RNA–Protein interactions for RNA: ENST00000572656.2

TRAPPC1-205, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-205ENST00000572656 RABL2BQ9UNT1 228 aa6.91□□□□□ -1.3
TRAPPC1-205ENST00000572656 LINC00588Q9Y4M8 146 aa6.91□□□□□ -1.3
TRAPPC1-205ENST00000572656 MUC4Q99102 2169 aa6.91□□□□□ -1.3
TRAPPC1-205ENST00000572656 TRAV8-2A0A0B4J237 113 aa6.9□□□□□ -1.3
TRAPPC1-205ENST00000572656 IAPPP10997 89 aa6.9□□□□□ -1.3
TRAPPC1-205ENST00000572656 ORM2P19652 201 aa6.9□□□□□ -1.3
TRAPPC1-205ENST00000572656 AZU1P20160 251 aa6.9□□□□□ -1.3
TRAPPC1-205ENST00000572656 S100A7P31151 101 aa6.9□□□□□ -1.3
TRAPPC1-205ENST00000572656 IL18Q14116 193 aa6.9□□□□□ -1.3
TRAPPC1-205ENST00000572656 FCN2Q15485 313 aa6.9□□□□□ -1.3
TRAPPC1-205ENST00000572656 IGFL4Q6B9Z1 124 aa6.9□□□□□ -1.3
TRAPPC1-205ENST00000572656 BAP18Q8IXM2 172 aa6.9□□□□□ -1.3
TRAPPC1-205ENST00000572656 BPIFCQ8NFQ6 507 aa6.9□□□□□ -1.3
TRAPPC1-205ENST00000572656 PAIP2BQ9ULR5 123 aaKnown RBP6.9□□□□□ -1.3
TRAPPC1-205ENST00000572656 DUXBA0A1W2PPF3 345 aa6.89□□□□□ -1.31
TRAPPC1-205ENST00000572656 PRSS46E5RG02 174 aa6.89□□□□□ -1.31
TRAPPC1-205ENST00000572656 BOLA2-SMG1P6H3BVE0 249 aa6.89□□□□□ -1.31
TRAPPC1-205ENST00000572656 MED6O75586 246 aa6.89□□□□□ -1.31
TRAPPC1-205ENST00000572656 SLC25A6P12236 298 aa6.89□□□□□ -1.31
TRAPPC1-205ENST00000572656 RPP30P78346 268 aaKnown RBP6.89□□□□□ -1.31
TRAPPC1-205ENST00000572656 TMEM182Q6ZP80 229 aaPredicted RBP6.89□□□□□ -1.31
TRAPPC1-205ENST00000572656 SSX7Q7RTT5 188 aa6.89□□□□□ -1.31
TRAPPC1-205ENST00000572656 TMEM256Q8N2U0 113 aa6.89□□□□□ -1.31
TRAPPC1-205ENST00000572656 RNF182Q8N6D2 247 aa6.89□□□□□ -1.31
TRAPPC1-205ENST00000572656 RNF141Q8WVD5 230 aa6.89□□□□□ -1.31
TRAPPC1-205ENST00000572656 DIRAS2Q96HU8 199 aa6.89□□□□□ -1.31
TRAPPC1-205ENST00000572656 LINC01587Q99440 93 aa6.89□□□□□ -1.31
TRAPPC1-205ENST00000572656 TMEM147Q9BVK8 224 aa6.89□□□□□ -1.31
TRAPPC1-205ENST00000572656 MCUBQ9NWR8 336 aa6.89□□□□□ -1.31
TRAPPC1-205ENST00000572656 TRAV12-2A0A075B6T6 113 aa6.88□□□□□ -1.31
TRAPPC1-205ENST00000572656 GATA2P23769 480 aaPredicted RBP6.88□□□□□ -1.31
TRAPPC1-205ENST00000572656 TAS2R60P59551 318 aa6.88□□□□□ -1.31
TRAPPC1-205ENST00000572656 FGL1Q08830 312 aa6.88□□□□□ -1.31
TRAPPC1-205ENST00000572656 CLINT1Q14677 625 aa6.88□□□□□ -1.31
TRAPPC1-205ENST00000572656 SPATA12Q7Z6I5 190 aa6.88□□□□□ -1.31
TRAPPC1-205ENST00000572656 ZNF738Q8NE65 137 aa6.88□□□□□ -1.31
TRAPPC1-205ENST00000572656 CIB3Q96Q77 187 aaPredicted RBP6.88□□□□□ -1.31
TRAPPC1-205ENST00000572656 SLC25A39Q9BZJ4 359 aaPredicted RBP6.88□□□□□ -1.31
TRAPPC1-205ENST00000572656 Q9H8V8 135 aa6.88□□□□□ -1.31
TRAPPC1-205ENST00000572656 SCRT2Q9NQ03 307 aa6.88□□□□□ -1.31
TRAPPC1-205ENST00000572656 TIMM8BQ9Y5J9 83 aaPredicted RBP6.88□□□□□ -1.31
TRAPPC1-205ENST00000572656 LRP1BQ9NZR2 4599 aa6.88□□□□□ -1.31
TRAPPC1-205ENST00000572656 SYNGR2O43760 224 aa6.87□□□□□ -1.31
TRAPPC1-205ENST00000572656 SMIM18P0DKX4 95 aa6.87□□□□□ -1.31
TRAPPC1-205ENST00000572656 HTN1P15515 57 aa6.87□□□□□ -1.31
TRAPPC1-205ENST00000572656 RPL7P18124 248 aaKnown RBP6.87□□□□□ -1.31
TRAPPC1-205ENST00000572656 RHOBP62745 196 aa6.87□□□□□ -1.31
TRAPPC1-205ENST00000572656 HIST1H1AQ02539 215 aaPredicted RBP6.87□□□□□ -1.31
TRAPPC1-205ENST00000572656 AKR1C1Q04828 323 aa6.87□□□□□ -1.31
TRAPPC1-205ENST00000572656 SPCS2Q15005 226 aa6.87□□□□□ -1.31
TRAPPC1-205ENST00000572656 TMEM128Q5BJH2 165 aa6.87□□□□□ -1.31
TRAPPC1-205ENST00000572656 ZNF493Q6ZR52 646 aa6.87□□□□□ -1.31
TRAPPC1-205ENST00000572656 TMEM144Q7Z5S9 345 aa6.87□□□□□ -1.31
TRAPPC1-205ENST00000572656 LRTM2Q8N967 370 aa6.87□□□□□ -1.31
TRAPPC1-205ENST00000572656 OR8A1Q8NGG7 326 aa6.87□□□□□ -1.31
TRAPPC1-205ENST00000572656 C16orf74Q96GX8 76 aa6.87□□□□□ -1.31
TRAPPC1-205ENST00000572656 SHANK2-AS3Q9BTD1 123 aa6.87□□□□□ -1.31
TRAPPC1-205ENST00000572656 PPP1R14DQ9NXH3 145 aa6.87□□□□□ -1.31
TRAPPC1-205ENST00000572656 RSL24D1Q9UHA3 163 aaKnown RBP6.87□□□□□ -1.31
TRAPPC1-205ENST00000572656 H3BRN7 92 aa6.86□□□□□ -1.31
TRAPPC1-205ENST00000572656 WRBO00258 174 aa6.86□□□□□ -1.31
TRAPPC1-205ENST00000572656 CXCL3P19876 107 aa6.86□□□□□ -1.31
TRAPPC1-205ENST00000572656 RAP2BP61225 183 aa6.86□□□□□ -1.31
TRAPPC1-205ENST00000572656 PSG3Q16557 428 aa6.86□□□□□ -1.31
TRAPPC1-205ENST00000572656 TTC32Q5I0X7 151 aa6.86□□□□□ -1.31
TRAPPC1-205ENST00000572656 SPANXN5Q5MJ07 72 aa6.86□□□□□ -1.31
TRAPPC1-205ENST00000572656 TMED4Q7Z7H5 227 aa6.86□□□□□ -1.31
TRAPPC1-205ENST00000572656 OR10J6PQ8NGY7 276 aa6.86□□□□□ -1.31
TRAPPC1-205ENST00000572656 ZNF503Q96F45 646 aa6.86□□□□□ -1.31
TRAPPC1-205ENST00000572656 NOP10Q9NPE3 64 aaKnown RBP6.86□□□□□ -1.31
TRAPPC1-205ENST00000572656 HIGD1AQ9Y241 93 aa6.86□□□□□ -1.31
TRAPPC1-205ENST00000572656 STRAPQ9Y3F4 350 aaKnown RBP6.86□□□□□ -1.31
TRAPPC1-205ENST00000572656 NACAE9PAV3 2078 aa6.86□□□□□ -1.31
TRAPPC1-205ENST00000572656 A0A087X0K7 114 aa6.85□□□□□ -1.31
TRAPPC1-205ENST00000572656 A0A1W2PPQ1 181 aa6.85□□□□□ -1.31
TRAPPC1-205ENST00000572656 H7BYZ3 331 aa6.85□□□□□ -1.31
TRAPPC1-205ENST00000572656 HYPMO75409 117 aa6.85□□□□□ -1.31
TRAPPC1-205ENST00000572656 IL5P05113 134 aa6.85□□□□□ -1.31
TRAPPC1-205ENST00000572656 BTF3P20290 206 aaKnown RBP6.85□□□□□ -1.31
TRAPPC1-205ENST00000572656 VAMP1P23763 118 aa6.85□□□□□ -1.31
TRAPPC1-205ENST00000572656 CDKN1BP46527 198 aa6.85□□□□□ -1.31
TRAPPC1-205ENST00000572656 PLP1P60201 277 aa6.85□□□□□ -1.31
TRAPPC1-205ENST00000572656 KRTAP10-2P60368 255 aa6.85□□□□□ -1.31
TRAPPC1-205ENST00000572656 OR5I1Q13606 314 aa6.85□□□□□ -1.31
TRAPPC1-205ENST00000572656 CYP2G1PQ6ZSU1 146 aa6.85□□□□□ -1.31
TRAPPC1-205ENST00000572656 ACOT7LQ6ZUV0 252 aa6.85□□□□□ -1.31
TRAPPC1-205ENST00000572656 LRRC20Q8TCA0 184 aa6.85□□□□□ -1.31
TRAPPC1-205ENST00000572656 RNASE8Q8TDE3 154 aaKnown RBP6.85□□□□□ -1.31
TRAPPC1-205ENST00000572656 RXFP4Q8TDU9 374 aa6.85□□□□□ -1.31
TRAPPC1-205ENST00000572656 TMEM263Q8WUH6 116 aaKnown RBP6.85□□□□□ -1.31
TRAPPC1-205ENST00000572656 GNPNAT1Q96EK6 184 aaPredicted RBP6.85□□□□□ -1.31
TRAPPC1-205ENST00000572656 SOSTQ9BQB4 213 aa6.85□□□□□ -1.31
TRAPPC1-205ENST00000572656 UPK3BQ9BT76 320 aa6.85□□□□□ -1.31
TRAPPC1-205ENST00000572656 KRTAP1-5Q9BYS1 174 aa6.85□□□□□ -1.31
TRAPPC1-205ENST00000572656 Q9H3A6 140 aa6.85□□□□□ -1.31
TRAPPC1-205ENST00000572656 CCDC59Q9P031 241 aaKnown RBP6.85□□□□□ -1.31
TRAPPC1-205ENST00000572656 TRAV26-1A0A087WT03 109 aa6.84□□□□□ -1.31
TRAPPC1-205ENST00000572656 H3BP45 60 aa6.84□□□□□ -1.31
TRAPPC1-205ENST00000572656 ADAP1O75689 374 aa6.84□□□□□ -1.31
TRAPPC1-205ENST00000572656 OR5G3P0C626 314 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms