RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 SLC35B3Q9H1N7 401 aa12.51□□□□□ -0.41
SMG6-214ENST00000573827 PKHD1P08F94 4074 aa12.51□□□□□ -0.41
SMG6-214ENST00000573827 C11orf94C9JXX5 98 aa12.5□□□□□ -0.41
SMG6-214ENST00000573827 DEDDO75618 318 aa12.5□□□□□ -0.41
SMG6-214ENST00000573827 IGKV3-20P01619 116 aa12.5□□□□□ -0.41
SMG6-214ENST00000573827 GALR1P47211 349 aa12.5□□□□□ -0.41
SMG6-214ENST00000573827 MEOX2P50222 304 aa12.5□□□□□ -0.41
SMG6-214ENST00000573827 SAMD13Q5VXD3 122 aa12.5□□□□□ -0.41
SMG6-214ENST00000573827 SPATA31B1PQ5VZV4 182 aa12.5□□□□□ -0.41
SMG6-214ENST00000573827 PATE2Q6UY27 113 aa12.5□□□□□ -0.41
SMG6-214ENST00000573827 OR1B1Q8NGR6 318 aa12.5□□□□□ -0.41
SMG6-214ENST00000573827 SLC25A22Q9H936 323 aa12.5□□□□□ -0.41
SMG6-214ENST00000573827 CCSO14618 274 aa12.49□□□□□ -0.41
SMG6-214ENST00000573827 MRPS12O15235 138 aaKnown RBP12.49□□□□□ -0.41
SMG6-214ENST00000573827 TCTAP57738 103 aa12.49□□□□□ -0.41
SMG6-214ENST00000573827 FXYD7P58549 80 aa12.49□□□□□ -0.41
SMG6-214ENST00000573827 RRAS2P62070 204 aaPredicted RBP12.49□□□□□ -0.41
SMG6-214ENST00000573827 FAM78BQ5VT40 261 aa12.49□□□□□ -0.41
SMG6-214ENST00000573827 C1orf158Q8N1D5 194 aa12.49□□□□□ -0.41
SMG6-214ENST00000573827 GPR82Q96P67 336 aa12.49□□□□□ -0.41
SMG6-214ENST00000573827 TMEM147Q9BVK8 224 aa12.49□□□□□ -0.41
SMG6-214ENST00000573827 DOK5Q9P104 306 aa12.49□□□□□ -0.41
SMG6-214ENST00000573827 TRAV6A0A075B6T7 132 aa12.48□□□□□ -0.41
SMG6-214ENST00000573827 SMCO3A2RU48 225 aa12.48□□□□□ -0.41
SMG6-214ENST00000573827 SCGB1D2O95969 90 aa12.48□□□□□ -0.41
SMG6-214ENST00000573827 IL5P05113 134 aa12.48□□□□□ -0.41
SMG6-214ENST00000573827 LINC00869P0C866 280 aa12.48□□□□□ -0.41
SMG6-214ENST00000573827 SELENOTP62341 195 aa12.48□□□□□ -0.41
SMG6-214ENST00000573827 IL15RAQ13261 267 aa12.48□□□□□ -0.41
SMG6-214ENST00000573827 LINC00299Q6ZSB3 139 aa12.48□□□□□ -0.41
SMG6-214ENST00000573827 C16orf92Q96LL3 132 aa12.48□□□□□ -0.41
SMG6-214ENST00000573827 SEC22CQ9BRL7 303 aa12.48□□□□□ -0.41
SMG6-214ENST00000573827 CCDC32Q9BV29 185 aa12.48□□□□□ -0.41
SMG6-214ENST00000573827 NUDT15Q9NV35 164 aa12.48□□□□□ -0.41
SMG6-214ENST00000573827 GSKIPQ9P0R6 139 aa12.48□□□□□ -0.41
SMG6-214ENST00000573827 DYNC1H1Q14204 4646 aaKnown RBP12.48□□□□□ -0.41
SMG6-214ENST00000573827 TRAV10A0A0B4J240 114 aa12.47□□□□□ -0.41
SMG6-214ENST00000573827 HYPMO75409 117 aa12.47□□□□□ -0.41
SMG6-214ENST00000573827 PSG9Q00887 426 aa12.47□□□□□ -0.41
SMG6-214ENST00000573827 SLC38A11Q08AI6 406 aa12.47□□□□□ -0.41
SMG6-214ENST00000573827 IGFL4Q6B9Z1 124 aa12.47□□□□□ -0.41
SMG6-214ENST00000573827 ZNF767PQ75MW2 155 aa12.47□□□□□ -0.41
SMG6-214ENST00000573827 OR4B1Q8NGF8 309 aa12.47□□□□□ -0.41
SMG6-214ENST00000573827 ZNF431Q8TF32 576 aaPredicted RBP12.47□□□□□ -0.41
SMG6-214ENST00000573827 UHRF2Q96PU4 802 aa12.47□□□□□ -0.41
SMG6-214ENST00000573827 NPVFQ9HCQ7 196 aa12.47□□□□□ -0.41
SMG6-214ENST00000573827 RPRMQ9NS64 109 aa12.47□□□□□ -0.41
SMG6-214ENST00000573827 HIGD1AQ9Y241 93 aa12.47□□□□□ -0.41
SMG6-214ENST00000573827 DNAH11Q96DT5 4516 aa12.47□□□□□ -0.41
SMG6-214ENST00000573827 A0A087X0K7 114 aa12.46□□□□□ -0.41
SMG6-214ENST00000573827 SMIM9A6NGZ8 99 aa12.46□□□□□ -0.41
SMG6-214ENST00000573827 IGLL5B9A064 214 aa12.46□□□□□ -0.41
SMG6-214ENST00000573827 EBLN2Q6P2I7 272 aa12.46□□□□□ -0.41
SMG6-214ENST00000573827 OR10P1Q8NGE3 313 aa12.46□□□□□ -0.41
SMG6-214ENST00000573827 GGACTQ9BVM4 153 aa12.46□□□□□ -0.41
SMG6-214ENST00000573827 CRXO43186 299 aaPredicted RBP12.45□□□□□ -0.42
SMG6-214ENST00000573827 TEPPQ6URK8 271 aa12.45□□□□□ -0.42
SMG6-214ENST00000573827 RNF182Q8N6D2 247 aa12.45□□□□□ -0.42
SMG6-214ENST00000573827 MGST2Q99735 147 aa12.45□□□□□ -0.42
SMG6-214ENST00000573827 PKD1P98161 4303 aa12.44□□□□□ -0.42
SMG6-214ENST00000573827 KIAA1109Q2LD37 5005 aa12.44□□□□□ -0.42
SMG6-214ENST00000573827 IGHV4-4A0A075B6R2 117 aa12.44□□□□□ -0.42
SMG6-214ENST00000573827 AMBPP02760 352 aa12.44□□□□□ -0.42
SMG6-214ENST00000573827 RPL7P18124 248 aaKnown RBP12.44□□□□□ -0.42
SMG6-214ENST00000573827 CNN1P51911 297 aaKnown RBP12.44□□□□□ -0.42
SMG6-214ENST00000573827 RAP2BP61225 183 aa12.44□□□□□ -0.42
SMG6-214ENST00000573827 RNF126Q9BV68 326 aa12.44□□□□□ -0.42
SMG6-214ENST00000573827 ARL6Q9H0F7 186 aa12.44□□□□□ -0.42
SMG6-214ENST00000573827 MGAT4CQ9UBM8 478 aa12.44□□□□□ -0.42
SMG6-214ENST00000573827 AGPAT2O15120 278 aa12.43□□□□□ -0.42
SMG6-214ENST00000573827 H2AFB2P0C5Z0 115 aa12.43□□□□□ -0.42
SMG6-214ENST00000573827 OR5G3P0C626 314 aa12.43□□□□□ -0.42
SMG6-214ENST00000573827 CXCL3P19876 107 aa12.43□□□□□ -0.42
SMG6-214ENST00000573827 ASAH1Q13510 395 aa12.43□□□□□ -0.42
SMG6-214ENST00000573827 C12orf45Q8N5I9 185 aaPredicted RBP12.43□□□□□ -0.42
SMG6-214ENST00000573827 OR11H7Q8NGC8 314 aa12.43□□□□□ -0.42
SMG6-214ENST00000573827 TMEM37Q8WXS4 190 aa12.43□□□□□ -0.42
SMG6-214ENST00000573827 ARV1Q9H2C2 271 aa12.43□□□□□ -0.42
SMG6-214ENST00000573827 DKK2Q9UBU2 259 aa12.43□□□□□ -0.42
SMG6-214ENST00000573827 RFNGQ9Y644 331 aa12.43□□□□□ -0.42
SMG6-214ENST00000573827 DEFB131BA0A096LNP1 70 aa12.42□□□□□ -0.42
SMG6-214ENST00000573827 S100A7P31151 101 aa12.42□□□□□ -0.42
SMG6-214ENST00000573827 VWC2Q2TAL6 325 aa12.42□□□□□ -0.42
SMG6-214ENST00000573827 PXDC1Q5TGL8 231 aa12.42□□□□□ -0.42
SMG6-214ENST00000573827 MORN5Q5VZ52 161 aa12.42□□□□□ -0.42
SMG6-214ENST00000573827 ZNF546Q86UE3 836 aa12.42□□□□□ -0.42
SMG6-214ENST00000573827 C2orf50Q96LR7 162 aa12.42□□□□□ -0.42
SMG6-214ENST00000573827 IGF2BP2-AS1Q96M15 143 aa12.42□□□□□ -0.42
SMG6-214ENST00000573827 IGHV3OR16-12A0A075B7B8 117 aa12.41□□□□□ -0.42
SMG6-214ENST00000573827 TMEM189A5PLL7 270 aa12.41□□□□□ -0.42
SMG6-214ENST00000573827 FAM24AA6NFZ4 105 aa12.41□□□□□ -0.42
SMG6-214ENST00000573827 A6NHS1 94 aa12.41□□□□□ -0.42
SMG6-214ENST00000573827 IFITM3Q01628 133 aa12.41□□□□□ -0.42
SMG6-214ENST00000573827 LSM5Q9Y4Y9 91 aaKnown RBP12.41□□□□□ -0.42
SMG6-214ENST00000573827 FAM25EA8MYX2 175 aa12.4□□□□□ -0.42
SMG6-214ENST00000573827 M0R2Z0 102 aa12.4□□□□□ -0.42
SMG6-214ENST00000573827 CST7O76096 145 aa12.4□□□□□ -0.42
SMG6-214ENST00000573827 SPART-AS1P0CW21 52 aa12.4□□□□□ -0.42
SMG6-214ENST00000573827 EMP1P54849 157 aa12.4□□□□□ -0.42
SMG6-214ENST00000573827 FGL1Q08830 312 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms