RNA–Protein interactions for RNA: ENST00000571627.5

LITAF-208, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-208ENST00000571627 ID1P41134 155 aa10.65□□□□□ -0.7
LITAF-208ENST00000571627 CAMLGP49069 296 aa10.65□□□□□ -0.7
LITAF-208ENST00000571627 MEOX2P50222 304 aa10.65□□□□□ -0.7
LITAF-208ENST00000571627 ACTL10Q5JWF8 245 aa10.65□□□□□ -0.7
LITAF-208ENST00000571627 IL17DQ8TAD2 202 aa10.65□□□□□ -0.7
LITAF-208ENST00000571627 MGST2Q99735 147 aa10.65□□□□□ -0.7
LITAF-208ENST00000571627 SHANK2-AS3Q9BTD1 123 aa10.65□□□□□ -0.7
LITAF-208ENST00000571627 SLC25A39Q9BZJ4 359 aaPredicted RBP10.65□□□□□ -0.7
LITAF-208ENST00000571627 ARL6Q9H0F7 186 aa10.65□□□□□ -0.7
LITAF-208ENST00000571627 SLC25A22Q9H936 323 aa10.65□□□□□ -0.7
LITAF-208ENST00000571627 DOK5Q9P104 306 aa10.65□□□□□ -0.7
LITAF-208ENST00000571627 H3BRN7 92 aa10.64□□□□□ -0.71
LITAF-208ENST00000571627 MPDU1O75352 247 aa10.64□□□□□ -0.71
LITAF-208ENST00000571627 C4BPBP20851 252 aa10.64□□□□□ -0.71
LITAF-208ENST00000571627 NHLH2Q02577 135 aa10.64□□□□□ -0.71
LITAF-208ENST00000571627 PMS2P11Q13670 270 aa10.64□□□□□ -0.71
LITAF-208ENST00000571627 Q6ZRG5 221 aa10.64□□□□□ -0.71
LITAF-208ENST00000571627 CHAC2Q8WUX2 184 aa10.64□□□□□ -0.71
LITAF-208ENST00000571627 RNF126Q9BV68 326 aa10.64□□□□□ -0.71
LITAF-208ENST00000571627 SLC25A32Q9H2D1 315 aa10.64□□□□□ -0.71
LITAF-208ENST00000571627 ELOA3CA0A087WX78 387 aaPredicted RBP10.63□□□□□ -0.71
LITAF-208ENST00000571627 UBE2L5PA0A1B0GUS4 154 aa10.63□□□□□ -0.71
LITAF-208ENST00000571627 GIG44P09565 113 aaPredicted RBP10.63□□□□□ -0.71
LITAF-208ENST00000571627 RPL7P18124 248 aaKnown RBP10.63□□□□□ -0.71
LITAF-208ENST00000571627 RPL29P47914 159 aaKnown RBP10.63□□□□□ -0.71
LITAF-208ENST00000571627 PSMB3P49720 205 aa10.63□□□□□ -0.71
LITAF-208ENST00000571627 DEFB1P60022 68 aa10.63□□□□□ -0.71
LITAF-208ENST00000571627 OR5C1Q8NGR4 320 aa10.63□□□□□ -0.71
LITAF-208ENST00000571627 OR11H2Q8NH07 326 aa10.63□□□□□ -0.71
LITAF-208ENST00000571627 GATAD1Q8WUU5 269 aa10.63□□□□□ -0.71
LITAF-208ENST00000571627 ASB13Q8WXK3 278 aa10.63□□□□□ -0.71
LITAF-208ENST00000571627 RARRES2Q99969 163 aa10.63□□□□□ -0.71
LITAF-208ENST00000571627 SCRT1Q9BWW7 348 aa10.63□□□□□ -0.71
LITAF-208ENST00000571627 ARV1Q9H2C2 271 aa10.63□□□□□ -0.71
LITAF-208ENST00000571627 LCE6AA0A183 80 aa10.62□□□□□ -0.71
LITAF-208ENST00000571627 CXorf65A6NEN9 183 aa10.62□□□□□ -0.71
LITAF-208ENST00000571627 COX7A2P2O60397 106 aa10.62□□□□□ -0.71
LITAF-208ENST00000571627 CXCL3P19876 107 aa10.62□□□□□ -0.71
LITAF-208ENST00000571627 FGF7P21781 194 aa10.62□□□□□ -0.71
LITAF-208ENST00000571627 OXA1LQ15070 435 aa10.62□□□□□ -0.71
LITAF-208ENST00000571627 FCN2Q15485 313 aa10.62□□□□□ -0.71
LITAF-208ENST00000571627 PATE2Q6UY27 113 aa10.62□□□□□ -0.71
LITAF-208ENST00000571627 OR1L4Q8NGR5 311 aa10.62□□□□□ -0.71
LITAF-208ENST00000571627 THAP6Q8TBB0 222 aa10.62□□□□□ -0.71
LITAF-208ENST00000571627 RSG1Q9BU20 258 aa10.62□□□□□ -0.71
LITAF-208ENST00000571627 ALMS1Q8TCU4 4167 aa10.62□□□□□ -0.71
LITAF-208ENST00000571627 ISLRO14498 428 aa10.61□□□□□ -0.71
LITAF-208ENST00000571627 ATF4P18848 351 aaPredicted RBP10.61□□□□□ -0.71
LITAF-208ENST00000571627 RPL12P30050 165 aaKnown RBP10.61□□□□□ -0.71
LITAF-208ENST00000571627 PRR20EP86478 221 aa10.61□□□□□ -0.71
LITAF-208ENST00000571627 PRR20CP86479 221 aa10.61□□□□□ -0.71
LITAF-208ENST00000571627 PRR20DP86480 221 aa10.61□□□□□ -0.71
LITAF-208ENST00000571627 PRR20BP86481 221 aa10.61□□□□□ -0.71
LITAF-208ENST00000571627 PRR20AP86496 221 aa10.61□□□□□ -0.71
LITAF-208ENST00000571627 OPCMLQ14982 345 aa10.61□□□□□ -0.71
LITAF-208ENST00000571627 C10orf113Q5VZT2 155 aa10.61□□□□□ -0.71
LITAF-208ENST00000571627 MIC13Q5XKP0 118 aa10.61□□□□□ -0.71
LITAF-208ENST00000571627 MORN3Q6PF18 240 aaPredicted RBP10.61□□□□□ -0.71
LITAF-208ENST00000571627 LINC00305Q7Z4B0 112 aa10.61□□□□□ -0.71
LITAF-208ENST00000571627 OR11H7Q8NGC8 314 aa10.61□□□□□ -0.71
LITAF-208ENST00000571627 C16orf92Q96LL3 132 aa10.61□□□□□ -0.71
LITAF-208ENST00000571627 LINC00052Q96N35 136 aa10.61□□□□□ -0.71
LITAF-208ENST00000571627 UHRF2Q96PU4 802 aa10.61□□□□□ -0.71
LITAF-208ENST00000571627 PFDN5Q99471 154 aa10.61□□□□□ -0.71
LITAF-208ENST00000571627 DNAJC4Q9NNZ3 241 aa10.61□□□□□ -0.71
LITAF-208ENST00000571627 CLEC5AQ9NY25 188 aa10.61□□□□□ -0.71
LITAF-208ENST00000571627 MBD2Q9UBB5 411 aa10.61□□□□□ -0.71
LITAF-208ENST00000571627 HSPB11Q9Y547 144 aa10.61□□□□□ -0.71
LITAF-208ENST00000571627 DNAH1Q9P2D7 4330 aa10.61□□□□□ -0.71
LITAF-208ENST00000571627 PLECQ15149 4684 aaKnown RBP10.6□□□□□ -0.71
LITAF-208ENST00000571627 SOCS3O14543 225 aa10.6□□□□□ -0.71
LITAF-208ENST00000571627 DEFB4AO15263 64 aa10.6□□□□□ -0.71
LITAF-208ENST00000571627 SPP1P10451 314 aa10.6□□□□□ -0.71
LITAF-208ENST00000571627 B2MP61769 119 aa10.6□□□□□ -0.71
LITAF-208ENST00000571627 FGL1Q08830 312 aa10.6□□□□□ -0.71
LITAF-208ENST00000571627 CLINT1Q14677 625 aa10.6□□□□□ -0.71
LITAF-208ENST00000571627 TMEM41BQ5BJD5 291 aa10.6□□□□□ -0.71
LITAF-208ENST00000571627 GDF5OSQ5U4N7 250 aa10.6□□□□□ -0.71
LITAF-208ENST00000571627 NPCDR1Q9BY65 106 aa10.6□□□□□ -0.71
LITAF-208ENST00000571627 KCNIP2Q9NS61 270 aa10.6□□□□□ -0.71
LITAF-208ENST00000571627 SLC39A9Q9NUM3 307 aa10.6□□□□□ -0.71
LITAF-208ENST00000571627 H3BMM0 161 aa10.59□□□□□ -0.71
LITAF-208ENST00000571627 GIPP09681 153 aaPredicted RBP10.59□□□□□ -0.71
LITAF-208ENST00000571627 SPATA31B1PQ5VZV4 182 aa10.59□□□□□ -0.71
LITAF-208ENST00000571627 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.59□□□□□ -0.71
LITAF-208ENST00000571627 ZNF709Q8N972 641 aa10.59□□□□□ -0.71
LITAF-208ENST00000571627 TMEM37Q8WXS4 190 aa10.59□□□□□ -0.71
LITAF-208ENST00000571627 C17orf77Q96MU5 243 aa10.59□□□□□ -0.71
LITAF-208ENST00000571627 ATP5SQ99766 215 aa10.59□□□□□ -0.71
LITAF-208ENST00000571627 PXMP4Q9Y6I8 212 aa10.59□□□□□ -0.71
LITAF-208ENST00000571627 A0A087X0K7 114 aa10.58□□□□□ -0.72
LITAF-208ENST00000571627 IGKV3-20P01619 116 aa10.58□□□□□ -0.72
LITAF-208ENST00000571627 HLA-DRB4P13762 266 aa10.58□□□□□ -0.72
LITAF-208ENST00000571627 NUTF2P61970 127 aaKnown RBP10.58□□□□□ -0.72
LITAF-208ENST00000571627 FOXI2Q6ZQN5 318 aa10.58□□□□□ -0.72
LITAF-208ENST00000571627 BPIFA4PQ86YQ2 179 aa10.58□□□□□ -0.72
LITAF-208ENST00000571627 C20orf173Q96LM9 149 aa10.58□□□□□ -0.72
LITAF-208ENST00000571627 WDR61Q9GZS3 305 aaKnown RBP10.58□□□□□ -0.72
LITAF-208ENST00000571627 RPRMQ9NS64 109 aa10.58□□□□□ -0.72
LITAF-208ENST00000571627 HLA-DRB4X5D2U9 266 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms