 KIR2DL5BA0A0G2JN68 375 aa7.1□□□□□ -1.27
CCDC40-214ENST00000575431 KIR2DL5BA0A0G2JPC4 375 aa7.1□□□□□ -1.27
CCDC40-214ENST00000575431 UBE2CO00762 179 aa7.1□□□□□ -1.27
CCDC40-214ENST00000575431 TAAR5O14804 337 aa7.1□□□□□ -1.27
CCDC40-214ENST00000575431 ZNF688P0C7X2 276 aa7.1□□□□□ -1.27
CCDC40-214ENST00000575431 APOC4P55056 127 aa7.1□□□□□ -1.27
CCDC40-214ENST00000575431 SBSPONQ8IVN8 264 aa7.1□□□□□ -1.27
CCDC40-214ENST00000575431 KIR2DL5AQ8N109 375 aa7.1□□□□□ -1.27
CCDC40-214ENST00000575431 KIR2DL5BQ8NHK3 375 aa7.1□□□□□ -1.27
CCDC40-214ENST00000575431 RSG1Q9BU20 258 aa7.1□□□□□ -1.27
CCDC40-214ENST00000575431 MRPL32Q9BYC8 188 aaKnown RBP7.1□□□□□ -1.27
CCDC40-214ENST00000575431 ZMAT4Q9H898 229 aa7.1□□□□□ -1.27
CCDC40-214ENST00000575431 CLEC5AQ9NY25 188 aa7.1□□□□□ -1.27
CCDC40-214ENST00000575431 A0A087X0K7 114 aa7.09□□□□□ -1.27
CCDC40-214ENST00000575431 RNF222A6NCQ9 220 aa7.09□□□□□ -1.27
CCDC40-214ENST00000575431 RBMY1BA6NDE4 496 aaKnown RBP7.09□□□□□ -1.27
CCDC40-214ENST00000575431 RBMY1EA6NEQ0 496 aaKnown RBP7.09□□□□□ -1.27
CCDC40-214ENST00000575431 HMSDA8MTL9 139 aa7.09□□□□□ -1.27
CCDC40-214ENST00000575431 G3V3Q6 166 aa7.09□□□□□ -1.27
CCDC40-214ENST00000575431 ARPC5O15511 151 aa7.09□□□□□ -1.27
CCDC40-214ENST00000575431 RBMY1DP0C7P1 496 aaKnown RBP7.09□□□□□ -1.27
CCDC40-214ENST00000575431 CXCL2P19875 107 aa7.09□□□□□ -1.27
CCDC40-214ENST00000575431 ZNF345Q14585 488 aa7.09□□□□□ -1.27
CCDC40-214ENST00000575431 GUK1Q16774 197 aa7.09□□□□□ -1.27
CCDC40-214ENST00000575431 HAGHQ16775 308 aa7.09□□□□□ -1.27
CCDC40-214ENST00000575431 PSMG4Q5JS54 123 aa7.09□□□□□ -1.27
CCDC40-214ENST00000575431 SPATA31B1PQ5VZV4 182 aa7.09□□□□□ -1.27
CCDC40-214ENST00000575431 APRG1Q8IVJ8 170 aa7.09□□□□□ -1.27
CCDC40-214ENST00000575431 C16orf92Q96LL3 132 aa7.09□□□□□ -1.27
CCDC40-214ENST00000575431 SPATA25Q9BR10 227 aa7.09□□□□□ -1.27
CCDC40-214ENST00000575431 PSMG3Q9BT73 122 aaPredicted RBP7.09□□□□□ -1.27
CCDC40-214ENST00000575431 MFFQ9GZY8 342 aa7.09□□□□□ -1.27
CCDC40-214ENST00000575431 WFDC10AQ9H1F0 79 aa7.09□□□□□ -1.27
CCDC40-214ENST00000575431 TMEM14CQ9P0S9 112 aa7.09□□□□□ -1.27
CCDC40-214ENST00000575431 A0A0D9SG52 128 aa7.08□□□□□ -1.28
CCDC40-214ENST00000575431 SOCS3O14543 225 aa7.08□□□□□ -1.28
CCDC40-214ENST00000575431 JTBO76095 146 aa7.08□□□□□ -1.28
CCDC40-214ENST00000575431 SERF2P84101 59 aa7.08□□□□□ -1.28
CCDC40-214ENST00000575431 ACOT6Q3I5F7 207 aaPredicted RBP7.08□□□□□ -1.28
CCDC40-214ENST00000575431 TMEM41BQ5BJD5 291 aa7.08□□□□□ -1.28
CCDC40-214ENST00000575431 FFAR4Q5NUL3 377 aa7.08□□□□□ -1.28
CCDC40-214ENST00000575431 FAM78BQ5VT40 261 aa7.08□□□□□ -1.28
CCDC40-214ENST00000575431 LEMD1Q68G75 181 aa7.08□□□□□ -1.28
CCDC40-214ENST00000575431 LCN15Q6UWW0 184 aa7.08□□□□□ -1.28
CCDC40-214ENST00000575431 STHQ8IWL8 128 aa7.08□□□□□ -1.28
CCDC40-214ENST00000575431 FAM24BQ8N5W8 94 aa7.08□□□□□ -1.28
CCDC40-214ENST00000575431 LRRC20Q8TCA0 184 aa7.08□□□□□ -1.28
CCDC40-214ENST00000575431 GNPNAT1Q96EK6 184 aaPredicted RBP7.08□□□□□ -1.28
CCDC40-214ENST00000575431 LINC00052Q96N35 136 aa7.08□□□□□ -1.28
CCDC40-214ENST00000575431 CITED4Q96RK1 184 aa7.08□□□□□ -1.28
CCDC40-214ENST00000575431 ASCL2Q99929 193 aa7.08□□□□□ -1.28
CCDC40-214ENST00000575431 TM2D3Q9BRN9 247 aa7.08□□□□□ -1.28
CCDC40-214ENST00000575431 SLC50A1Q9BRV3 221 aa7.08□□□□□ -1.28
CCDC40-214ENST00000575431 HRH4Q9H3N8 390 aa7.08□□□□□ -1.28
CCDC40-214ENST00000575431 WFDC1Q9HC57 220 aa7.08□□□□□ -1.28
CCDC40-214ENST00000575431 RPRMQ9NS64 109 aa7.08□□□□□ -1.28
CCDC40-214ENST00000575431 MRPS12O15235 138 aaKnown RBP7.07□□□□□ -1.28
CCDC40-214ENST00000575431 MBP02144 154 aa7.07□□□□□ -1.28
CCDC40-214ENST00000575431 SPP1P10451 314 aa7.07□□□□□ -1.28
CCDC40-214ENST00000575431 TAS2R45P59539 299 aa7.07□□□□□ -1.28
CCDC40-214ENST00000575431 NUTF2P61970 127 aaKnown RBP7.07□□□□□ -1.28
CCDC40-214ENST00000575431 RHOBP62745 196 aa7.07□□□□□ -1.28
CCDC40-214ENST00000575431 EBLN2Q6P2I7 272 aa7.07□□□□□ -1.28
CCDC40-214ENST00000575431 MORN3Q6PF18 240 aaPredicted RBP7.07□□□□□ -1.28
CCDC40-214ENST00000575431 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.07□□□□□ -1.28
CCDC40-214ENST00000575431 FOXI2Q6ZQN5 318 aa7.07□□□□□ -1.28
CCDC40-214ENST00000575431 Q6ZWC4 215 aa7.07□□□□□ -1.28
CCDC40-214ENST00000575431 TCTE3Q8IZS6 198 aa7.07□□□□□ -1.28
CCDC40-214ENST00000575431 OR2G3Q8NGZ4 309 aa7.07□□□□□ -1.28
CCDC40-214ENST00000575431 CLUHP3Q96NS8 147 aa7.07□□□□□ -1.28
CCDC40-214ENST00000575431 CSTL1Q9H114 145 aa7.07□□□□□ -1.28
CCDC40-214ENST00000575431 FUT9Q9Y231 359 aa7.07□□□□□ -1.28
CCDC40-214ENST00000575431 A0A1W2PPV4 95 aa7.06□□□□□ -1.28
CCDC40-214ENST00000575431 ZNF253O75346 499 aa7.06□□□□□ -1.28
CCDC40-214ENST00000575431 IGLC2P0DOY2 106 aa7.06□□□□□ -1.28
CCDC40-214ENST00000575431 HIST1H1EP10412 219 aaKnown RBP7.06□□□□□ -1.28
CCDC40-214ENST00000575431 HLA-DRB4P13762 266 aa7.06□□□□□ -1.28
CCDC40-214ENST00000575431 M6PRP20645 277 aa7.06□□□□□ -1.28
CCDC40-214ENST00000575431 EIF5AP63241 154 aaKnown RBP7.06□□□□□ -1.28
CCDC40-214ENST00000575431 PDE6HQ13956 83 aa7.06□□□□□ -1.28
CCDC40-214ENST00000575431 ACTL10Q5JWF8 245 aa7.06□□□□□ -1.28
CCDC40-214ENST00000575431 TRPT1Q86TN4 253 aaKnown RBP7.06□□□□□ -1.28
CCDC40-214ENST00000575431 KCNRGQ8N5I3 272 aa7.06□□□□□ -1.28
CCDC40-214ENST00000575431 HSD17B11Q8NBQ5 300 aa7.06□□□□□ -1.28
CCDC40-214ENST00000575431 ST6GAL2Q96JF0 529 aa7.06□□□□□ -1.28
CCDC40-214ENST00000575431 ARPC5LQ9BPX5 153 aa7.06□□□□□ -1.28
CCDC40-214ENST00000575431 OR51M1Q9H341 326 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms