RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 TRAV6A0A075B6T7 132 aa6.94□□□□□ -1.3
NPLOC4-212ENST00000573328 SMIM9A6NGZ8 99 aa6.94□□□□□ -1.3
NPLOC4-212ENST00000573328 ZNF705FA8MVS1 300 aaPredicted RBP6.94□□□□□ -1.3
NPLOC4-212ENST00000573328 FAM25EA8MYX2 175 aa6.94□□□□□ -1.3
NPLOC4-212ENST00000573328 L7N2F9 121 aa6.94□□□□□ -1.3
NPLOC4-212ENST00000573328 CCSO14618 274 aa6.94□□□□□ -1.3
NPLOC4-212ENST00000573328 LYRM1O43325 122 aa6.94□□□□□ -1.3
NPLOC4-212ENST00000573328 HYPMO75409 117 aa6.94□□□□□ -1.3
NPLOC4-212ENST00000573328 HBE1P02100 147 aa6.94□□□□□ -1.3
NPLOC4-212ENST00000573328 ZNF705DP0CH99 300 aaPredicted RBP6.94□□□□□ -1.3
NPLOC4-212ENST00000573328 ZNF705BP0CI00 300 aaPredicted RBP6.94□□□□□ -1.3
NPLOC4-212ENST00000573328 SPART-AS1P0CW21 52 aa6.94□□□□□ -1.3
NPLOC4-212ENST00000573328 RPL7P18124 248 aaKnown RBP6.94□□□□□ -1.3
NPLOC4-212ENST00000573328 PAX9P55771 341 aa6.94□□□□□ -1.3
NPLOC4-212ENST00000573328 SELENOTP62341 195 aa6.94□□□□□ -1.3
NPLOC4-212ENST00000573328 VAMP2P63027 116 aa6.94□□□□□ -1.3
NPLOC4-212ENST00000573328 DLK1P80370 383 aa6.94□□□□□ -1.3
NPLOC4-212ENST00000573328 C12orf74Q32Q52 190 aa6.94□□□□□ -1.3
NPLOC4-212ENST00000573328 CNPY1Q3B7I2 92 aa6.94□□□□□ -1.3
NPLOC4-212ENST00000573328 ZNF705AQ6ZN79 300 aaPredicted RBP6.94□□□□□ -1.3
NPLOC4-212ENST00000573328 ZNF709Q8N972 641 aa6.94□□□□□ -1.3
NPLOC4-212ENST00000573328 ZNF738Q8NE65 137 aa6.94□□□□□ -1.3
NPLOC4-212ENST00000573328 LRRC20Q8TCA0 184 aa6.94□□□□□ -1.3
NPLOC4-212ENST00000573328 C20orf173Q96LM9 149 aa6.94□□□□□ -1.3
NPLOC4-212ENST00000573328 UHRF2Q96PU4 802 aa6.94□□□□□ -1.3
NPLOC4-212ENST00000573328 NEU1Q99519 415 aa6.94□□□□□ -1.3
NPLOC4-212ENST00000573328 RNF126Q9BV68 326 aa6.94□□□□□ -1.3
NPLOC4-212ENST00000573328 KRTAP17-1Q9BYP8 105 aa6.94□□□□□ -1.3
NPLOC4-212ENST00000573328 ARL6Q9H0F7 186 aa6.94□□□□□ -1.3
NPLOC4-212ENST00000573328 NPVFQ9HCQ7 196 aa6.94□□□□□ -1.3
NPLOC4-212ENST00000573328 RCL1Q9Y2P8 373 aaKnown RBP6.94□□□□□ -1.3
NPLOC4-212ENST00000573328 TEX48A0A1B0GUV7 120 aa6.93□□□□□ -1.3
NPLOC4-212ENST00000573328 GOSR2O14653 212 aa6.93□□□□□ -1.3
NPLOC4-212ENST00000573328 TSC22D2O75157 780 aa6.93□□□□□ -1.3
NPLOC4-212ENST00000573328 DUSP14O95147 198 aaKnown RBP6.93□□□□□ -1.3
NPLOC4-212ENST00000573328 AMBPP02760 352 aa6.93□□□□□ -1.3
NPLOC4-212ENST00000573328 HTN3P15516 51 aa6.93□□□□□ -1.3
NPLOC4-212ENST00000573328 BCAP31P51572 246 aa6.93□□□□□ -1.3
NPLOC4-212ENST00000573328 PRR20EP86478 221 aa6.93□□□□□ -1.3
NPLOC4-212ENST00000573328 PRR20CP86479 221 aa6.93□□□□□ -1.3
NPLOC4-212ENST00000573328 PRR20DP86480 221 aa6.93□□□□□ -1.3
NPLOC4-212ENST00000573328 PRR20BP86481 221 aa6.93□□□□□ -1.3
NPLOC4-212ENST00000573328 PRR20AP86496 221 aa6.93□□□□□ -1.3
NPLOC4-212ENST00000573328 SLC38A11Q08AI6 406 aa6.93□□□□□ -1.3
NPLOC4-212ENST00000573328 RRN3P1Q2M238 152 aa6.93□□□□□ -1.3
NPLOC4-212ENST00000573328 IGFL4Q6B9Z1 124 aa6.93□□□□□ -1.3
NPLOC4-212ENST00000573328 TEPPQ6URK8 271 aa6.93□□□□□ -1.3
NPLOC4-212ENST00000573328 TMEM14EPQ6UXP3 125 aa6.93□□□□□ -1.3
NPLOC4-212ENST00000573328 RNF182Q8N6D2 247 aa6.93□□□□□ -1.3
NPLOC4-212ENST00000573328 MITD1Q8WV92 249 aa6.93□□□□□ -1.3
NPLOC4-212ENST00000573328 CLUHP3Q96NS8 147 aa6.93□□□□□ -1.3
NPLOC4-212ENST00000573328 SHANK2-AS3Q9BTD1 123 aa6.93□□□□□ -1.3
NPLOC4-212ENST00000573328 NDUFAF3Q9BU61 184 aa6.93□□□□□ -1.3
NPLOC4-212ENST00000573328 PPP1R14DQ9NXH3 145 aa6.93□□□□□ -1.3
NPLOC4-212ENST00000573328 NDUFA13Q9P0J0 144 aa6.93□□□□□ -1.3
NPLOC4-212ENST00000573328 LSM5Q9Y4Y9 91 aaKnown RBP6.93□□□□□ -1.3
NPLOC4-212ENST00000573328 LOC102723971A0A1B0GUV8 181 aa6.92□□□□□ -1.3
NPLOC4-212ENST00000573328 C5orf51A6NDU8 294 aa6.92□□□□□ -1.3
NPLOC4-212ENST00000573328 PMS2P5A8MQ11 134 aa6.92□□□□□ -1.3
NPLOC4-212ENST00000573328 M0R2Z0 102 aa6.92□□□□□ -1.3
NPLOC4-212ENST00000573328 INSP01308 110 aa6.92□□□□□ -1.3
NPLOC4-212ENST00000573328 MBPP02686 304 aaPredicted RBP6.92□□□□□ -1.3
NPLOC4-212ENST00000573328 CNN1P51911 297 aaKnown RBP6.92□□□□□ -1.3
NPLOC4-212ENST00000573328 TAS2R30P59541 319 aa6.92□□□□□ -1.3
NPLOC4-212ENST00000573328 RHOBP62745 196 aa6.92□□□□□ -1.3
NPLOC4-212ENST00000573328 SPINK13Q1W4C9 94 aa6.92□□□□□ -1.3
NPLOC4-212ENST00000573328 FAM222AQ5U5X8 452 aa6.92□□□□□ -1.3
NPLOC4-212ENST00000573328 ZNF546Q86UE3 836 aa6.92□□□□□ -1.3
NPLOC4-212ENST00000573328 NIPSNAP3BQ9BS92 247 aa6.92□□□□□ -1.3
NPLOC4-212ENST00000573328 ARV1Q9H2C2 271 aa6.92□□□□□ -1.3
NPLOC4-212ENST00000573328 NUDT15Q9NV35 164 aa6.92□□□□□ -1.3
NPLOC4-212ENST00000573328 RNF24Q9Y225 148 aa6.92□□□□□ -1.3
NPLOC4-212ENST00000573328 C7orf66A4D0T2 115 aa6.91□□□□□ -1.3
NPLOC4-212ENST00000573328 FNDC10F2Z333 226 aa6.91□□□□□ -1.3
NPLOC4-212ENST00000573328 AGPAT2O15120 278 aa6.91□□□□□ -1.3
NPLOC4-212ENST00000573328 PLA2G10O15496 165 aa6.91□□□□□ -1.3
NPLOC4-212ENST00000573328 COX7A2P2O60397 106 aa6.91□□□□□ -1.3
NPLOC4-212ENST00000573328 TCRBP04435 133 aa6.91□□□□□ -1.3
NPLOC4-212ENST00000573328 P0DMU3 169 aa6.91□□□□□ -1.3
NPLOC4-212ENST00000573328 FAM231AP0DMU4 169 aa6.91□□□□□ -1.3
NPLOC4-212ENST00000573328 FAM231CP0DMU5 169 aa6.91□□□□□ -1.3
NPLOC4-212ENST00000573328 CAV2P51636 162 aa6.91□□□□□ -1.3
NPLOC4-212ENST00000573328 PLP1P60201 277 aa6.91□□□□□ -1.3
NPLOC4-212ENST00000573328 S100A10P60903 97 aa6.91□□□□□ -1.3
NPLOC4-212ENST00000573328 HIST1H1AQ02539 215 aaPredicted RBP6.91□□□□□ -1.3
NPLOC4-212ENST00000573328 UBE2DNLQ8IWF7 75 aa6.91□□□□□ -1.3
NPLOC4-212ENST00000573328 C1orf158Q8N1D5 194 aa6.91□□□□□ -1.3
NPLOC4-212ENST00000573328 OR11H7Q8NGC8 314 aa6.91□□□□□ -1.3
NPLOC4-212ENST00000573328 IGF2BP2-AS1Q96M15 143 aa6.91□□□□□ -1.3
NPLOC4-212ENST00000573328 SEC22CQ9BRL7 303 aa6.91□□□□□ -1.3
NPLOC4-212ENST00000573328 DKK2Q9UBU2 259 aa6.91□□□□□ -1.3
NPLOC4-212ENST00000573328 BOLA1Q9Y3E2 137 aa6.91□□□□□ -1.3
NPLOC4-212ENST00000573328 YTHDF2Q9Y5A9 579 aaKnown RBP6.91□□□□□ -1.3
NPLOC4-212ENST00000573328 A0A087X0K7 114 aa6.9□□□□□ -1.3
NPLOC4-212ENST00000573328 TRAV8-2A0A0B4J237 113 aa6.9□□□□□ -1.3
NPLOC4-212ENST00000573328 FAM240BA0A1B0GVZ2 78 aa6.9□□□□□ -1.3
NPLOC4-212ENST00000573328 BOLA2-SMG1P6H3BVE0 249 aa6.9□□□□□ -1.3
NPLOC4-212ENST00000573328 K7EPK0 472 aa6.9□□□□□ -1.3
NPLOC4-212ENST00000573328 PVALBP20472 110 aaPredicted RBP6.9□□□□□ -1.3
NPLOC4-212ENST00000573328 DAD1P61803 113 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms