RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 NOP16Q9Y3C1 178 aaKnown RBP2.81□□□□□ -1.96
SMG6-208ENST00000570874 SLC25A15Q9Y619 301 aa2.81□□□□□ -1.96
SMG6-208ENST00000570874 HIVEP3Q5T1R4 2406 aa2.81□□□□□ -1.96
SMG6-208ENST00000570874 PKDREJQ9NTG1 2253 aa2.8□□□□□ -1.96
SMG6-208ENST00000570874 TRAV14DV4A0A0A6YYC5 116 aa2.8□□□□□ -1.96
SMG6-208ENST00000570874 LOC100131303A0A0U1RQF7 123 aa2.8□□□□□ -1.96
SMG6-208ENST00000570874 H0YJW9 148 aa2.8□□□□□ -1.96
SMG6-208ENST00000570874 SDCBPO00560 298 aaPredicted RBP2.8□□□□□ -1.96
SMG6-208ENST00000570874 GEMIN2O14893 280 aaKnown RBP2.8□□□□□ -1.96
SMG6-208ENST00000570874 NPFFO15130 113 aa2.8□□□□□ -1.96
SMG6-208ENST00000570874 SFT2D2O95562 160 aa2.8□□□□□ -1.96
SMG6-208ENST00000570874 NCR2O95944 276 aa2.8□□□□□ -1.96
SMG6-208ENST00000570874 CXorf1O96002 111 aa2.8□□□□□ -1.96
SMG6-208ENST00000570874 IGLV1-44P01699 117 aa2.8□□□□□ -1.96
SMG6-208ENST00000570874 HLA-DRB1P01911 266 aa2.8□□□□□ -1.96
SMG6-208ENST00000570874 SEC11BP0C7V7 166 aa2.8□□□□□ -1.96
SMG6-208ENST00000570874 LINC00694P0DN24 101 aa2.8□□□□□ -1.96
SMG6-208ENST00000570874 IL2RGP31785 369 aa2.8□□□□□ -1.96
SMG6-208ENST00000570874 OPRM1P35372 400 aa2.8□□□□□ -1.96
SMG6-208ENST00000570874 MYCNOSP40205 109 aa2.8□□□□□ -1.96
SMG6-208ENST00000570874 TPPP2P59282 170 aa2.8□□□□□ -1.96
SMG6-208ENST00000570874 SRPXP78539 464 aa2.8□□□□□ -1.96
SMG6-208ENST00000570874 HLA-DRB3P79483 266 aa2.8□□□□□ -1.96
SMG6-208ENST00000570874 IQCJQ1A5X6 159 aa2.8□□□□□ -1.96
SMG6-208ENST00000570874 C12orf74Q32Q52 190 aa2.8□□□□□ -1.96
SMG6-208ENST00000570874 MIDNQ504T8 468 aa2.8□□□□□ -1.96
SMG6-208ENST00000570874 LRRC10Q5BKY1 277 aa2.8□□□□□ -1.96
SMG6-208ENST00000570874 LYRM7Q5U5X0 104 aa2.8□□□□□ -1.96
SMG6-208ENST00000570874 HRCT1Q6UXD1 115 aa2.8□□□□□ -1.96
SMG6-208ENST00000570874 Q6ZN92 141 aa2.8□□□□□ -1.96
SMG6-208ENST00000570874 Q6ZR03 302 aa2.8□□□□□ -1.96
SMG6-208ENST00000570874 ZNF826PQ6ZT77 177 aa2.8□□□□□ -1.96
SMG6-208ENST00000570874 SLC25A26Q70HW3 274 aa2.8□□□□□ -1.96
SMG6-208ENST00000570874 EXOC3-AS1Q8N2X6 119 aa2.8□□□□□ -1.96
SMG6-208ENST00000570874 OR10D4PQ8NGN7 298 aa2.8□□□□□ -1.96
SMG6-208ENST00000570874 OR2T6Q8NHC8 308 aa2.8□□□□□ -1.96
SMG6-208ENST00000570874 ABHD14BQ96IU4 210 aa2.8□□□□□ -1.96
SMG6-208ENST00000570874 FAM19A4Q96LR4 140 aa2.8□□□□□ -1.96
SMG6-208ENST00000570874 C2orf50Q96LR7 162 aa2.8□□□□□ -1.96
SMG6-208ENST00000570874 SLC25A31Q9H0C2 315 aa2.8□□□□□ -1.96
SMG6-208ENST00000570874 LIME1Q9H400 295 aa2.8□□□□□ -1.96
SMG6-208ENST00000570874 GNB4Q9HAV0 340 aa2.8□□□□□ -1.96
SMG6-208ENST00000570874 KCNIP2Q9NS61 270 aa2.8□□□□□ -1.96
SMG6-208ENST00000570874 C19orf73Q9NVV2 129 aa2.8□□□□□ -1.96
SMG6-208ENST00000570874 ZNF586Q9NXT0 402 aa2.8□□□□□ -1.96
SMG6-208ENST00000570874 AK3Q9UIJ7 227 aa2.8□□□□□ -1.96
SMG6-208ENST00000570874 VSIG4Q9Y279 399 aa2.8□□□□□ -1.96
SMG6-208ENST00000570874 ZNF835Q9Y2P0 537 aa2.8□□□□□ -1.96
SMG6-208ENST00000570874 SELENOKQ9Y6D0 94 aa2.8□□□□□ -1.96
SMG6-208ENST00000570874 DMXL2Q8TDJ6 3036 aa2.8□□□□□ -1.96
SMG6-208ENST00000570874 UNC79Q9P2D8 2635 aa2.8□□□□□ -1.96
SMG6-208ENST00000570874 ARID1AO14497 2285 aa2.8□□□□□ -1.96
SMG6-208ENST00000570874 PLXNB1O43157 2135 aa2.8□□□□□ -1.96
SMG6-208ENST00000570874 ABCA4P78363 2273 aa2.79□□□□□ -1.96
SMG6-208ENST00000570874 BOD1L1Q8NFC6 3051 aa2.79□□□□□ -1.96
SMG6-208ENST00000570874 MALRD1Q5VYJ5 2156 aa2.79□□□□□ -1.96
SMG6-208ENST00000570874 SAA2-SAA4A0A096LPE2 208 aa2.79□□□□□ -1.96
SMG6-208ENST00000570874 PLAC8L1A1L4L8 177 aa2.79□□□□□ -1.96
SMG6-208ENST00000570874 COLCA2A8K830 154 aa2.79□□□□□ -1.96
SMG6-208ENST00000570874 ZNF705EA8MWA4 302 aaPredicted RBP2.79□□□□□ -1.96
SMG6-208ENST00000570874 IQCF6A8MYZ5 107 aa2.79□□□□□ -1.96
SMG6-208ENST00000570874 B4DEV8 164 aa2.79□□□□□ -1.96
SMG6-208ENST00000570874 GGTLC3B5MD39 225 aa2.79□□□□□ -1.96
SMG6-208ENST00000570874 UMAD1C9J7I0 102 aa2.79□□□□□ -1.96
SMG6-208ENST00000570874 PDCD6O75340 191 aa2.79□□□□□ -1.96
SMG6-208ENST00000570874 CDK2AP2O75956 126 aa2.79□□□□□ -1.96
SMG6-208ENST00000570874 SIX6O95475 246 aa2.79□□□□□ -1.96
SMG6-208ENST00000570874 IGKV3-15P01624 115 aa2.79□□□□□ -1.96
SMG6-208ENST00000570874 CD55P08174 381 aa2.79□□□□□ -1.96
SMG6-208ENST00000570874 IGLC6P0CF74 106 aa2.79□□□□□ -1.96
SMG6-208ENST00000570874 PI3P19957 117 aa2.79□□□□□ -1.96
SMG6-208ENST00000570874 PPP1CCP36873 323 aaKnown RBP2.79□□□□□ -1.96
SMG6-208ENST00000570874 LPAR6P43657 344 aa2.79□□□□□ -1.96
SMG6-208ENST00000570874 RPL29P47914 159 aaKnown RBP2.79□□□□□ -1.96
SMG6-208ENST00000570874 ATP5G3P48201 142 aa2.79□□□□□ -1.96
SMG6-208ENST00000570874 RBM11P57052 281 aaKnown RBP2.79□□□□□ -1.96
SMG6-208ENST00000570874 HERV-K104P61576 105 aa2.79□□□□□ -1.96
SMG6-208ENST00000570874 SLC38A11Q08AI6 406 aa2.79□□□□□ -1.96
SMG6-208ENST00000570874 DAZ2Q13117 558 aaKnown RBP2.79□□□□□ -1.96
SMG6-208ENST00000570874 MEIG1Q5JSS6 88 aa2.79□□□□□ -1.96
SMG6-208ENST00000570874 FAM53AQ6NSI3 398 aaPredicted RBP2.79□□□□□ -1.96
SMG6-208ENST00000570874 PCSK4Q6UW60 755 aa2.79□□□□□ -1.96
SMG6-208ENST00000570874 DPPA3Q6W0C5 159 aa2.79□□□□□ -1.96
SMG6-208ENST00000570874 ZNF705AQ6ZN79 300 aaPredicted RBP2.79□□□□□ -1.96
SMG6-208ENST00000570874 FOXI2Q6ZQN5 318 aa2.79□□□□□ -1.96
SMG6-208ENST00000570874 DAZ4Q86SG3 579 aaKnown RBP2.79□□□□□ -1.96
SMG6-208ENST00000570874 TTC9CQ8N5M4 171 aa2.79□□□□□ -1.96
SMG6-208ENST00000570874 UBALD1Q8TB05 177 aa2.79□□□□□ -1.96
SMG6-208ENST00000570874 Q8TCH9 128 aa2.79□□□□□ -1.96
SMG6-208ENST00000570874 KLF14Q8TD94 323 aaPredicted RBP2.79□□□□□ -1.96
SMG6-208ENST00000570874 FRZBQ92765 325 aa2.79□□□□□ -1.96
SMG6-208ENST00000570874 NEUROG1Q92886 237 aa2.79□□□□□ -1.96
SMG6-208ENST00000570874 C18orf12Q96KH6 178 aa2.79□□□□□ -1.96
SMG6-208ENST00000570874 ADAT1Q9BUB4 502 aaKnown RBP2.79□□□□□ -1.96
SMG6-208ENST00000570874 GGTLC1Q9BX51 225 aa2.79□□□□□ -1.96
SMG6-208ENST00000570874 MRPL32Q9BYC8 188 aaKnown RBP2.79□□□□□ -1.96
SMG6-208ENST00000570874 TMEM191AQ9H0A3 160 aa2.79□□□□□ -1.96
SMG6-208ENST00000570874 CST11Q9H112 138 aa2.79□□□□□ -1.96
SMG6-208ENST00000570874 MAP6D1Q9H9H5 199 aa2.79□□□□□ -1.96
SMG6-208ENST00000570874 PLEKHA3Q9HB20 300 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms