RNA–Protein interactions for RNA: ENST00000572756.5

NDE1-205, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 5

Gene NDE1, Length 915 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-205ENST00000572756 PMS2P11Q13670 270 aa11.72□□□□□ -0.53
NDE1-205ENST00000572756 FOXI2Q6ZQN5 318 aa11.72□□□□□ -0.53
NDE1-205ENST00000572756 ZNF546Q86UE3 836 aa11.72□□□□□ -0.53
NDE1-205ENST00000572756 C20orf173Q96LM9 149 aa11.72□□□□□ -0.53
NDE1-205ENST00000572756 LINC00052Q96N35 136 aa11.72□□□□□ -0.53
NDE1-205ENST00000572756 CLUHP3Q96NS8 147 aa11.72□□□□□ -0.53
NDE1-205ENST00000572756 UHRF2Q96PU4 802 aa11.72□□□□□ -0.53
NDE1-205ENST00000572756 MGST2Q99735 147 aa11.72□□□□□ -0.53
NDE1-205ENST00000572756 LYRM2Q9NU23 88 aaPredicted RBP11.72□□□□□ -0.53
NDE1-205ENST00000572756 X6R8D5 127 aa11.72□□□□□ -0.53
NDE1-205ENST00000572756 ALMS1Q8TCU4 4167 aa11.72□□□□□ -0.53
NDE1-205ENST00000572756 IGSF23A1L1A6 192 aa11.71□□□□□ -0.53
NDE1-205ENST00000572756 CXorf65A6NEN9 183 aa11.71□□□□□ -0.53
NDE1-205ENST00000572756 OR5G3P0C626 314 aa11.71□□□□□ -0.53
NDE1-205ENST00000572756 VWC2Q2TAL6 325 aa11.71□□□□□ -0.53
NDE1-205ENST00000572756 PXDC1Q5TGL8 231 aa11.71□□□□□ -0.53
NDE1-205ENST00000572756 TMEM252Q8N6L7 170 aa11.71□□□□□ -0.53
NDE1-205ENST00000572756 ARL6Q9H0F7 186 aa11.71□□□□□ -0.53
NDE1-205ENST00000572756 CLEC5AQ9NY25 188 aa11.71□□□□□ -0.53
NDE1-205ENST00000572756 GOSR2O14653 212 aa11.7□□□□□ -0.54
NDE1-205ENST00000572756 SIX6O95475 246 aa11.7□□□□□ -0.54
NDE1-205ENST00000572756 SULT1A1P50225 295 aa11.7□□□□□ -0.54
NDE1-205ENST00000572756 NUTF2P61970 127 aaKnown RBP11.7□□□□□ -0.54
NDE1-205ENST00000572756 SPATA31B1PQ5VZV4 182 aa11.7□□□□□ -0.54
NDE1-205ENST00000572756 C16orf92Q96LL3 132 aa11.7□□□□□ -0.54
NDE1-205ENST00000572756 ARV1Q9H2C2 271 aa11.7□□□□□ -0.54
NDE1-205ENST00000572756 WDR83OSQ9Y284 106 aa11.7□□□□□ -0.54
NDE1-205ENST00000572756 A0A087X0K7 114 aa11.69□□□□□ -0.54
NDE1-205ENST00000572756 TRAV8-2A0A0B4J237 113 aa11.69□□□□□ -0.54
NDE1-205ENST00000572756 IGHV4-28A0A0C4DH34 117 aa11.69□□□□□ -0.54
NDE1-205ENST00000572756 A0A0J9YX75 114 aa11.69□□□□□ -0.54
NDE1-205ENST00000572756 NUPR2A6NF83 97 aa11.69□□□□□ -0.54
NDE1-205ENST00000572756 A8MTW9 85 aa11.69□□□□□ -0.54
NDE1-205ENST00000572756 F6UB75 175 aa11.69□□□□□ -0.54
NDE1-205ENST00000572756 MRPS12O15235 138 aaKnown RBP11.69□□□□□ -0.54
NDE1-205ENST00000572756 DEFB4AO15263 64 aa11.69□□□□□ -0.54
NDE1-205ENST00000572756 RBMY1A1P0DJD3 496 aaKnown RBP11.69□□□□□ -0.54
NDE1-205ENST00000572756 RBMY1CP0DJD4 496 aa11.69□□□□□ -0.54
NDE1-205ENST00000572756 MIFP14174 115 aa11.69□□□□□ -0.54
NDE1-205ENST00000572756 RPL7P18124 248 aaKnown RBP11.69□□□□□ -0.54
NDE1-205ENST00000572756 DEFA1P59665 94 aa11.69□□□□□ -0.54
NDE1-205ENST00000572756 DEFA3P59666 94 aa11.69□□□□□ -0.54
NDE1-205ENST00000572756 RBMY1FQ15415 496 aaKnown RBP11.69□□□□□ -0.54
NDE1-205ENST00000572756 CEMP1Q6PRD7 247 aaPredicted RBP11.69□□□□□ -0.54
NDE1-205ENST00000572756 ZNF709Q8N972 641 aa11.69□□□□□ -0.54
NDE1-205ENST00000572756 C1QTNF4Q9BXJ3 329 aa11.69□□□□□ -0.54
NDE1-205ENST00000572756 NMES1Q9C002 83 aa11.69□□□□□ -0.54
NDE1-205ENST00000572756 UQCC1Q9NVA1 299 aa11.69□□□□□ -0.54
NDE1-205ENST00000572756 XCL2Q9UBD3 114 aa11.69□□□□□ -0.54
NDE1-205ENST00000572756 S100A11P31949 105 aa11.68□□□□□ -0.54
NDE1-205ENST00000572756 PRR20EP86478 221 aa11.68□□□□□ -0.54
NDE1-205ENST00000572756 PRR20CP86479 221 aa11.68□□□□□ -0.54
NDE1-205ENST00000572756 PRR20DP86480 221 aa11.68□□□□□ -0.54
NDE1-205ENST00000572756 PRR20BP86481 221 aa11.68□□□□□ -0.54
NDE1-205ENST00000572756 PRR20AP86496 221 aa11.68□□□□□ -0.54
NDE1-205ENST00000572756 S100A7AQ86SG5 101 aa11.68□□□□□ -0.54
NDE1-205ENST00000572756 TMEM37Q8WXS4 190 aa11.68□□□□□ -0.54
NDE1-205ENST00000572756 RPRMQ9NS64 109 aa11.68□□□□□ -0.54
NDE1-205ENST00000572756 JTBO76095 146 aa11.67□□□□□ -0.54
NDE1-205ENST00000572756 IGKV3-20P01619 116 aa11.67□□□□□ -0.54
NDE1-205ENST00000572756 CAMLGP49069 296 aa11.67□□□□□ -0.54
NDE1-205ENST00000572756 NANOS2P60321 138 aaKnown RBP11.67□□□□□ -0.54
NDE1-205ENST00000572756 EBLN2Q6P2I7 272 aa11.67□□□□□ -0.54
NDE1-205ENST00000572756 LINC00305Q7Z4B0 112 aa11.67□□□□□ -0.54
NDE1-205ENST00000572756 STX12Q86Y82 276 aa11.67□□□□□ -0.54
NDE1-205ENST00000572756 C11orf45Q8TAV5 145 aa11.67□□□□□ -0.54
NDE1-205ENST00000572756 CHAC2Q8WUX2 184 aa11.67□□□□□ -0.54
NDE1-205ENST00000572756 PHLDA1Q8WV24 401 aaPredicted RBP11.67□□□□□ -0.54
NDE1-205ENST00000572756 ELOA3CA0A087WX78 387 aaPredicted RBP11.66□□□□□ -0.54
NDE1-205ENST00000572756 H0YIZ8 118 aa11.66□□□□□ -0.54
NDE1-205ENST00000572756 H2BFSP57053 126 aa11.66□□□□□ -0.54
NDE1-205ENST00000572756 HBG1P69891 147 aa11.66□□□□□ -0.54
NDE1-205ENST00000572756 HBG2P69892 147 aa11.66□□□□□ -0.54
NDE1-205ENST00000572756 RAB31Q13636 194 aa11.66□□□□□ -0.54
NDE1-205ENST00000572756 FAM78BQ5VT40 261 aa11.66□□□□□ -0.54
NDE1-205ENST00000572756 MORN5Q5VZ52 161 aa11.66□□□□□ -0.54
NDE1-205ENST00000572756 MIC13Q5XKP0 118 aa11.66□□□□□ -0.54
NDE1-205ENST00000572756 IGFL4Q6B9Z1 124 aa11.66□□□□□ -0.54
NDE1-205ENST00000572756 ZNF705AQ6ZN79 300 aaPredicted RBP11.66□□□□□ -0.54
NDE1-205ENST00000572756 OR4B1Q8NGF8 309 aa11.66□□□□□ -0.54
NDE1-205ENST00000572756 MFFQ9GZY8 342 aa11.66□□□□□ -0.54
NDE1-205ENST00000572756 SLC35B3Q9H1N7 401 aa11.66□□□□□ -0.54
NDE1-205ENST00000572756 HRH4Q9H3N8 390 aa11.66□□□□□ -0.54
NDE1-205ENST00000572756 OR5AC2Q9NZP5 309 aa11.66□□□□□ -0.54
NDE1-205ENST00000572756 RNF24Q9Y225 148 aa11.66□□□□□ -0.54
NDE1-205ENST00000572756 HYDINQ4G0P3 5121 aa11.65□□□□□ -0.54
NDE1-205ENST00000572756 UBE2L5PA0A1B0GUS4 154 aa11.65□□□□□ -0.54
NDE1-205ENST00000572756 ZNF705FA8MVS1 300 aaPredicted RBP11.65□□□□□ -0.54
NDE1-205ENST00000572756 COX7A2P2O60397 106 aa11.65□□□□□ -0.54
NDE1-205ENST00000572756 ZNF705DP0CH99 300 aaPredicted RBP11.65□□□□□ -0.54
NDE1-205ENST00000572756 ZNF705BP0CI00 300 aaPredicted RBP11.65□□□□□ -0.54
NDE1-205ENST00000572756 RPL29P47914 159 aaKnown RBP11.65□□□□□ -0.54
NDE1-205ENST00000572756 FXYD7P58549 80 aa11.65□□□□□ -0.54
NDE1-205ENST00000572756 CYCSP99999 105 aaKnown RBP11.65□□□□□ -0.54
NDE1-205ENST00000572756 PSG9Q00887 426 aa11.65□□□□□ -0.54
NDE1-205ENST00000572756 FGL1Q08830 312 aa11.65□□□□□ -0.54
NDE1-205ENST00000572756 OPCMLQ14982 345 aa11.65□□□□□ -0.54
NDE1-205ENST00000572756 ATP6V1FQ16864 119 aa11.65□□□□□ -0.54
NDE1-205ENST00000572756 AMTNQ6UX39 209 aa11.65□□□□□ -0.54
NDE1-205ENST00000572756 RNF182Q8N6D2 247 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms