RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 AQP10Q96PS8 301 aa9.5□□□□□ -0.89
TRAPPC1-206ENST00000573989 UHRF2Q96PU4 802 aa9.5□□□□□ -0.89
TRAPPC1-206ENST00000573989 SCRT1Q9BWW7 348 aa9.5□□□□□ -0.89
TRAPPC1-206ENST00000573989 SMIM3Q9BZL3 60 aa9.5□□□□□ -0.89
TRAPPC1-206ENST00000573989 SLC25A32Q9H2D1 315 aa9.5□□□□□ -0.89
TRAPPC1-206ENST00000573989 ZNF688P0C7X2 276 aa9.49□□□□□ -0.89
TRAPPC1-206ENST00000573989 APOC4P55056 127 aa9.49□□□□□ -0.89
TRAPPC1-206ENST00000573989 DEFB131AP59861 70 aa9.49□□□□□ -0.89
TRAPPC1-206ENST00000573989 BPIFA4PQ86YQ2 179 aa9.49□□□□□ -0.89
TRAPPC1-206ENST00000573989 SBSPONQ8IVN8 264 aa9.49□□□□□ -0.89
TRAPPC1-206ENST00000573989 GATAD1Q8WUU5 269 aa9.49□□□□□ -0.89
TRAPPC1-206ENST00000573989 ASCL2Q99929 193 aa9.49□□□□□ -0.89
TRAPPC1-206ENST00000573989 PARD6GQ9BYG4 376 aaPredicted RBP9.49□□□□□ -0.89
TRAPPC1-206ENST00000573989 PSMB3P49720 205 aa9.48□□□□□ -0.89
TRAPPC1-206ENST00000573989 HAGHQ16775 308 aa9.48□□□□□ -0.89
TRAPPC1-206ENST00000573989 PSMG4Q5JS54 123 aa9.48□□□□□ -0.89
TRAPPC1-206ENST00000573989 LEMD1Q68G75 181 aa9.48□□□□□ -0.89
TRAPPC1-206ENST00000573989 PATE2Q6UY27 113 aa9.48□□□□□ -0.89
TRAPPC1-206ENST00000573989 APRG1Q8IVJ8 170 aa9.48□□□□□ -0.89
TRAPPC1-206ENST00000573989 TMEM37Q8WXS4 190 aa9.48□□□□□ -0.89
TRAPPC1-206ENST00000573989 C16orf92Q96LL3 132 aa9.48□□□□□ -0.89
TRAPPC1-206ENST00000573989 RSG1Q9BU20 258 aa9.48□□□□□ -0.89
TRAPPC1-206ENST00000573989 RBMY1BA6NDE4 496 aaKnown RBP9.47□□□□□ -0.89
TRAPPC1-206ENST00000573989 RBMY1EA6NEQ0 496 aaKnown RBP9.47□□□□□ -0.89
TRAPPC1-206ENST00000573989 ISLRO14498 428 aa9.47□□□□□ -0.89
TRAPPC1-206ENST00000573989 RBMY1DP0C7P1 496 aaKnown RBP9.47□□□□□ -0.89
TRAPPC1-206ENST00000573989 Q5BKY6 102 aa9.47□□□□□ -0.89
TRAPPC1-206ENST00000573989 LINC00322Q6ZN03 302 aaPredicted RBP9.47□□□□□ -0.89
TRAPPC1-206ENST00000573989 STHQ8IWL8 128 aa9.47□□□□□ -0.89
TRAPPC1-206ENST00000573989 FAM24BQ8N5W8 94 aa9.47□□□□□ -0.89
TRAPPC1-206ENST00000573989 LRRC20Q8TCA0 184 aa9.47□□□□□ -0.89
TRAPPC1-206ENST00000573989 CITED4Q96RK1 184 aa9.47□□□□□ -0.89
TRAPPC1-206ENST00000573989 SPATA25Q9BR10 227 aa9.47□□□□□ -0.89
TRAPPC1-206ENST00000573989 TNFSF18Q9UNG2 199 aa9.47□□□□□ -0.89
TRAPPC1-206ENST00000573989 TGP01266 2768 aa9.47□□□□□ -0.89
TRAPPC1-206ENST00000573989 KIR2DL5BA0A0G2JN68 375 aa9.46□□□□□ -0.9
TRAPPC1-206ENST00000573989 KIR2DL5BA0A0G2JPC4 375 aa9.46□□□□□ -0.9
TRAPPC1-206ENST00000573989 UBE2CO00762 179 aa9.46□□□□□ -0.9
TRAPPC1-206ENST00000573989 KIR2DL5AQ8N109 375 aa9.46□□□□□ -0.9
TRAPPC1-206ENST00000573989 KIR2DL5BQ8NHK3 375 aa9.46□□□□□ -0.9
TRAPPC1-206ENST00000573989 LINC00052Q96N35 136 aa9.46□□□□□ -0.9
TRAPPC1-206ENST00000573989 TM2D3Q9BRN9 247 aa9.46□□□□□ -0.9
TRAPPC1-206ENST00000573989 A0A087X0K7 114 aa9.45□□□□□ -0.9
TRAPPC1-206ENST00000573989 BORCS7-ASMTA0A0B4J1R7 106 aa9.45□□□□□ -0.9
TRAPPC1-206ENST00000573989 TAAR5O14804 337 aa9.45□□□□□ -0.9
TRAPPC1-206ENST00000573989 ARPC5O15511 151 aa9.45□□□□□ -0.9
TRAPPC1-206ENST00000573989 CXCL2P19875 107 aa9.45□□□□□ -0.9
TRAPPC1-206ENST00000573989 FFAR4Q5NUL3 377 aa9.45□□□□□ -0.9
TRAPPC1-206ENST00000573989 FAM78BQ5VT40 261 aa9.45□□□□□ -0.9
TRAPPC1-206ENST00000573989 LCN15Q6UWW0 184 aa9.45□□□□□ -0.9
TRAPPC1-206ENST00000573989 Q6ZNX1 250 aa9.45□□□□□ -0.9
TRAPPC1-206ENST00000573989 MRPL32Q9BYC8 188 aaKnown RBP9.45□□□□□ -0.9
TRAPPC1-206ENST00000573989 RPRMQ9NS64 109 aa9.45□□□□□ -0.9
TRAPPC1-206ENST00000573989 TIMM9Q9Y5J7 89 aa9.45□□□□□ -0.9
TRAPPC1-206ENST00000573989 U3KQK5 164 aa9.45□□□□□ -0.9
TRAPPC1-206ENST00000573989 SOCS3O14543 225 aa9.44□□□□□ -0.9
TRAPPC1-206ENST00000573989 RPL35AP18077 110 aaKnown RBP9.44□□□□□ -0.9
TRAPPC1-206ENST00000573989 NUTF2P61970 127 aaKnown RBP9.44□□□□□ -0.9
TRAPPC1-206ENST00000573989 ZNF124Q15973 351 aa9.44□□□□□ -0.9
TRAPPC1-206ENST00000573989 ACTL10Q5JWF8 245 aa9.44□□□□□ -0.9
TRAPPC1-206ENST00000573989 SPATA31B1PQ5VZV4 182 aa9.44□□□□□ -0.9
TRAPPC1-206ENST00000573989 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.44□□□□□ -0.9
TRAPPC1-206ENST00000573989 MFFQ9GZY8 342 aa9.44□□□□□ -0.9
TRAPPC1-206ENST00000573989 HRH4Q9H3N8 390 aa9.44□□□□□ -0.9
TRAPPC1-206ENST00000573989 WFDC1Q9HC57 220 aa9.44□□□□□ -0.9
TRAPPC1-206ENST00000573989 AGRNO00468 2067 aa9.44□□□□□ -0.9
TRAPPC1-206ENST00000573989 RNF222A6NCQ9 220 aa9.43□□□□□ -0.9
TRAPPC1-206ENST00000573989 RHOBP62745 196 aa9.43□□□□□ -0.9
TRAPPC1-206ENST00000573989 GUK1Q16774 197 aa9.43□□□□□ -0.9
TRAPPC1-206ENST00000573989 ACOT6Q3I5F7 207 aaPredicted RBP9.43□□□□□ -0.9
TRAPPC1-206ENST00000573989 EBLN2Q6P2I7 272 aa9.43□□□□□ -0.9
TRAPPC1-206ENST00000573989 FOXI2Q6ZQN5 318 aa9.43□□□□□ -0.9
TRAPPC1-206ENST00000573989 HSD17B11Q8NBQ5 300 aa9.43□□□□□ -0.9
TRAPPC1-206ENST00000573989 SLC50A1Q9BRV3 221 aa9.43□□□□□ -0.9
TRAPPC1-206ENST00000573989 CSTL1Q9H114 145 aa9.43□□□□□ -0.9
TRAPPC1-206ENST00000573989 CLEC5AQ9NY25 188 aa9.43□□□□□ -0.9
TRAPPC1-206ENST00000573989 HMSDA8MTL9 139 aa9.42□□□□□ -0.9
TRAPPC1-206ENST00000573989 G3V3Q6 166 aa9.42□□□□□ -0.9
TRAPPC1-206ENST00000573989 SMLR1H3BR10 107 aa9.42□□□□□ -0.9
TRAPPC1-206ENST00000573989 MRPS12O15235 138 aaKnown RBP9.42□□□□□ -0.9
TRAPPC1-206ENST00000573989 JTBO76095 146 aa9.42□□□□□ -0.9
TRAPPC1-206ENST00000573989 MBP02144 154 aa9.42□□□□□ -0.9
TRAPPC1-206ENST00000573989 SPP1P10451 314 aa9.42□□□□□ -0.9
TRAPPC1-206ENST00000573989 TAS2R45P59539 299 aa9.42□□□□□ -0.9
TRAPPC1-206ENST00000573989 SERF2P84101 59 aa9.42□□□□□ -0.9
TRAPPC1-206ENST00000573989 ZNF345Q14585 488 aa9.42□□□□□ -0.9
TRAPPC1-206ENST00000573989 TMEM41BQ5BJD5 291 aa9.42□□□□□ -0.9
TRAPPC1-206ENST00000573989 GCSAMLQ5JQS6 135 aa9.42□□□□□ -0.9
TRAPPC1-206ENST00000573989 MORN3Q6PF18 240 aaPredicted RBP9.42□□□□□ -0.9
TRAPPC1-206ENST00000573989 Q6ZWC4 215 aa9.42□□□□□ -0.9
TRAPPC1-206ENST00000573989 GNPNAT1Q96EK6 184 aaPredicted RBP9.42□□□□□ -0.9
TRAPPC1-206ENST00000573989 RCHY1Q96PM5 261 aa9.42□□□□□ -0.9
TRAPPC1-206ENST00000573989 PSMG3Q9BT73 122 aaPredicted RBP9.42□□□□□ -0.9
TRAPPC1-206ENST00000573989 TMEM14CQ9P0S9 112 aa9.42□□□□□ -0.9
TRAPPC1-206ENST00000573989 FUT9Q9Y231 359 aa9.42□□□□□ -0.9
TRAPPC1-206ENST00000573989 TRAV5A0A0B4J249 113 aa9.41□□□□□ -0.9
TRAPPC1-206ENST00000573989 A0A0D9SG52 128 aa9.41□□□□□ -0.9
TRAPPC1-206ENST00000573989 A0A1W2PPV4 95 aa9.41□□□□□ -0.9
TRAPPC1-206ENST00000573989 KNCNA6PVL3 124 aa9.41□□□□□ -0.9
TRAPPC1-206ENST00000573989 HLA-DRB4P13762 266 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms