RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 ERVK11-1P61568 191 aa7.74□□□□□ -1.17
CCDC40-212ENST00000574799 LYZP61626 148 aa7.74□□□□□ -1.17
CCDC40-212ENST00000574799 ZNF766Q5HY98 468 aa7.74□□□□□ -1.17
CCDC40-212ENST00000574799 NEGR1Q7Z3B1 354 aa7.74□□□□□ -1.17
CCDC40-212ENST00000574799 FAM169BQ8N8A8 192 aa7.74□□□□□ -1.17
CCDC40-212ENST00000574799 PRELID3AQ96N28 172 aa7.74□□□□□ -1.17
CCDC40-212ENST00000574799 ASCL2Q99929 193 aa7.74□□□□□ -1.17
CCDC40-212ENST00000574799 IGKV1OR2-108A0A075B7D4 117 aa7.74□□□□□ -1.17
CCDC40-212ENST00000574799 AGFG2O95081 481 aa7.74□□□□□ -1.17
CCDC40-212ENST00000574799 CKS2P33552 79 aa7.74□□□□□ -1.17
CCDC40-212ENST00000574799 OR1L8Q8NGR8 309 aa7.74□□□□□ -1.17
CCDC40-212ENST00000574799 IFI27L1Q96BM0 104 aa7.74□□□□□ -1.17
CCDC40-212ENST00000574799 SLC25A2Q9BXI2 301 aa7.74□□□□□ -1.17
CCDC40-212ENST00000574799 C1RLQ9NZP8 487 aa7.74□□□□□ -1.17
CCDC40-212ENST00000574799 A0A1W2PRD5 423 aa7.73□□□□□ -1.17
CCDC40-212ENST00000574799 A0A1W2PRF3 423 aa7.73□□□□□ -1.17
CCDC40-212ENST00000574799 A0A1W2PRM7 423 aa7.73□□□□□ -1.17
CCDC40-212ENST00000574799 SAA2P0DJI9 122 aaPredicted RBP7.73□□□□□ -1.17
CCDC40-212ENST00000574799 FOXE3Q13461 319 aa7.73□□□□□ -1.17
CCDC40-212ENST00000574799 GAGE13Q4V321 117 aa7.73□□□□□ -1.17
CCDC40-212ENST00000574799 FAM120AOSQ5T036 256 aa7.73□□□□□ -1.17
CCDC40-212ENST00000574799 HIST1H4GQ99525 98 aa7.73□□□□□ -1.17
CCDC40-212ENST00000574799 NDFIP1Q9BT67 221 aa7.73□□□□□ -1.17
CCDC40-212ENST00000574799 CADP27708 2225 aa7.73□□□□□ -1.17
CCDC40-212ENST00000574799 ARFGEF3Q5TH69 2177 aa7.73□□□□□ -1.17
CCDC40-212ENST00000574799 MGST3O14880 152 aa7.73□□□□□ -1.17
CCDC40-212ENST00000574799 ARMS2P0C7Q2 107 aa7.73□□□□□ -1.17
CCDC40-212ENST00000574799 ATP5G2Q06055 141 aa7.73□□□□□ -1.17
CCDC40-212ENST00000574799 HCP5Q6MZN7 132 aa7.73□□□□□ -1.17
CCDC40-212ENST00000574799 MBD6Q96DN6 1003 aa7.73□□□□□ -1.17
CCDC40-212ENST00000574799 FOXA2Q9Y261 457 aaPredicted RBP7.73□□□□□ -1.17
CCDC40-212ENST00000574799 HCFC1P51610 2035 aa7.73□□□□□ -1.17
CCDC40-212ENST00000574799 VWC2LB2RUY7 222 aa7.73□□□□□ -1.17
CCDC40-212ENST00000574799 GTSF1Q8WW33 167 aa7.73□□□□□ -1.17
CCDC40-212ENST00000574799 MRAP2Q96G30 205 aa7.73□□□□□ -1.17
CCDC40-212ENST00000574799 LOC107984156A0A0G2JMH3 177 aa7.72□□□□□ -1.17
CCDC40-212ENST00000574799 PRSS46E5RG02 174 aa7.72□□□□□ -1.17
CCDC40-212ENST00000574799 APOMO95445 188 aa7.72□□□□□ -1.17
CCDC40-212ENST00000574799 HBDP02042 147 aa7.72□□□□□ -1.17
CCDC40-212ENST00000574799 SPINK8P0C7L1 97 aa7.72□□□□□ -1.17
CCDC40-212ENST00000574799 PRCDQ00LT1 54 aa7.72□□□□□ -1.17
CCDC40-212ENST00000574799 ARL17AQ8IVW1 177 aa7.72□□□□□ -1.17
CCDC40-212ENST00000574799 OR5AN1Q8NGI8 311 aa7.72□□□□□ -1.17
CCDC40-212ENST00000574799 NEU4Q8WWR8 484 aaPredicted RBP7.72□□□□□ -1.17
CCDC40-212ENST00000574799 TTTY13Q9BZ97 58 aa7.72□□□□□ -1.17
CCDC40-212ENST00000574799 Q9H3A6 140 aa7.72□□□□□ -1.17
CCDC40-212ENST00000574799 D6R8Y8 96 aa7.72□□□□□ -1.17
CCDC40-212ENST00000574799 PPIFP30405 207 aaKnown RBP7.72□□□□□ -1.17
CCDC40-212ENST00000574799 CFHR2P36980 270 aa7.72□□□□□ -1.17
CCDC40-212ENST00000574799 IGF2-ASQ6U949 168 aa7.72□□□□□ -1.17
CCDC40-212ENST00000574799 RPRMLQ8N4K4 120 aa7.72□□□□□ -1.17
CCDC40-212ENST00000574799 DYSFO75923 2080 aa7.72□□□□□ -1.17
CCDC40-212ENST00000574799 TMEM238LA0A1B0GVL6 79 aa7.72□□□□□ -1.17
CCDC40-212ENST00000574799 PROP1O75360 226 aa7.72□□□□□ -1.17
CCDC40-212ENST00000574799 IGHG3P01860 377 aa7.72□□□□□ -1.17
CCDC40-212ENST00000574799 ARL3P36405 182 aa7.72□□□□□ -1.17
CCDC40-212ENST00000574799 FXYD2P54710 66 aa7.72□□□□□ -1.17
CCDC40-212ENST00000574799 LCNL1Q6ZST4 164 aa7.72□□□□□ -1.17
CCDC40-212ENST00000574799 SEM1Q6ZVN7 128 aa7.72□□□□□ -1.17
CCDC40-212ENST00000574799 C1orf159Q96HA4 380 aa7.72□□□□□ -1.17
CCDC40-212ENST00000574799 FMC1Q96HJ9 113 aa7.72□□□□□ -1.17
CCDC40-212ENST00000574799 DKK4Q9UBT3 224 aa7.72□□□□□ -1.17
CCDC40-212ENST00000574799 A0A1B0GXF2 115 aa7.71□□□□□ -1.17
CCDC40-212ENST00000574799 UPK2O00526 184 aa7.71□□□□□ -1.17
CCDC40-212ENST00000574799 CEACAM4O75871 244 aa7.71□□□□□ -1.17
CCDC40-212ENST00000574799 MZT1Q08AG7 82 aa7.71□□□□□ -1.17
CCDC40-212ENST00000574799 ZNF418Q8TF45 676 aaPredicted RBP7.71□□□□□ -1.17
CCDC40-212ENST00000574799 CHAC1Q9BUX1 264 aa7.71□□□□□ -1.17
CCDC40-212ENST00000574799 TMEM160Q9NX00 188 aa7.71□□□□□ -1.17
CCDC40-212ENST00000574799 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.71□□□□□ -1.18
CCDC40-212ENST00000574799 K7EM74 188 aa7.71□□□□□ -1.18
CCDC40-212ENST00000574799 SPRY3O43610 288 aa7.71□□□□□ -1.18
CCDC40-212ENST00000574799 ZNF134P52741 427 aa7.71□□□□□ -1.18
CCDC40-212ENST00000574799 TMEM164Q5U3C3 297 aa7.71□□□□□ -1.18
CCDC40-212ENST00000574799 GTSCR1Q86UQ5 136 aa7.71□□□□□ -1.18
CCDC40-212ENST00000574799 TMEM14BQ9NUH8 114 aa7.71□□□□□ -1.18
CCDC40-212ENST00000574799 H3BVH4 76 aa7.71□□□□□ -1.18
CCDC40-212ENST00000574799 C10orf55Q5SWW7 151 aa7.71□□□□□ -1.18
CCDC40-212ENST00000574799 LINC00322Q6ZN03 302 aaPredicted RBP7.71□□□□□ -1.18
CCDC40-212ENST00000574799 ORMDL3Q8N138 153 aa7.71□□□□□ -1.18
CCDC40-212ENST00000574799 CSMD2Q7Z408 3487 aa7.7□□□□□ -1.18
CCDC40-212ENST00000574799 TCRAP04437 139 aa7.7□□□□□ -1.18
CCDC40-212ENST00000574799 SAA1P0DJI8 122 aaPredicted RBP7.7□□□□□ -1.18
CCDC40-212ENST00000574799 EIF4EBP1Q13541 118 aaPredicted RBP7.7□□□□□ -1.18
CCDC40-212ENST00000574799 FAM201AQ5SY85 155 aa7.7□□□□□ -1.18
CCDC40-212ENST00000574799 CCDC144NLQ6NUI1 221 aa7.7□□□□□ -1.18
CCDC40-212ENST00000574799 MOGAT3Q86VF5 341 aa7.7□□□□□ -1.18
CCDC40-212ENST00000574799 BOD1L2Q8IYS8 172 aa7.7□□□□□ -1.18
CCDC40-212ENST00000574799 CD177Q8N6Q3 437 aa7.7□□□□□ -1.18
CCDC40-212ENST00000574799 CACNG8Q8WXS5 425 aa7.7□□□□□ -1.18
CCDC40-212ENST00000574799 FAM167A-AS1Q96KT0 104 aa7.7□□□□□ -1.18
CCDC40-212ENST00000574799 ANAPC13Q9BS18 74 aa7.7□□□□□ -1.18
CCDC40-212ENST00000574799 RBP4P02753 201 aa7.7□□□□□ -1.18
CCDC40-212ENST00000574799 IGKV1-16P04430 117 aa7.7□□□□□ -1.18
CCDC40-212ENST00000574799 SSBP2P81877 361 aaPredicted RBP7.7□□□□□ -1.18
CCDC40-212ENST00000574799 RNASE2P10153 161 aaKnown RBP7.7□□□□□ -1.18
CCDC40-212ENST00000574799 IGHV1-2P23083 117 aa7.7□□□□□ -1.18
CCDC40-212ENST00000574799 TWIST1Q15672 202 aa7.7□□□□□ -1.18
CCDC40-212ENST00000574799 C2orf83Q53S99 150 aa7.7□□□□□ -1.18
CCDC40-212ENST00000574799 SLC25A48Q6ZT89 311 aaKnown RBP7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms