RNA–Protein interactions for RNA: ENST00000574776.5

CTNS-209, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 4

Gene CTNS, Length 565 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-209ENST00000574776 OR4D5Q8NGN0 318 aa10.79□□□□□ -0.68
CTNS-209ENST00000574776 IGF2BP2-AS1Q96M15 143 aa10.79□□□□□ -0.68
CTNS-209ENST00000574776 TMEM147Q9BVK8 224 aa10.79□□□□□ -0.68
CTNS-209ENST00000574776 PKD1P98161 4303 aa10.78□□□□□ -0.68
CTNS-209ENST00000574776 A8MTW9 85 aa10.78□□□□□ -0.68
CTNS-209ENST00000574776 ZNF705GA8MUZ8 300 aaPredicted RBP10.78□□□□□ -0.68
CTNS-209ENST00000574776 DAD1P61803 113 aa10.78□□□□□ -0.68
CTNS-209ENST00000574776 AKR1C1Q04828 323 aa10.78□□□□□ -0.68
CTNS-209ENST00000574776 FGL1Q08830 312 aa10.78□□□□□ -0.68
CTNS-209ENST00000574776 TMEM88Q6PEY1 159 aa10.78□□□□□ -0.68
CTNS-209ENST00000574776 STRAPQ9Y3F4 350 aaKnown RBP10.78□□□□□ -0.68
CTNS-209ENST00000574776 V9GYH0 126 aa10.78□□□□□ -0.68
CTNS-209ENST00000574776 TRAV8-2A0A0B4J237 113 aa10.77□□□□□ -0.69
CTNS-209ENST00000574776 CNN1P51911 297 aaKnown RBP10.77□□□□□ -0.69
CTNS-209ENST00000574776 SPINK13Q1W4C9 94 aa10.77□□□□□ -0.69
CTNS-209ENST00000574776 RNF212Q495C1 297 aa10.77□□□□□ -0.69
CTNS-209ENST00000574776 Q6ZR54 194 aa10.77□□□□□ -0.69
CTNS-209ENST00000574776 ACOT7LQ6ZUV0 252 aa10.77□□□□□ -0.69
CTNS-209ENST00000574776 RNF182Q8N6D2 247 aa10.77□□□□□ -0.69
CTNS-209ENST00000574776 OR11H7Q8NGC8 314 aa10.77□□□□□ -0.69
CTNS-209ENST00000574776 GPR82Q96P67 336 aa10.77□□□□□ -0.69
CTNS-209ENST00000574776 SMCO3A2RU48 225 aa10.76□□□□□ -0.69
CTNS-209ENST00000574776 M0R2Z0 102 aa10.76□□□□□ -0.69
CTNS-209ENST00000574776 CRXO43186 299 aaPredicted RBP10.76□□□□□ -0.69
CTNS-209ENST00000574776 ADAP1O75689 374 aa10.76□□□□□ -0.69
CTNS-209ENST00000574776 DUSP14O95147 198 aaKnown RBP10.76□□□□□ -0.69
CTNS-209ENST00000574776 IL5P05113 134 aa10.76□□□□□ -0.69
CTNS-209ENST00000574776 MED14OSP0DP75 135 aa10.76□□□□□ -0.69
CTNS-209ENST00000574776 S100A7P31151 101 aa10.76□□□□□ -0.69
CTNS-209ENST00000574776 POLR2GP62487 172 aaKnown RBP eCLIP10.76□□□□□ -0.69
CTNS-209ENST00000574776 ID3Q02535 119 aa10.76□□□□□ -0.69
CTNS-209ENST00000574776 CYP2G1PQ6ZSU1 146 aa10.76□□□□□ -0.69
CTNS-209ENST00000574776 TMEM144Q7Z5S9 345 aa10.76□□□□□ -0.69
CTNS-209ENST00000574776 SLC25A39Q9BZJ4 359 aaPredicted RBP10.76□□□□□ -0.69
CTNS-209ENST00000574776 DYNC1H1Q14204 4646 aaKnown RBP10.75□□□□□ -0.69
CTNS-209ENST00000574776 S100A5P33763 92 aa10.75□□□□□ -0.69
CTNS-209ENST00000574776 DEDD2Q8WXF8 326 aa10.75□□□□□ -0.69
CTNS-209ENST00000574776 SHANK2-AS3Q9BTD1 123 aa10.75□□□□□ -0.69
CTNS-209ENST00000574776 PSENENQ9NZ42 101 aa10.75□□□□□ -0.69
CTNS-209ENST00000574776 NACAE9PAV3 2078 aa10.75□□□□□ -0.69
CTNS-209ENST00000574776 DNAH11Q96DT5 4516 aa10.75□□□□□ -0.69
CTNS-209ENST00000574776 MUC4Q99102 2169 aa10.75□□□□□ -0.69
CTNS-209ENST00000574776 C9orf170A2RU37 121 aa10.74□□□□□ -0.69
CTNS-209ENST00000574776 H3BRN7 92 aa10.74□□□□□ -0.69
CTNS-209ENST00000574776 HYPMO75409 117 aa10.74□□□□□ -0.69
CTNS-209ENST00000574776 INSP01308 110 aa10.74□□□□□ -0.69
CTNS-209ENST00000574776 DEFB130BP0DP73 79 aa10.74□□□□□ -0.69
CTNS-209ENST00000574776 DEFB130AP0DP74 79 aa10.74□□□□□ -0.69
CTNS-209ENST00000574776 AZU1P20160 251 aa10.74□□□□□ -0.69
CTNS-209ENST00000574776 RAP2BP61225 183 aa10.74□□□□□ -0.69
CTNS-209ENST00000574776 CCDC190Q86UF4 302 aa10.74□□□□□ -0.69
CTNS-209ENST00000574776 ZNF738Q8NE65 137 aa10.74□□□□□ -0.69
CTNS-209ENST00000574776 HIGD1AQ9Y241 93 aa10.74□□□□□ -0.69
CTNS-209ENST00000574776 TRAV12-2A0A075B6T6 113 aa10.73□□□□□ -0.69
CTNS-209ENST00000574776 PMS2P5A8MQ11 134 aa10.73□□□□□ -0.69
CTNS-209ENST00000574776 LYRM9A8MSI8 78 aa10.73□□□□□ -0.69
CTNS-209ENST00000574776 OR5G3P0C626 314 aa10.73□□□□□ -0.69
CTNS-209ENST00000574776 PRB4P10163 310 aaPredicted RBP10.73□□□□□ -0.69
CTNS-209ENST00000574776 RPL7P18124 248 aaKnown RBP10.73□□□□□ -0.69
CTNS-209ENST00000574776 UBE2MP61081 183 aaKnown RBP10.73□□□□□ -0.69
CTNS-209ENST00000574776 FCN2Q15485 313 aa10.73□□□□□ -0.69
CTNS-209ENST00000574776 BAP18Q8IXM2 172 aa10.73□□□□□ -0.69
CTNS-209ENST00000574776 UHRF2Q96PU4 802 aa10.73□□□□□ -0.69
CTNS-209ENST00000574776 CCDC160A6NGH7 325 aa10.72□□□□□ -0.69
CTNS-209ENST00000574776 CCNKO75909 580 aa10.72□□□□□ -0.69
CTNS-209ENST00000574776 LINC00869P0C866 280 aa10.72□□□□□ -0.69
CTNS-209ENST00000574776 B2MP61769 119 aa10.72□□□□□ -0.69
CTNS-209ENST00000574776 RRAS2P62070 204 aaPredicted RBP10.72□□□□□ -0.69
CTNS-209ENST00000574776 RHOBP62745 196 aa10.72□□□□□ -0.69
CTNS-209ENST00000574776 SOHLH1Q5JUK2 328 aa10.72□□□□□ -0.69
CTNS-209ENST00000574776 C1orf134Q5TEV5 83 aa10.72□□□□□ -0.69
CTNS-209ENST00000574776 SMIM8Q96KF7 97 aa10.72□□□□□ -0.69
CTNS-209ENST00000574776 LINC01587Q99440 93 aa10.72□□□□□ -0.69
CTNS-209ENST00000574776 FLVCR2Q9UPI3 526 aa10.72□□□□□ -0.69
CTNS-209ENST00000574776 F5H768 121 aa10.71□□□□□ -0.69
CTNS-209ENST00000574776 SSSCA1O60232 199 aa10.71□□□□□ -0.69
CTNS-209ENST00000574776 METTL15P1P0C7V9 234 aa10.71□□□□□ -0.69
CTNS-209ENST00000574776 HTN1P15515 57 aa10.71□□□□□ -0.69
CTNS-209ENST00000574776 CXCL3P19876 107 aa10.71□□□□□ -0.69
CTNS-209ENST00000574776 PLP1P60201 277 aa10.71□□□□□ -0.69
CTNS-209ENST00000574776 SELENOTP62341 195 aa10.71□□□□□ -0.69
CTNS-209ENST00000574776 HIST1H1AQ02539 215 aaPredicted RBP10.71□□□□□ -0.69
CTNS-209ENST00000574776 PSG3Q16557 428 aa10.71□□□□□ -0.69
CTNS-209ENST00000574776 C15orf53Q8NAA6 179 aa10.71□□□□□ -0.69
CTNS-209ENST00000574776 OR8A1Q8NGG7 326 aa10.71□□□□□ -0.69
CTNS-209ENST00000574776 LRRC20Q8TCA0 184 aa10.71□□□□□ -0.69
CTNS-209ENST00000574776 ATG101Q9BSB4 218 aa10.71□□□□□ -0.69
CTNS-209ENST00000574776 ARL6Q9H0F7 186 aa10.71□□□□□ -0.69
CTNS-209ENST00000574776 NPVFQ9HCQ7 196 aa10.71□□□□□ -0.69
CTNS-209ENST00000574776 PPP1R14DQ9NXH3 145 aa10.71□□□□□ -0.69
CTNS-209ENST00000574776 PLAC8L1A1L4L8 177 aa10.7□□□□□ -0.7
CTNS-209ENST00000574776 BOLA2-SMG1P6H3BVE0 249 aa10.7□□□□□ -0.7
CTNS-209ENST00000574776 NDUFB6O95139 128 aa10.7□□□□□ -0.7
CTNS-209ENST00000574776 ANXA7P20073 488 aaKnown RBP10.7□□□□□ -0.7
CTNS-209ENST00000574776 TSPOP30536 169 aa10.7□□□□□ -0.7
CTNS-209ENST00000574776 INPP1P49441 399 aa10.7□□□□□ -0.7
CTNS-209ENST00000574776 BAK1Q16611 211 aa10.7□□□□□ -0.7
CTNS-209ENST00000574776 PATE2Q6UY27 113 aa10.7□□□□□ -0.7
CTNS-209ENST00000574776 SRRQ9GZT4 340 aa10.7□□□□□ -0.7
CTNS-209ENST00000574776 RYR1P21817 5038 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms